Gene annotation
Transcriptome id Sobic.006G130800.1
Synonym Sb06g021070, INT1, ATINT1
Functional annotation transporter family protein, putative, expressed
UniProt C5YBD4
Pfam PF07690
Panther DB PTHR24064 PTHR24064:SF113
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology K08150; SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G43330 : inositol transporter 1
RAP-DB (Rice) LOC_Os04g41460.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056363
Brachypodium KQJ83340 , KQJ83341 , KQJ83342
Barley HORVU2Hr1G085160.4 , HORVU2Hr1G085160.5 , HORVU2Hr1G085160.6 , HORVU2Hr1G085160.7 , HORVU2Hr1G085160.1 , HORVU2Hr1G085160.2 , HORVU2Hr1G085160.3 , HORVU2Hr1G085160.8 , HORVU2Hr1G085160.9
Wheat TraesCS2D02G348200 , TraesCS2A02G349800 , TraesCS2B02G368200 , TraesCS2B02G368200 , TraesCS2D02G348200
Populus -


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cDNA sequences
Sobic.006G130800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
2 Sobic.001G186800 ATPAP18/PAP18, putative, expressed -
3 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
4 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
5 Sobic.001G064000 expressed protein -
6 Sobic.001G048100 OsAPRL5 adenosine 5\'-phosphosulfate reductase-like OsAPRL5, expressed -
7 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
8 Sobic.003G290100 dual specificity protein phosphatase, putative, expressed -
9 Sobic.001G339500 expressed protein -
10 Sobic.006G086500 STE_MEKK_ste11_MAP3K.16 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
11 Sobic.009G238850 - -
12 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
13 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
14 Sobic.001G222250 - -
15 Sobic.010G156000 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
17 Sobic.009G084500 ethylene-responsive protein related, putative, expressed -
18 Sobic.002G148750 - -
19 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
20 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein


Gene co-expression network
sample Sobic006G130800 Sobic006G130800 Sobic001G043800 Sobic001G043800 Sobic006G130800--Sobic001G043800 Sobic001G186800 Sobic001G186800 Sobic006G130800--Sobic001G186800 Sobic002G134600 Sobic002G134600 Sobic006G130800--Sobic002G134600 Sobic002G294800 Sobic002G294800 Sobic006G130800--Sobic002G294800 Sobic001G064000 Sobic001G064000 Sobic006G130800--Sobic001G064000 Sobic001G048100 Sobic001G048100 Sobic006G130800--Sobic001G048100 Sobic002G122600 Sobic002G122600 Sobic006G130800--Sobic002G122600 Sobic003G290100 Sobic003G290100 Sobic006G130800--Sobic003G290100 Sobic001G339500 Sobic001G339500 Sobic006G130800--Sobic001G339500 Sobic007G136800 Sobic007G136800 Sobic001G043800--Sobic007G136800 Sobic001G043800--Sobic006G130800 Sobic004G086700 Sobic004G086700 Sobic001G043800--Sobic004G086700 Sobic002G218500 Sobic002G218500 Sobic001G043800--Sobic002G218500 Sobic001G102500 Sobic001G102500 Sobic001G043800--Sobic001G102500 Sobic006G031800 Sobic006G031800 Sobic001G043800--Sobic006G031800 Sobic007G029700 Sobic007G029700 Sobic001G043800--Sobic007G029700 Sobic001G053000 Sobic001G053000 Sobic001G043800--Sobic001G053000 Sobic002G431300 Sobic002G431300 Sobic001G043800--Sobic002G431300 Sobic001G186800--Sobic002G294800 Sobic004G021200 Sobic004G021200 Sobic001G186800--Sobic004G021200 Sobic003G141500 Sobic003G141500 Sobic001G186800--Sobic003G141500 Sobic006G200600 Sobic006G200600 Sobic001G186800--Sobic006G200600 Sobic001G281600 Sobic001G281600 Sobic001G186800--Sobic001G281600 Sobic003G138500 Sobic003G138500 Sobic001G186800--Sobic003G138500 Sobic010G262000 Sobic010G262000 Sobic001G186800--Sobic010G262000 Sobic009G199200 Sobic009G199200 Sobic001G186800--Sobic009G199200 Sobic005G027400 Sobic005G027400 Sobic001G186800--Sobic005G027400 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G134600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic002G294800--Sobic005G027400 Sobic001G241100 Sobic001G241100 Sobic002G294800--Sobic001G241100 Sobic003G355900 Sobic003G355900 Sobic002G294800--Sobic003G355900 Sobic002G211800 Sobic002G211800 Sobic002G294800--Sobic002G211800 Sobic005G059800 Sobic005G059800 Sobic002G294800--Sobic005G059800 Sobic001G261501 Sobic001G261501 Sobic002G294800--Sobic001G261501 Sobic010G032900 Sobic010G032900 Sobic002G294800--Sobic010G032900 Sobic001G389100 Sobic001G389100 Sobic002G294800--Sobic001G389100 Sobic010G013200 Sobic010G013200 Sobic002G294800--Sobic010G013200 Sobic001G064000--Sobic007G029700 Sobic010G145800 Sobic010G145800 Sobic001G064000--Sobic010G145800 Sobic007G203200 Sobic007G203200 Sobic001G064000--Sobic007G203200 Sobic010G237900 Sobic010G237900 Sobic001G064000--Sobic010G237900 Sobic001G064000--Sobic007G136800 Sobic001G064000--Sobic006G130800 Sobic001G064000--Sobic001G043800 Sobic007G095500 Sobic007G095500 Sobic001G064000--Sobic007G095500 Sobic001G250700 Sobic001G250700 Sobic001G064000--Sobic001G250700 Sobic001G080700 Sobic001G080700 Sobic001G048100--Sobic001G080700 Sobic010G184100 Sobic010G184100 Sobic001G048100--Sobic010G184100 Sobic009G165800 Sobic009G165800 Sobic001G048100--Sobic009G165800 Sobic004G121100 Sobic004G121100 Sobic001G048100--Sobic004G121100 Sobic007G171400 Sobic007G171400 Sobic001G048100--Sobic007G171400 Sobic010G251000 Sobic010G251000 Sobic001G048100--Sobic010G251000 Sobic004G040900 Sobic004G040900 Sobic001G048100--Sobic004G040900 Sobic003G264200 Sobic003G264200 Sobic001G048100--Sobic003G264200 Sobic004G269000 Sobic004G269000 Sobic001G048100--Sobic004G269000 Sobic002G122600--Sobic001G281600 Sobic009G215800 Sobic009G215800 Sobic002G122600--Sobic009G215800 Sobic010G268300 Sobic010G268300 Sobic002G122600--Sobic010G268300 Sobic002G309800 Sobic002G309800 Sobic002G122600--Sobic002G309800 Sobic004G083700 Sobic004G083700 Sobic002G122600--Sobic004G083700 Sobic001G429300 Sobic001G429300 Sobic002G122600--Sobic001G429300 Sobic003G078800 Sobic003G078800 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400 Sobic003G290100--Sobic006G130800 Sobic010G156000 Sobic010G156000 Sobic003G290100--Sobic010G156000 Sobic003G162000 Sobic003G162000 Sobic003G290100--Sobic003G162000 Sobic003G141000 Sobic003G141000 Sobic003G290100--Sobic003G141000 Sobic001G541100 Sobic001G541100 Sobic003G290100--Sobic001G541100 Sobic005G026100 Sobic005G026100 Sobic003G290100--Sobic005G026100 Sobic006G027000 Sobic006G027000 Sobic003G290100--Sobic006G027000 Sobic003G403500 Sobic003G403500 Sobic003G290100--Sobic003G403500 Sobic003G290100--Sobic001G339500 Sobic002G339600 Sobic002G339600 Sobic001G339500--Sobic002G339600 Sobic002G111200 Sobic002G111200 Sobic001G339500--Sobic002G111200 Sobic003G349200 Sobic003G349200 Sobic001G339500--Sobic003G349200 Sobic006G215600 Sobic006G215600 Sobic001G339500--Sobic006G215600 Sobic004G295300 Sobic004G295300 Sobic001G339500--Sobic004G295300 Sobic007G033800 Sobic007G033800 Sobic001G339500--Sobic007G033800 Sobic006G011300 Sobic006G011300 Sobic001G339500--Sobic006G011300 Sobic003G224100 Sobic003G224100 Sobic001G339500--Sobic003G224100 Sobic001G339500--Sobic006G130800
Octagon: transcription factors


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