Gene annotation
Transcriptome id Sobic.003G290100.1
Synonym Sb03g034070
Functional annotation dual specificity protein phosphatase, putative, expressed
UniProt C5XJ73
Pfam PF00782
Panther DB PTHR10159 PTHR10159:SF387
NCBI CDD KOG1719; Dual specificity phosphatase
KEGG Orthology -
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation


Orthologs (automatic annotation)
TAIR AT2G35680 : Phosphotyrosine protein phosphatases superfamily protein
RAP-DB (Rice) LOC_Os01g53710.1 : dual specificity protein phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a010935 , Zm00025a027668 , Zm00025a042465
Brachypodium KQK09642
Barley HORVU3Hr1G070340.3 , HORVU3Hr1G070340.2 , HORVU3Hr1G070340.5 , HORVU3Hr1G070340.4 , HORVU3Hr1G070340.7 , HORVU3Hr1G070340.6 , HORVU3Hr1G070340.9 , HORVU3Hr1G070340.8 , HORVU3Hr1G070340.11 , HORVU3Hr1G070340.10 , HORVU3Hr1G070340.13 , HORVU3Hr1G070340.12
Wheat TraesCS3D02G277800 , TraesCS3B02G311700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
2 Sobic.010G156000 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.003G162000 - K00878: hydroxyethylthiazole kinase
4 Sobic.003G141000 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
5 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
6 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
7 Sobic.006G027000 expressed protein -
8 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
9 Sobic.001G339500 expressed protein -
10 Sobic.004G028000 expressed protein -
11 Sobic.004G327800 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
12 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
13 Sobic.010G265800 tyrosine protein kinase domain containing protein, putative, expressed -
14 Sobic.001G407600 plastid-targeted omega-3 fatty acid desaturase(PubMedID : 31661847)@omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
15 Sobic.009G219900 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
16 Sobic.002G367100 protein of unknown function DUF1675 domain containing protein, expressed -
17 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
18 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
19 Sobic.002G281800 expressed protein -
20 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase


Gene co-expression network
sample Sobic003G290100 Sobic003G290100 Sobic006G130800 Sobic006G130800 Sobic003G290100--Sobic006G130800 Sobic010G156000 Sobic010G156000 Sobic003G290100--Sobic010G156000 Sobic003G162000 Sobic003G162000 Sobic003G290100--Sobic003G162000 Sobic003G141000 Sobic003G141000 Sobic003G290100--Sobic003G141000 Sobic001G541100 Sobic001G541100 Sobic003G290100--Sobic001G541100 Sobic005G026100 Sobic005G026100 Sobic003G290100--Sobic005G026100 Sobic006G027000 Sobic006G027000 Sobic003G290100--Sobic006G027000 Sobic003G403500 Sobic003G403500 Sobic003G290100--Sobic003G403500 Sobic001G339500 Sobic001G339500 Sobic003G290100--Sobic001G339500 Sobic001G043800 Sobic001G043800 Sobic006G130800--Sobic001G043800 Sobic001G186800 Sobic001G186800 Sobic006G130800--Sobic001G186800 Sobic002G134600 Sobic002G134600 Sobic006G130800--Sobic002G134600 Sobic002G294800 Sobic002G294800 Sobic006G130800--Sobic002G294800 Sobic001G064000 Sobic001G064000 Sobic006G130800--Sobic001G064000 Sobic001G048100 Sobic001G048100 Sobic006G130800--Sobic001G048100 Sobic002G122600 Sobic002G122600 Sobic006G130800--Sobic002G122600 Sobic006G130800--Sobic003G290100 Sobic006G130800--Sobic001G339500 Sobic002G279700 Sobic002G279700 Sobic010G156000--Sobic002G279700 Sobic002G128900 Sobic002G128900 Sobic010G156000--Sobic002G128900 Sobic001G412100 Sobic001G412100 Sobic010G156000--Sobic001G412100 Sobic010G156000--Sobic006G130800 Sobic010G024100 Sobic010G024100 Sobic010G156000--Sobic010G024100 Sobic010G156000--Sobic001G048100 Sobic010G156000--Sobic003G290100 Sobic010G140600 Sobic010G140600 Sobic010G156000--Sobic010G140600 Sobic010G265300 Sobic010G265300 Sobic010G156000--Sobic010G265300 Sobic002G072600 Sobic002G072600 Sobic003G162000--Sobic002G072600 Sobic003G162000--Sobic003G290100 Sobic003G162000--Sobic010G156000 Sobic004G337200 Sobic004G337200 Sobic003G162000--Sobic004G337200 Sobic003G162000--Sobic006G130800 Sobic003G162000--Sobic006G027000 Sobic010G080300 Sobic010G080300 Sobic003G162000--Sobic010G080300 Sobic003G162000--Sobic001G541100 Sobic003G162000--Sobic001G412100 Sobic001G450700 Sobic001G450700 Sobic003G141000--Sobic001G450700 Sobic007G169200 Sobic007G169200 Sobic003G141000--Sobic007G169200 Sobic001G410100 Sobic001G410100 Sobic003G141000--Sobic001G410100 Sobic002G207300 Sobic002G207300 Sobic003G141000--Sobic002G207300 Sobic001G386000 Sobic001G386000 Sobic003G141000--Sobic001G386000 Sobic001G436000 Sobic001G436000 Sobic003G141000--Sobic001G436000 Sobic007G196600 Sobic007G196600 Sobic003G141000--Sobic007G196600 Sobic003G141000--Sobic003G290100 Sobic007G006600 Sobic007G006600 Sobic003G141000--Sobic007G006600 Sobic009G219000 Sobic009G219000 Sobic001G541100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic001G541100--Sobic001G323000 Sobic009G219900 Sobic009G219900 Sobic001G541100--Sobic009G219900 Sobic009G138100 Sobic009G138100 Sobic001G541100--Sobic009G138100 Sobic006G209400 Sobic006G209400 Sobic001G541100--Sobic006G209400 Sobic001G395400 Sobic001G395400 Sobic001G541100--Sobic001G395400 Sobic010G130000 Sobic010G130000 Sobic001G541100--Sobic010G130000 Sobic001G105500 Sobic001G105500 Sobic001G541100--Sobic001G105500 Sobic001G541100--Sobic002G134600 Sobic004G146800 Sobic004G146800 Sobic005G026100--Sobic004G146800 Sobic005G026100--Sobic006G209400 Sobic009G231200 Sobic009G231200 Sobic005G026100--Sobic009G231200 Sobic010G267500 Sobic010G267500 Sobic005G026100--Sobic010G267500 Sobic005G026100--Sobic001G541100 Sobic001G391600 Sobic001G391600 Sobic005G026100--Sobic001G391600 Sobic009G200800 Sobic009G200800 Sobic005G026100--Sobic009G200800 Sobic001G333600 Sobic001G333600 Sobic005G026100--Sobic001G333600 Sobic008G188700 Sobic008G188700 Sobic005G026100--Sobic008G188700 Sobic006G171700 Sobic006G171700 Sobic006G027000--Sobic006G171700 Sobic007G097900 Sobic007G097900 Sobic006G027000--Sobic007G097900 Sobic006G027000--Sobic003G162000 Sobic006G027000--Sobic002G134600 Sobic006G027000--Sobic003G290100 Sobic006G027000--Sobic001G541100 Sobic002G418700 Sobic002G418700 Sobic006G027000--Sobic002G418700 Sobic006G119800 Sobic006G119800 Sobic006G027000--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic006G027000--Sobic001G387600 Sobic002G001000 Sobic002G001000 Sobic003G403500--Sobic002G001000 Sobic001G500800 Sobic001G500800 Sobic003G403500--Sobic001G500800 Sobic003G375900 Sobic003G375900 Sobic003G403500--Sobic003G375900 Sobic002G367100 Sobic002G367100 Sobic003G403500--Sobic002G367100 Sobic003G002600 Sobic003G002600 Sobic003G403500--Sobic003G002600 Sobic004G201700 Sobic004G201700 Sobic003G403500--Sobic004G201700 Sobic004G131900 Sobic004G131900 Sobic003G403500--Sobic004G131900 Sobic002G200700 Sobic002G200700 Sobic003G403500--Sobic002G200700 Sobic004G340800 Sobic004G340800 Sobic003G403500--Sobic004G340800 Sobic002G339600 Sobic002G339600 Sobic001G339500--Sobic002G339600 Sobic002G111200 Sobic002G111200 Sobic001G339500--Sobic002G111200 Sobic003G349200 Sobic003G349200 Sobic001G339500--Sobic003G349200 Sobic006G215600 Sobic006G215600 Sobic001G339500--Sobic006G215600 Sobic004G295300 Sobic004G295300 Sobic001G339500--Sobic004G295300 Sobic007G033800 Sobic007G033800 Sobic001G339500--Sobic007G033800 Sobic006G011300 Sobic006G011300 Sobic001G339500--Sobic006G011300 Sobic003G224100 Sobic003G224100 Sobic001G339500--Sobic003G224100 Sobic001G339500--Sobic006G130800
Octagon: transcription factors


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