Gene annotation
Transcriptome id Sobic.003G162000.1
Synonym Sb03g014470
Functional annotation -
UniProt C5XKI5
Pfam PF02110
Panther DB PTHR20857 PTHR20857:SF19
NCBI CDD -
KEGG Orthology K00878; hydroxyethylthiazole kinase
Gene Ontology GO:0009228; thiamine biosynthetic process GO:0004417hydroxyethylthiazole kinase activity


Orthologs (automatic annotation)
TAIR AT3G24030 : hydroxyethylthiazole kinase family protein
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a036267
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G162000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G072600 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
2 Sobic.003G290100 dual specificity protein phosphatase, putative, expressed -
3 Sobic.010G156000 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.004G337200 dehydrogenase, putative, expressed -
5 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
6 Sobic.006G027000 expressed protein -
7 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
8 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
9 Sobic.001G412100 CDP-alcohol phosphatidyltransferase, putative, expressed K00995: pgsA, CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase
10 Sobic.008G144800 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
11 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
12 Sobic.002G281800 expressed protein -
13 Sobic.002G367100 protein of unknown function DUF1675 domain containing protein, expressed -
14 Sobic.010G024100 tRNA 2-phosphotransferase 1, putative, expressed K10669: TRPT1, 2'-phosphotransferase
15 Sobic.001G447600 squalene monooxygenase, putative, expressed K00511: SQLE, squalene monooxygenase
16 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
17 Sobic.005G168600 NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
18 Sobic.008G161700 homocysteine S-methyltransferase protein, putative, expressed K00547: mmuM, homocysteine S-methyltransferase
19 Sobic.002G128900 thioesterase family protein, putative, expressed -
20 Sobic.002G139100 lipase, putative, expressed -


Gene co-expression network
sample Sobic003G162000 Sobic003G162000 Sobic002G072600 Sobic002G072600 Sobic003G162000--Sobic002G072600 Sobic003G290100 Sobic003G290100 Sobic003G162000--Sobic003G290100 Sobic010G156000 Sobic010G156000 Sobic003G162000--Sobic010G156000 Sobic004G337200 Sobic004G337200 Sobic003G162000--Sobic004G337200 Sobic006G130800 Sobic006G130800 Sobic003G162000--Sobic006G130800 Sobic006G027000 Sobic006G027000 Sobic003G162000--Sobic006G027000 Sobic010G080300 Sobic010G080300 Sobic003G162000--Sobic010G080300 Sobic001G541100 Sobic001G541100 Sobic003G162000--Sobic001G541100 Sobic001G412100 Sobic001G412100 Sobic003G162000--Sobic001G412100 Sobic002G072600--Sobic003G162000 Sobic002G072600--Sobic010G156000 Sobic002G134600 Sobic002G134600 Sobic002G072600--Sobic002G134600 Sobic004G311900 Sobic004G311900 Sobic002G072600--Sobic004G311900 Sobic006G073200 Sobic006G073200 Sobic002G072600--Sobic006G073200 Sobic004G246900 Sobic004G246900 Sobic002G072600--Sobic004G246900 Sobic008G161700 Sobic008G161700 Sobic002G072600--Sobic008G161700 Sobic001G362200 Sobic001G362200 Sobic002G072600--Sobic001G362200 Sobic006G032900 Sobic006G032900 Sobic002G072600--Sobic006G032900 Sobic003G290100--Sobic006G130800 Sobic003G290100--Sobic010G156000 Sobic003G290100--Sobic003G162000 Sobic003G141000 Sobic003G141000 Sobic003G290100--Sobic003G141000 Sobic003G290100--Sobic001G541100 Sobic005G026100 Sobic005G026100 Sobic003G290100--Sobic005G026100 Sobic003G290100--Sobic006G027000 Sobic003G403500 Sobic003G403500 Sobic003G290100--Sobic003G403500 Sobic001G339500 Sobic001G339500 Sobic003G290100--Sobic001G339500 Sobic002G279700 Sobic002G279700 Sobic010G156000--Sobic002G279700 Sobic002G128900 Sobic002G128900 Sobic010G156000--Sobic002G128900 Sobic010G156000--Sobic001G412100 Sobic010G156000--Sobic006G130800 Sobic010G024100 Sobic010G024100 Sobic010G156000--Sobic010G024100 Sobic001G048100 Sobic001G048100 Sobic010G156000--Sobic001G048100 Sobic010G156000--Sobic003G290100 Sobic010G140600 Sobic010G140600 Sobic010G156000--Sobic010G140600 Sobic010G265300 Sobic010G265300 Sobic010G156000--Sobic010G265300 Sobic001G270400 Sobic001G270400 Sobic004G337200--Sobic001G270400 Sobic003G116900 Sobic003G116900 Sobic004G337200--Sobic003G116900 Sobic001G121200 Sobic001G121200 Sobic004G337200--Sobic001G121200 Sobic001G296900 Sobic001G296900 Sobic004G337200--Sobic001G296900 Sobic004G266400 Sobic004G266400 Sobic004G337200--Sobic004G266400 Sobic002G364800 Sobic002G364800 Sobic004G337200--Sobic002G364800 Sobic006G160300 Sobic006G160300 Sobic004G337200--Sobic006G160300 Sobic005G203800 Sobic005G203800 Sobic004G337200--Sobic005G203800 Sobic006G034000 Sobic006G034000 Sobic004G337200--Sobic006G034000 Sobic001G043800 Sobic001G043800 Sobic006G130800--Sobic001G043800 Sobic001G186800 Sobic001G186800 Sobic006G130800--Sobic001G186800 Sobic006G130800--Sobic002G134600 Sobic002G294800 Sobic002G294800 Sobic006G130800--Sobic002G294800 Sobic001G064000 Sobic001G064000 Sobic006G130800--Sobic001G064000 Sobic006G130800--Sobic001G048100 Sobic002G122600 Sobic002G122600 Sobic006G130800--Sobic002G122600 Sobic006G130800--Sobic003G290100 Sobic006G130800--Sobic001G339500 Sobic006G171700 Sobic006G171700 Sobic006G027000--Sobic006G171700 Sobic007G097900 Sobic007G097900 Sobic006G027000--Sobic007G097900 Sobic006G027000--Sobic003G162000 Sobic006G027000--Sobic002G134600 Sobic006G027000--Sobic003G290100 Sobic006G027000--Sobic001G541100 Sobic002G418700 Sobic002G418700 Sobic006G027000--Sobic002G418700 Sobic006G119800 Sobic006G119800 Sobic006G027000--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic006G027000--Sobic001G387600 Sobic002G281800 Sobic002G281800 Sobic010G080300--Sobic002G281800 Sobic008G193300 Sobic008G193300 Sobic010G080300--Sobic008G193300 Sobic003G125400 Sobic003G125400 Sobic010G080300--Sobic003G125400 Sobic007G046500 Sobic007G046500 Sobic010G080300--Sobic007G046500 Sobic008G063200 Sobic008G063200 Sobic010G080300--Sobic008G063200 Sobic008G144800 Sobic008G144800 Sobic010G080300--Sobic008G144800 Sobic005G072200 Sobic005G072200 Sobic010G080300--Sobic005G072200 Sobic007G029100 Sobic007G029100 Sobic010G080300--Sobic007G029100 Sobic003G310100 Sobic003G310100 Sobic010G080300--Sobic003G310100 Sobic009G219000 Sobic009G219000 Sobic001G541100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic001G541100--Sobic001G323000 Sobic009G219900 Sobic009G219900 Sobic001G541100--Sobic009G219900 Sobic009G138100 Sobic009G138100 Sobic001G541100--Sobic009G138100 Sobic006G209400 Sobic006G209400 Sobic001G541100--Sobic006G209400 Sobic001G395400 Sobic001G395400 Sobic001G541100--Sobic001G395400 Sobic010G130000 Sobic010G130000 Sobic001G541100--Sobic010G130000 Sobic001G105500 Sobic001G105500 Sobic001G541100--Sobic001G105500 Sobic001G541100--Sobic002G134600 Sobic005G160400 Sobic005G160400 Sobic001G412100--Sobic005G160400 Sobic007G165900 Sobic007G165900 Sobic001G412100--Sobic007G165900 Sobic001G412100--Sobic010G265300 Sobic004G257100 Sobic004G257100 Sobic001G412100--Sobic004G257100 Sobic001G412100--Sobic010G156000 Sobic008G087900 Sobic008G087900 Sobic001G412100--Sobic008G087900 Sobic002G301000 Sobic002G301000 Sobic001G412100--Sobic002G301000 Sobic001G031100 Sobic001G031100 Sobic001G412100--Sobic001G031100 Sobic007G095500 Sobic007G095500 Sobic001G412100--Sobic007G095500
Octagon: transcription factors


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