Gene annotation
Transcriptome id Sobic.010G080300.1
Synonym Sb10g006970
Functional annotation peptidase, putative, expressed
UniProt C5Z6F3
Pfam PF07687 PF01546
Panther DB PTHR11014 PTHR11014:SF56
NCBI CDD KOG2275; Aminoacylase ACY1 and related metalloexopeptidases
KEGG Orthology K01436; amidohydrolase
Gene Ontology GO:0016787; hydrolase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G44820 : Peptidase M20/M25/M40 family protein
RAP-DB (Rice) LOC_Os06g10770.1 : peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a042507
Brachypodium KQK19046
Barley HORVU7Hr1G035450.2 , HORVU7Hr1G035450.1
Wheat TraesCS7A02G169400 , TraesCS7D02G170500 , TraesCS7B02G074400
Populus -


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cDNA sequences
Sobic.010G080300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281800 expressed protein -
2 Sobic.008G193300 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@"OsSUT2(Ortholog in rice:Eom et al., 2011)"(PubMedID : 31659914)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
3 Sobic.003G125400 Fe-S metabolism associated domain containing protein, expressed -
4 Sobic.007G046500 60S ribosomal protein L18a-1, putative, expressed -
5 Sobic.008G063200 expressed protein -
6 Sobic.008G144800 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
7 Sobic.005G072200 lipase, putative, expressed -
8 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
9 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
10 Sobic.002G404200 F-box domain containing protein, expressed -
11 Sobic.002G142066 - K18045: SIW14, tyrosine-protein phosphatase SIW14
12 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
13 Sobic.002G128900 thioesterase family protein, putative, expressed -
14 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
15 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
16 Sobic.010G140600 bolA, putative, expressed -
17 Sobic.004G152100 expressed protein -
18 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
19 Sobic.002G056800 YGGT family protein, putative, expressed -
20 Sobic.004G301200 kinesin motor domain containing protein, expressed K11498: centromeric protein E


Gene co-expression network
sample Sobic010G080300 Sobic010G080300 Sobic002G281800 Sobic002G281800 Sobic010G080300--Sobic002G281800 Sobic008G193300 Sobic008G193300 Sobic010G080300--Sobic008G193300 Sobic003G125400 Sobic003G125400 Sobic010G080300--Sobic003G125400 Sobic007G046500 Sobic007G046500 Sobic010G080300--Sobic007G046500 Sobic008G063200 Sobic008G063200 Sobic010G080300--Sobic008G063200 Sobic008G144800 Sobic008G144800 Sobic010G080300--Sobic008G144800 Sobic005G072200 Sobic005G072200 Sobic010G080300--Sobic005G072200 Sobic007G029100 Sobic007G029100 Sobic010G080300--Sobic007G029100 Sobic003G310100 Sobic003G310100 Sobic010G080300--Sobic003G310100 Sobic002G281800--Sobic010G080300 Sobic003G291400 Sobic003G291400 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic002G281800--Sobic007G046500 Sobic002G281800--Sobic007G029100 Sobic009G190800 Sobic009G190800 Sobic002G281800--Sobic009G190800 Sobic002G281800--Sobic003G310100 Sobic004G152100 Sobic004G152100 Sobic002G281800--Sobic004G152100 Sobic009G029700 Sobic009G029700 Sobic002G281800--Sobic009G029700 Sobic008G193300--Sobic008G063200 Sobic008G193300--Sobic010G080300 Sobic002G404200 Sobic002G404200 Sobic008G193300--Sobic002G404200 Sobic004G265900 Sobic004G265900 Sobic008G193300--Sobic004G265900 Sobic006G214700 Sobic006G214700 Sobic008G193300--Sobic006G214700 Sobic001G450600 Sobic001G450600 Sobic008G193300--Sobic001G450600 Sobic009G079950 Sobic009G079950 Sobic008G193300--Sobic009G079950 Sobic002G142066 Sobic002G142066 Sobic008G193300--Sobic002G142066 Sobic004G144000 Sobic004G144000 Sobic008G193300--Sobic004G144000 Sobic003G125400--Sobic008G144800 Sobic006G110900 Sobic006G110900 Sobic003G125400--Sobic006G110900 Sobic002G424100 Sobic002G424100 Sobic003G125400--Sobic002G424100 Sobic003G125400--Sobic008G063200 Sobic002G246500 Sobic002G246500 Sobic003G125400--Sobic002G246500 Sobic003G125400--Sobic003G310100 Sobic010G140600 Sobic010G140600 Sobic003G125400--Sobic010G140600 Sobic003G343400 Sobic003G343400 Sobic003G125400--Sobic003G343400 Sobic003G125400--Sobic010G080300 Sobic007G046500--Sobic010G080300 Sobic007G046500--Sobic002G281800 Sobic008G000400 Sobic008G000400 Sobic007G046500--Sobic008G000400 Sobic001G043800 Sobic001G043800 Sobic007G046500--Sobic001G043800 Sobic001G078400 Sobic001G078400 Sobic007G046500--Sobic001G078400 Sobic002G167500 Sobic002G167500 Sobic007G046500--Sobic002G167500 Sobic007G046500--Sobic008G072700 Sobic007G046500--Sobic002G404200 Sobic003G439100 Sobic003G439100 Sobic007G046500--Sobic003G439100 Sobic008G063200--Sobic001G450600 Sobic008G063200--Sobic006G110900 Sobic008G063200--Sobic006G214700 Sobic001G006000 Sobic001G006000 Sobic008G063200--Sobic001G006000 Sobic002G102200 Sobic002G102200 Sobic008G063200--Sobic002G102200 Sobic003G253300 Sobic003G253300 Sobic008G063200--Sobic003G253300 Sobic010G076800 Sobic010G076800 Sobic008G063200--Sobic010G076800 Sobic004G333400 Sobic004G333400 Sobic008G063200--Sobic004G333400 Sobic003G342200 Sobic003G342200 Sobic008G063200--Sobic003G342200 Sobic008G144800--Sobic010G140600 Sobic008G144800--Sobic003G125400 Sobic008G146900 Sobic008G146900 Sobic008G144800--Sobic008G146900 Sobic007G227700 Sobic007G227700 Sobic008G144800--Sobic007G227700 Sobic002G193100 Sobic002G193100 Sobic008G144800--Sobic002G193100 Sobic008G144800--Sobic010G080300 Sobic002G001000 Sobic002G001000 Sobic008G144800--Sobic002G001000 Sobic008G144800--Sobic003G343400 Sobic001G029200 Sobic001G029200 Sobic008G144800--Sobic001G029200 Sobic003G359900 Sobic003G359900 Sobic005G072200--Sobic003G359900 Sobic006G052200 Sobic006G052200 Sobic005G072200--Sobic006G052200 Sobic002G073900 Sobic002G073900 Sobic005G072200--Sobic002G073900 Sobic005G072200--Sobic010G080300 Sobic005G072200--Sobic009G190800 Sobic001G351100 Sobic001G351100 Sobic005G072200--Sobic001G351100 Sobic003G402200 Sobic003G402200 Sobic005G072200--Sobic003G402200 Sobic004G096100 Sobic004G096100 Sobic005G072200--Sobic004G096100 Sobic001G314900 Sobic001G314900 Sobic005G072200--Sobic001G314900 Sobic007G029100--Sobic002G404200 Sobic007G029100--Sobic009G029700 Sobic001G380500 Sobic001G380500 Sobic007G029100--Sobic001G380500 Sobic010G113000 Sobic010G113000 Sobic007G029100--Sobic010G113000 Sobic007G029100--Sobic010G080300 Sobic001G341800 Sobic001G341800 Sobic007G029100--Sobic001G341800 Sobic007G029100--Sobic002G281800 Sobic007G073700 Sobic007G073700 Sobic007G029100--Sobic007G073700 Sobic005G064800 Sobic005G064800 Sobic007G029100--Sobic005G064800 Sobic001G424300 Sobic001G424300 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic001G437200 Sobic001G437200 Sobic003G310100--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic003G310100--Sobic001G281500 Sobic006G237100 Sobic006G237100 Sobic003G310100--Sobic006G237100 Sobic003G310100--Sobic002G424100 Sobic006G111600 Sobic006G111600 Sobic003G310100--Sobic006G111600
Octagon: transcription factors


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