Gene annotation
Transcriptome id Sobic.004G152100.1
Synonym Sb04g020200
Functional annotation expressed protein
UniProt C5XSI5
Pfam PF09348
Panther DB PTHR34202 PTHR34202:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17695 : -
RAP-DB (Rice) LOC_Os03g01730.3 : expressed protein
MaizeGDB (Corn) Zm00025a020376
Brachypodium -
Barley -
Wheat TraesCS5A02G529200 , TraesCS4D02G354000 , TraesCS4B02G361000 , TraesCS4B02G361000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G391900 nifU, putative, expressed -
2 Sobic.001G447700 expressed protein -
3 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
4 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
5 Sobic.006G256600 expressed protein -
6 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
8 Sobic.002G281800 expressed protein -
9 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
10 Sobic.008G063200 expressed protein -
11 Sobic.009G068300 chloroplast lumen common family protein, putative, expressed -
12 Sobic.001G308800 expressed protein K18065: Cdc25 family phosphatase
13 Sobic.001G186200 pentatricopeptide, putative, expressed -
14 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
15 Sobic.002G033800 expressed protein -
16 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
17 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
18 Sobic.010G225600 - -
19 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
20 Sobic.007G059500 down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -


Gene co-expression network
sample Sobic004G152100 Sobic004G152100 Sobic001G391900 Sobic001G391900 Sobic004G152100--Sobic001G391900 Sobic001G447700 Sobic001G447700 Sobic004G152100--Sobic001G447700 Sobic010G218600 Sobic010G218600 Sobic004G152100--Sobic010G218600 Sobic003G085000 Sobic003G085000 Sobic004G152100--Sobic003G085000 Sobic006G256600 Sobic006G256600 Sobic004G152100--Sobic006G256600 Sobic003G170200 Sobic003G170200 Sobic004G152100--Sobic003G170200 Sobic005G127000 Sobic005G127000 Sobic004G152100--Sobic005G127000 Sobic002G281800 Sobic002G281800 Sobic004G152100--Sobic002G281800 Sobic002G102200 Sobic002G102200 Sobic004G152100--Sobic002G102200 Sobic001G391900--Sobic002G102200 Sobic006G093900 Sobic006G093900 Sobic001G391900--Sobic006G093900 Sobic002G030500 Sobic002G030500 Sobic001G391900--Sobic002G030500 Sobic002G036000 Sobic002G036000 Sobic001G391900--Sobic002G036000 Sobic006G188000 Sobic006G188000 Sobic001G391900--Sobic006G188000 Sobic009G059300 Sobic009G059300 Sobic001G391900--Sobic009G059300 Sobic001G102800 Sobic001G102800 Sobic001G391900--Sobic001G102800 Sobic004G227200 Sobic004G227200 Sobic001G391900--Sobic004G227200 Sobic003G387100 Sobic003G387100 Sobic001G391900--Sobic003G387100 Sobic001G291900 Sobic001G291900 Sobic001G447700--Sobic001G291900 Sobic001G447700--Sobic003G085000 Sobic001G447700--Sobic006G256600 Sobic001G035800 Sobic001G035800 Sobic001G447700--Sobic001G035800 Sobic001G104800 Sobic001G104800 Sobic001G447700--Sobic001G104800 Sobic002G198600 Sobic002G198600 Sobic001G447700--Sobic002G198600 Sobic001G295300 Sobic001G295300 Sobic001G447700--Sobic001G295300 Sobic001G308800 Sobic001G308800 Sobic001G447700--Sobic001G308800 Sobic006G107600 Sobic006G107600 Sobic001G447700--Sobic006G107600 Sobic001G498300 Sobic001G498300 Sobic010G218600--Sobic001G498300 Sobic005G021600 Sobic005G021600 Sobic010G218600--Sobic005G021600 Sobic010G265500 Sobic010G265500 Sobic010G218600--Sobic010G265500 Sobic007G178500 Sobic007G178500 Sobic010G218600--Sobic007G178500 Sobic008G063500 Sobic008G063500 Sobic010G218600--Sobic008G063500 Sobic001G407900 Sobic001G407900 Sobic010G218600--Sobic001G407900 Sobic010G218600--Sobic001G447700 Sobic007G023300 Sobic007G023300 Sobic010G218600--Sobic007G023300 Sobic005G192600 Sobic005G192600 Sobic010G218600--Sobic005G192600 Sobic003G085000--Sobic006G256600 Sobic003G085000--Sobic001G291900 Sobic006G055800 Sobic006G055800 Sobic003G085000--Sobic006G055800 Sobic010G255100 Sobic010G255100 Sobic003G085000--Sobic010G255100 Sobic004G336000 Sobic004G336000 Sobic003G085000--Sobic004G336000 Sobic001G531400 Sobic001G531400 Sobic003G085000--Sobic001G531400 Sobic005G002900 Sobic005G002900 Sobic003G085000--Sobic005G002900 Sobic003G085000--Sobic001G104800 Sobic004G065300 Sobic004G065300 Sobic003G085000--Sobic004G065300 Sobic006G256600--Sobic010G255100 Sobic006G256600--Sobic003G085000 Sobic006G256600--Sobic001G291900 Sobic006G210400 Sobic006G210400 Sobic006G256600--Sobic006G210400 Sobic002G297400 Sobic002G297400 Sobic006G256600--Sobic002G297400 Sobic006G256600--Sobic006G055800 Sobic006G256600--Sobic005G002900 Sobic001G309300 Sobic001G309300 Sobic006G256600--Sobic001G309300 Sobic006G256600--Sobic004G065300 Sobic001G102500 Sobic001G102500 Sobic003G170200--Sobic001G102500 Sobic007G205600 Sobic007G205600 Sobic003G170200--Sobic007G205600 Sobic008G078900 Sobic008G078900 Sobic003G170200--Sobic008G078900 Sobic003G162800 Sobic003G162800 Sobic003G170200--Sobic003G162800 Sobic003G286300 Sobic003G286300 Sobic003G170200--Sobic003G286300 Sobic001G514100 Sobic001G514100 Sobic003G170200--Sobic001G514100 Sobic001G375000 Sobic001G375000 Sobic003G170200--Sobic001G375000 Sobic001G450600 Sobic001G450600 Sobic003G170200--Sobic001G450600 Sobic003G128400 Sobic003G128400 Sobic003G170200--Sobic003G128400 Sobic007G059500 Sobic007G059500 Sobic005G127000--Sobic007G059500 Sobic008G183200 Sobic008G183200 Sobic005G127000--Sobic008G183200 Sobic010G241300 Sobic010G241300 Sobic005G127000--Sobic010G241300 Sobic004G122200 Sobic004G122200 Sobic005G127000--Sobic004G122200 Sobic001G377500 Sobic001G377500 Sobic005G127000--Sobic001G377500 Sobic001G186200 Sobic001G186200 Sobic005G127000--Sobic001G186200 Sobic010G225600 Sobic010G225600 Sobic005G127000--Sobic010G225600 Sobic005G127000--Sobic001G498300 Sobic008G151000 Sobic008G151000 Sobic005G127000--Sobic008G151000 Sobic010G080300 Sobic010G080300 Sobic002G281800--Sobic010G080300 Sobic003G291400 Sobic003G291400 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic007G046500 Sobic007G046500 Sobic002G281800--Sobic007G046500 Sobic007G029100 Sobic007G029100 Sobic002G281800--Sobic007G029100 Sobic009G190800 Sobic009G190800 Sobic002G281800--Sobic009G190800 Sobic003G310100 Sobic003G310100 Sobic002G281800--Sobic003G310100 Sobic002G281800--Sobic004G152100 Sobic009G029700 Sobic009G029700 Sobic002G281800--Sobic009G029700 Sobic006G101500 Sobic006G101500 Sobic002G102200--Sobic006G101500 Sobic002G102200--Sobic001G391900 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic008G006100 Sobic008G006100 Sobic002G102200--Sobic008G006100 Sobic008G063200 Sobic008G063200 Sobic002G102200--Sobic008G063200 Sobic002G102200--Sobic009G059300
Octagon: transcription factors


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