Gene annotation
Transcriptome id Sobic.001G308800.1
Synonym ARATH, ACR2, Sb01g030120, CDC25
Functional annotation expressed protein
UniProt C5WTH4
Pfam PF00581
Panther DB PTHR10828 PTHR10828:SF47
NCBI CDD -
KEGG Orthology K18065; Cdc25 family phosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03455 : Rhodanese/Cell cycle control phosphatase superfamily protein
RAP-DB (Rice) LOC_Os10g39860.2 : expressed protein
MaizeGDB (Corn) Zm00025a052286
Brachypodium PNT67825
Barley HORVU1Hr1G052860.10 , HORVU1Hr1G052860.11 , HORVU1Hr1G052860.12 , HORVU1Hr1G052860.13 , HORVU1Hr1G052860.14 , HORVU1Hr1G052860.15 , HORVU1Hr1G052860.17 , HORVU1Hr1G052860.2 , HORVU1Hr1G052860.3 , HORVU1Hr1G052860.1 , HORVU1Hr1G052860.6 , HORVU1Hr1G052860.7 , HORVU1Hr1G052860.5 , HORVU1Hr1G052860.8
Wheat TraesCS1D02G209300 , TraesCS1B02G219600
Populus -


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cDNA sequences
Sobic.001G308800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
3 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
4 Sobic.001G447700 expressed protein -
5 Sobic.001G104800 expressed protein -
6 Sobic.001G291900 expressed protein -
7 Sobic.002G033800 expressed protein -
8 Sobic.004G183100 pentatricopeptide repeat domain containing protein, putative, expressed -
9 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
10 Sobic.004G311100 -(PubMedID : 29017446)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
11 Sobic.001G391900 nifU, putative, expressed -
12 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
13 Sobic.002G271700 rhodanese-like domain containing protein, putative, expressed -
14 Sobic.008G063500 Photosystem I reaction center subunit N(PubMedID : 26186930)@photosystem I reaction center subunit N, chloroplast precursor, putative, expressed K02701: photosystem I subunit PsaN
15 Sobic.002G065200 pentatricopeptide, putative, expressed -
16 Sobic.003G008900 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
17 Sobic.001G023700 expressed protein -
18 Sobic.002G316700 ATP synthase subunit gamma(PubMedID : 26186930)@ATP synthase subunit gamma (Zm)(PubMedID : 27208977)@ATP synthase gamma chain, putative, expressed K02115: ATPF1G, F-type H+-transporting ATPase subunit gamma
19 Sobic.004G012900 expressed protein -
20 Sobic.007G071500 photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed K03541: photosystem II 10kDa protein


Gene co-expression network
sample Sobic001G308800 Sobic001G308800 Sobic001G029100 Sobic001G029100 Sobic001G308800--Sobic001G029100 Sobic009G143100 Sobic009G143100 Sobic001G308800--Sobic009G143100 Sobic001G295300 Sobic001G295300 Sobic001G308800--Sobic001G295300 Sobic001G447700 Sobic001G447700 Sobic001G308800--Sobic001G447700 Sobic001G104800 Sobic001G104800 Sobic001G308800--Sobic001G104800 Sobic001G291900 Sobic001G291900 Sobic001G308800--Sobic001G291900 Sobic002G033800 Sobic002G033800 Sobic001G308800--Sobic002G033800 Sobic004G183100 Sobic004G183100 Sobic001G308800--Sobic004G183100 Sobic009G030900 Sobic009G030900 Sobic001G308800--Sobic009G030900 Sobic004G175500 Sobic004G175500 Sobic001G029100--Sobic004G175500 Sobic001G029100--Sobic009G030900 Sobic001G029100--Sobic009G143100 Sobic003G387800 Sobic003G387800 Sobic001G029100--Sobic003G387800 Sobic001G029100--Sobic002G033800 Sobic007G004800 Sobic007G004800 Sobic001G029100--Sobic007G004800 Sobic002G198600 Sobic002G198600 Sobic001G029100--Sobic002G198600 Sobic006G093900 Sobic006G093900 Sobic001G029100--Sobic006G093900 Sobic007G071500 Sobic007G071500 Sobic001G029100--Sobic007G071500 Sobic009G143100--Sobic007G071500 Sobic002G316700 Sobic002G316700 Sobic009G143100--Sobic002G316700 Sobic007G223500 Sobic007G223500 Sobic009G143100--Sobic007G223500 Sobic008G134800 Sobic008G134800 Sobic009G143100--Sobic008G134800 Sobic009G143100--Sobic003G387800 Sobic009G140600 Sobic009G140600 Sobic009G143100--Sobic009G140600 Sobic001G417200 Sobic001G417200 Sobic009G143100--Sobic001G417200 Sobic006G105900 Sobic006G105900 Sobic009G143100--Sobic006G105900 Sobic004G249800 Sobic004G249800 Sobic009G143100--Sobic004G249800 Sobic001G295300--Sobic001G291900 Sobic003G008900 Sobic003G008900 Sobic001G295300--Sobic003G008900 Sobic001G295300--Sobic001G308800 Sobic001G295300--Sobic001G447700 Sobic001G006400 Sobic001G006400 Sobic001G295300--Sobic001G006400 Sobic007G208300 Sobic007G208300 Sobic001G295300--Sobic007G208300 Sobic003G022300 Sobic003G022300 Sobic001G295300--Sobic003G022300 Sobic004G227200 Sobic004G227200 Sobic001G295300--Sobic004G227200 Sobic001G295300--Sobic001G104800 Sobic001G447700--Sobic001G291900 Sobic003G085000 Sobic003G085000 Sobic001G447700--Sobic003G085000 Sobic006G256600 Sobic006G256600 Sobic001G447700--Sobic006G256600 Sobic001G035800 Sobic001G035800 Sobic001G447700--Sobic001G035800 Sobic001G447700--Sobic001G104800 Sobic001G447700--Sobic002G198600 Sobic001G447700--Sobic001G295300 Sobic001G447700--Sobic001G308800 Sobic006G107600 Sobic006G107600 Sobic001G447700--Sobic006G107600 Sobic001G104800--Sobic001G291900 Sobic001G104800--Sobic009G030900 Sobic001G368500 Sobic001G368500 Sobic001G104800--Sobic001G368500 Sobic001G469933 Sobic001G469933 Sobic001G104800--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic001G104800--Sobic001G122400 Sobic003G324700 Sobic003G324700 Sobic001G104800--Sobic003G324700 Sobic004G335800 Sobic004G335800 Sobic001G104800--Sobic004G335800 Sobic007G090400 Sobic007G090400 Sobic001G104800--Sobic007G090400 Sobic002G152800 Sobic002G152800 Sobic001G104800--Sobic002G152800 Sobic001G291900--Sobic001G368500 Sobic001G291900--Sobic001G104800 Sobic001G291900--Sobic003G085000 Sobic004G336000 Sobic004G336000 Sobic001G291900--Sobic004G336000 Sobic005G002900 Sobic005G002900 Sobic001G291900--Sobic005G002900 Sobic009G059300 Sobic009G059300 Sobic001G291900--Sobic009G059300 Sobic001G309300 Sobic001G309300 Sobic001G291900--Sobic001G309300 Sobic006G055800 Sobic006G055800 Sobic001G291900--Sobic006G055800 Sobic006G106400 Sobic006G106400 Sobic001G291900--Sobic006G106400 Sobic004G343300 Sobic004G343300 Sobic002G033800--Sobic004G343300 Sobic003G132100 Sobic003G132100 Sobic002G033800--Sobic003G132100 Sobic004G023200 Sobic004G023200 Sobic002G033800--Sobic004G023200 Sobic002G033800--Sobic007G071500 Sobic002G152700 Sobic002G152700 Sobic002G033800--Sobic002G152700 Sobic006G103400 Sobic006G103400 Sobic002G033800--Sobic006G103400 Sobic002G033800--Sobic004G175500 Sobic001G448400 Sobic001G448400 Sobic002G033800--Sobic001G448400 Sobic002G033800--Sobic001G029100 Sobic008G119250 Sobic008G119250 Sobic004G183100--Sobic008G119250 Sobic004G311100 Sobic004G311100 Sobic004G183100--Sobic004G311100 Sobic004G183100--Sobic002G198600 Sobic004G183100--Sobic009G030900 Sobic004G183100--Sobic001G029100 Sobic003G222500 Sobic003G222500 Sobic004G183100--Sobic003G222500 Sobic004G183100--Sobic001G308800 Sobic004G183100--Sobic001G104800 Sobic009G183700 Sobic009G183700 Sobic004G183100--Sobic009G183700 Sobic010G005500 Sobic010G005500 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic007G052400 Sobic007G052400 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic003G002300 Sobic003G002300 Sobic009G030900--Sobic003G002300 Sobic008G171300 Sobic008G171300 Sobic009G030900--Sobic008G171300 Sobic009G030900--Sobic004G175500
Octagon: transcription factors


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