Gene annotation
Transcriptome id Sobic.002G128900.1
Synonym Sb02g011120
Functional annotation thioesterase family protein, putative, expressed
UniProt C5X5R9
Pfam PF03061
Panther DB PTHR21660 PTHR21660:SF12
NCBI CDD KOG3328; HGG motif-containing thioesterase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61200 : Thioesterase superfamily protein
RAP-DB (Rice) LOC_Os07g27870.1 : thioesterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a045875
Brachypodium PNT75183 , PNT75182 , KQK16374 , KQK16375 , KQK16371 , KQK16372 , KQK16373
Barley HORVU2Hr1G094890.2 , HORVU2Hr1G094890.1
Wheat TraesCS2A02G400000 , TraesCS2B02G418100 , TraesCS2D02G397600
Populus -


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cDNA sequences
Sobic.002G128900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G140600 bolA, putative, expressed -
2 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
3 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
4 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
5 Sobic.004G281900 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed K01770: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
6 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
7 Sobic.008G096800 nnrU, putative, expressed K15744: zeta-carotene isomerase
8 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
9 Sobic.008G144800 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
10 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
11 Sobic.010G156000 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.009G207300 ubiquitin domain-containing protein 1, putative, expressed -
13 Sobic.002G321901 - -
14 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
15 Sobic.001G291900 expressed protein -
16 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
17 Sobic.006G067500 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.006G261700 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
19 Sobic.004G324100 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
20 Sobic.002G339600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha


Gene co-expression network
sample Sobic002G128900 Sobic002G128900 Sobic010G140600 Sobic010G140600 Sobic002G128900--Sobic010G140600 Sobic002G279700 Sobic002G279700 Sobic002G128900--Sobic002G279700 Sobic001G295300 Sobic001G295300 Sobic002G128900--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G128900--Sobic002G200900 Sobic004G281900 Sobic004G281900 Sobic002G128900--Sobic004G281900 Sobic002G072400 Sobic002G072400 Sobic002G128900--Sobic002G072400 Sobic008G096800 Sobic008G096800 Sobic002G128900--Sobic008G096800 Sobic010G269400 Sobic010G269400 Sobic002G128900--Sobic010G269400 Sobic008G144800 Sobic008G144800 Sobic002G128900--Sobic008G144800 Sobic010G140600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic010G140600--Sobic010G058200 Sobic001G286600 Sobic001G286600 Sobic010G140600--Sobic001G286600 Sobic010G140600--Sobic004G281900 Sobic004G238200 Sobic004G238200 Sobic010G140600--Sobic004G238200 Sobic002G102200 Sobic002G102200 Sobic010G140600--Sobic002G102200 Sobic001G072700 Sobic001G072700 Sobic010G140600--Sobic001G072700 Sobic006G155500 Sobic006G155500 Sobic010G140600--Sobic006G155500 Sobic010G140600--Sobic008G144800 Sobic002G279700--Sobic002G128900 Sobic006G261700 Sobic006G261700 Sobic002G279700--Sobic006G261700 Sobic002G279700--Sobic001G295300 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic008G188600 Sobic008G188600 Sobic002G279700--Sobic008G188600 Sobic001G020100 Sobic001G020100 Sobic002G279700--Sobic001G020100 Sobic008G006200 Sobic008G006200 Sobic002G279700--Sobic008G006200 Sobic004G307400 Sobic004G307400 Sobic002G279700--Sobic004G307400 Sobic001G291900 Sobic001G291900 Sobic001G295300--Sobic001G291900 Sobic003G008900 Sobic003G008900 Sobic001G295300--Sobic003G008900 Sobic001G308800 Sobic001G308800 Sobic001G295300--Sobic001G308800 Sobic001G447700 Sobic001G447700 Sobic001G295300--Sobic001G447700 Sobic001G006400 Sobic001G006400 Sobic001G295300--Sobic001G006400 Sobic007G208300 Sobic007G208300 Sobic001G295300--Sobic007G208300 Sobic003G022300 Sobic003G022300 Sobic001G295300--Sobic003G022300 Sobic004G227200 Sobic004G227200 Sobic001G295300--Sobic004G227200 Sobic001G104800 Sobic001G104800 Sobic001G295300--Sobic001G104800 Sobic006G108200 Sobic006G108200 Sobic002G200900--Sobic006G108200 Sobic002G200900--Sobic004G281900 Sobic002G351600 Sobic002G351600 Sobic002G200900--Sobic002G351600 Sobic001G220000 Sobic001G220000 Sobic002G200900--Sobic001G220000 Sobic004G055000 Sobic004G055000 Sobic002G200900--Sobic004G055000 Sobic003G275200 Sobic003G275200 Sobic002G200900--Sobic003G275200 Sobic002G200900--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic002G200900--Sobic006G050400 Sobic002G159100 Sobic002G159100 Sobic002G200900--Sobic002G159100 Sobic007G087100 Sobic007G087100 Sobic004G281900--Sobic007G087100 Sobic003G328100 Sobic003G328100 Sobic004G281900--Sobic003G328100 Sobic003G070900 Sobic003G070900 Sobic004G281900--Sobic003G070900 Sobic006G102000 Sobic006G102000 Sobic004G281900--Sobic006G102000 Sobic006G197300 Sobic006G197300 Sobic004G281900--Sobic006G197300 Sobic001G005200 Sobic001G005200 Sobic004G281900--Sobic001G005200 Sobic006G232600 Sobic006G232600 Sobic004G281900--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic004G281900--Sobic001G436400 Sobic004G281900--Sobic002G072400 Sobic004G207400 Sobic004G207400 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic003G372900 Sobic003G372900 Sobic008G096800--Sobic003G372900 Sobic005G002900 Sobic005G002900 Sobic008G096800--Sobic005G002900 Sobic002G321901 Sobic002G321901 Sobic008G096800--Sobic002G321901 Sobic001G500600 Sobic001G500600 Sobic008G096800--Sobic001G500600 Sobic003G287900 Sobic003G287900 Sobic008G096800--Sobic003G287900 Sobic001G083100 Sobic001G083100 Sobic008G096800--Sobic001G083100 Sobic003G141100 Sobic003G141100 Sobic008G096800--Sobic003G141100 Sobic009G168600 Sobic009G168600 Sobic008G096800--Sobic009G168600 Sobic003G232700 Sobic003G232700 Sobic008G096800--Sobic003G232700 Sobic010G269400--Sobic001G286600 Sobic006G258700 Sobic006G258700 Sobic010G269400--Sobic006G258700 Sobic010G269400--Sobic010G140600 Sobic010G269400--Sobic010G058200 Sobic003G037300 Sobic003G037300 Sobic010G269400--Sobic003G037300 Sobic003G014300 Sobic003G014300 Sobic010G269400--Sobic003G014300 Sobic010G269400--Sobic002G102200 Sobic006G110900 Sobic006G110900 Sobic010G269400--Sobic006G110900 Sobic009G062400 Sobic009G062400 Sobic010G269400--Sobic009G062400 Sobic008G144800--Sobic010G140600 Sobic003G125400 Sobic003G125400 Sobic008G144800--Sobic003G125400 Sobic008G146900 Sobic008G146900 Sobic008G144800--Sobic008G146900 Sobic007G227700 Sobic007G227700 Sobic008G144800--Sobic007G227700 Sobic002G193100 Sobic002G193100 Sobic008G144800--Sobic002G193100 Sobic010G080300 Sobic010G080300 Sobic008G144800--Sobic010G080300 Sobic002G001000 Sobic002G001000 Sobic008G144800--Sobic002G001000 Sobic003G343400 Sobic003G343400 Sobic008G144800--Sobic003G343400 Sobic001G029200 Sobic001G029200 Sobic008G144800--Sobic001G029200
Octagon: transcription factors


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