Gene annotation
Transcriptome id Sobic.002G321901.1
Synonym -
Functional annotation -
UniProt A0A1W0W6I2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G096800 nnrU, putative, expressed K15744: zeta-carotene isomerase
2 Sobic.003G264800 expressed protein -
3 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
4 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
5 Sobic.010G140600 bolA, putative, expressed -
6 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
7 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
8 Sobic.004G281900 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed K01770: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
9 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
10 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
11 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
12 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
13 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
14 Sobic.009G103000 ubiquitin family protein, putative, expressed -
15 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
16 Sobic.004G019800 MATE domain containing protein, expressed -
17 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
18 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
19 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
20 Sobic.007G162600 uncharacterized protein all1601, putative, expressed K18010: 7-hydroxymethyl chlorophyll a reductase


Gene co-expression network
sample Sobic002G321901 Sobic002G321901 Sobic008G096800 Sobic008G096800 Sobic002G321901--Sobic008G096800 Sobic003G264800 Sobic003G264800 Sobic002G321901--Sobic003G264800 Sobic004G238200 Sobic004G238200 Sobic002G321901--Sobic004G238200 Sobic006G232600 Sobic006G232600 Sobic002G321901--Sobic006G232600 Sobic010G140600 Sobic010G140600 Sobic002G321901--Sobic010G140600 Sobic001G500600 Sobic001G500600 Sobic002G321901--Sobic001G500600 Sobic002G072400 Sobic002G072400 Sobic002G321901--Sobic002G072400 Sobic004G281900 Sobic004G281900 Sobic002G321901--Sobic004G281900 Sobic006G233700 Sobic006G233700 Sobic002G321901--Sobic006G233700 Sobic003G372900 Sobic003G372900 Sobic008G096800--Sobic003G372900 Sobic005G002900 Sobic005G002900 Sobic008G096800--Sobic005G002900 Sobic008G096800--Sobic002G321901 Sobic008G096800--Sobic001G500600 Sobic003G287900 Sobic003G287900 Sobic008G096800--Sobic003G287900 Sobic001G083100 Sobic001G083100 Sobic008G096800--Sobic001G083100 Sobic003G141100 Sobic003G141100 Sobic008G096800--Sobic003G141100 Sobic009G168600 Sobic009G168600 Sobic008G096800--Sobic009G168600 Sobic003G232700 Sobic003G232700 Sobic008G096800--Sobic003G232700 Sobic003G186900 Sobic003G186900 Sobic003G264800--Sobic003G186900 Sobic003G003450 Sobic003G003450 Sobic003G264800--Sobic003G003450 Sobic003G264800--Sobic006G232600 Sobic005G106600 Sobic005G106600 Sobic003G264800--Sobic005G106600 Sobic003G264800--Sobic002G072400 Sobic009G103000 Sobic009G103000 Sobic003G264800--Sobic009G103000 Sobic003G264800--Sobic004G238200 Sobic004G207400 Sobic004G207400 Sobic003G264800--Sobic004G207400 Sobic004G337400 Sobic004G337400 Sobic003G264800--Sobic004G337400 Sobic004G238200--Sobic003G232700 Sobic004G238200--Sobic004G207400 Sobic004G238200--Sobic001G500600 Sobic005G084500 Sobic005G084500 Sobic004G238200--Sobic005G084500 Sobic001G516901 Sobic001G516901 Sobic004G238200--Sobic001G516901 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic006G197300 Sobic006G197300 Sobic004G238200--Sobic006G197300 Sobic004G238200--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic006G232600--Sobic009G170200 Sobic007G087100 Sobic007G087100 Sobic006G232600--Sobic007G087100 Sobic006G232600--Sobic003G003450 Sobic001G378100 Sobic001G378100 Sobic006G232600--Sobic001G378100 Sobic009G073900 Sobic009G073900 Sobic006G232600--Sobic009G073900 Sobic006G232600--Sobic006G233700 Sobic006G232600--Sobic009G103000 Sobic001G077300 Sobic001G077300 Sobic006G232600--Sobic001G077300 Sobic002G081400 Sobic002G081400 Sobic006G232600--Sobic002G081400 Sobic010G269400 Sobic010G269400 Sobic010G140600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic010G140600--Sobic010G058200 Sobic001G286600 Sobic001G286600 Sobic010G140600--Sobic001G286600 Sobic010G140600--Sobic004G281900 Sobic010G140600--Sobic004G238200 Sobic002G102200 Sobic002G102200 Sobic010G140600--Sobic002G102200 Sobic001G072700 Sobic001G072700 Sobic010G140600--Sobic001G072700 Sobic006G155500 Sobic006G155500 Sobic010G140600--Sobic006G155500 Sobic008G144800 Sobic008G144800 Sobic010G140600--Sobic008G144800 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic001G500600--Sobic003G141100 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic001G500600--Sobic003G372900 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G072400--Sobic002G081400 Sobic004G281900--Sobic007G087100 Sobic003G328100 Sobic003G328100 Sobic004G281900--Sobic003G328100 Sobic004G281900--Sobic003G070900 Sobic006G102000 Sobic006G102000 Sobic004G281900--Sobic006G102000 Sobic004G281900--Sobic006G197300 Sobic001G005200 Sobic001G005200 Sobic004G281900--Sobic001G005200 Sobic004G281900--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic004G281900--Sobic001G436400 Sobic004G281900--Sobic002G072400 Sobic006G233700--Sobic006G232600 Sobic006G233700--Sobic001G500600 Sobic010G110400 Sobic010G110400 Sobic006G233700--Sobic010G110400 Sobic006G233700--Sobic009G170200 Sobic001G060500 Sobic001G060500 Sobic006G233700--Sobic001G060500 Sobic003G203300 Sobic003G203300 Sobic006G233700--Sobic003G203300 Sobic010G171600 Sobic010G171600 Sobic006G233700--Sobic010G171600 Sobic006G233700--Sobic003G070900 Sobic001G219700 Sobic001G219700 Sobic006G233700--Sobic001G219700
Octagon: transcription factors


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