Gene annotation
Transcriptome id Sobic.007G023200.1
Synonym Sb07g002050
Functional annotation OsFBX178 - F-box domain containing protein, expressed
UniProt A0A1B6PF43
Pfam -
Panther DB PTHR32212 PTHR32212:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56810 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os05g49680.1 : OsFBX178 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2B02G570700 , TraesCS2D02G592200 , TraesCS6A02G046200
Populus -


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cDNA sequences
Sobic.007G023200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
2 Sobic.003G217700 - -
3 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
4 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
5 Sobic.002G168300 RGH2B, putative, expressed -
6 Sobic.005G059800 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
7 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
8 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
9 Sobic.010G176550 - -
10 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase
11 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
12 Sobic.010G032900 transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
13 Sobic.001G516901 - -
14 Sobic.003G352500 ribonuclease protein, putative, expressed -
15 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
16 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
17 Sobic.002G000600 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
18 Sobic.003G222900 OsFtsH9 FtsH protease, homologue of AtFtsH11, expressed K08955: ATP-dependent metalloprotease
19 Sobic.004G238900 methyltransferase domain containing protein, putative, expressed -
20 Sobic.006G145200 expressed protein -


Gene co-expression network
sample Sobic007G023200 Sobic007G023200 Sobic004G238200 Sobic004G238200 Sobic007G023200--Sobic004G238200 Sobic003G217700 Sobic003G217700 Sobic007G023200--Sobic003G217700 Sobic004G163800 Sobic004G163800 Sobic007G023200--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic007G023200--Sobic003G234900 Sobic002G168300 Sobic002G168300 Sobic007G023200--Sobic002G168300 Sobic005G059800 Sobic005G059800 Sobic007G023200--Sobic005G059800 Sobic007G185700 Sobic007G185700 Sobic007G023200--Sobic007G185700 Sobic008G062400 Sobic008G062400 Sobic007G023200--Sobic008G062400 Sobic010G176550 Sobic010G176550 Sobic007G023200--Sobic010G176550 Sobic003G232700 Sobic003G232700 Sobic004G238200--Sobic003G232700 Sobic004G207400 Sobic004G207400 Sobic004G238200--Sobic004G207400 Sobic001G500600 Sobic001G500600 Sobic004G238200--Sobic001G500600 Sobic005G084500 Sobic005G084500 Sobic004G238200--Sobic005G084500 Sobic001G516901 Sobic001G516901 Sobic004G238200--Sobic001G516901 Sobic002G072400 Sobic002G072400 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic006G197300 Sobic006G197300 Sobic004G238200--Sobic006G197300 Sobic006G232600 Sobic006G232600 Sobic004G238200--Sobic006G232600 Sobic003G217700--Sobic007G185700 Sobic003G217700--Sobic010G176550 Sobic003G217700--Sobic007G023200 Sobic001G530900 Sobic001G530900 Sobic003G217700--Sobic001G530900 Sobic003G217700--Sobic005G084500 Sobic004G042200 Sobic004G042200 Sobic003G217700--Sobic004G042200 Sobic008G001900 Sobic008G001900 Sobic003G217700--Sobic008G001900 Sobic001G198100 Sobic001G198100 Sobic003G217700--Sobic001G198100 Sobic003G217700--Sobic004G238200 Sobic004G120100 Sobic004G120100 Sobic004G163800--Sobic004G120100 Sobic002G043600 Sobic002G043600 Sobic004G163800--Sobic002G043600 Sobic004G163800--Sobic003G234900 Sobic004G163800--Sobic003G232700 Sobic004G163800--Sobic005G084500 Sobic002G431300 Sobic002G431300 Sobic004G163800--Sobic002G431300 Sobic004G163800--Sobic004G238200 Sobic001G327800 Sobic001G327800 Sobic004G163800--Sobic001G327800 Sobic002G343400 Sobic002G343400 Sobic004G163800--Sobic002G343400 Sobic003G234900--Sobic004G163800 Sobic003G234900--Sobic007G185700 Sobic003G067100 Sobic003G067100 Sobic003G234900--Sobic003G067100 Sobic005G231100 Sobic005G231100 Sobic003G234900--Sobic005G231100 Sobic003G234900--Sobic002G431300 Sobic003G234900--Sobic002G043600 Sobic003G141100 Sobic003G141100 Sobic003G234900--Sobic003G141100 Sobic003G234900--Sobic002G343400 Sobic006G038500 Sobic006G038500 Sobic003G234900--Sobic006G038500 Sobic004G248400 Sobic004G248400 Sobic002G168300--Sobic004G248400 Sobic008G172300 Sobic008G172300 Sobic002G168300--Sobic008G172300 Sobic003G381200 Sobic003G381200 Sobic002G168300--Sobic003G381200 Sobic004G026500 Sobic004G026500 Sobic002G168300--Sobic004G026500 Sobic001G102500 Sobic001G102500 Sobic002G168300--Sobic001G102500 Sobic002G168300--Sobic007G023200 Sobic009G014100 Sobic009G014100 Sobic002G168300--Sobic009G014100 Sobic004G333400 Sobic004G333400 Sobic002G168300--Sobic004G333400 Sobic001G219700 Sobic001G219700 Sobic002G168300--Sobic001G219700 Sobic010G032900 Sobic010G032900 Sobic005G059800--Sobic010G032900 Sobic002G294800 Sobic002G294800 Sobic005G059800--Sobic002G294800 Sobic006G185100 Sobic006G185100 Sobic005G059800--Sobic006G185100 Sobic001G194200 Sobic001G194200 Sobic005G059800--Sobic001G194200 Sobic003G155100 Sobic003G155100 Sobic005G059800--Sobic003G155100 Sobic003G011300 Sobic003G011300 Sobic005G059800--Sobic003G011300 Sobic008G044100 Sobic008G044100 Sobic005G059800--Sobic008G044100 Sobic008G070800 Sobic008G070800 Sobic005G059800--Sobic008G070800 Sobic003G398700 Sobic003G398700 Sobic005G059800--Sobic003G398700 Sobic001G054100 Sobic001G054100 Sobic007G185700--Sobic001G054100 Sobic007G185700--Sobic003G234900 Sobic007G185700--Sobic003G141100 Sobic007G185700--Sobic001G500600 Sobic007G185700--Sobic003G217700 Sobic007G185700--Sobic001G530900 Sobic003G352500 Sobic003G352500 Sobic007G185700--Sobic003G352500 Sobic001G261573 Sobic001G261573 Sobic007G185700--Sobic001G261573 Sobic007G185700--Sobic005G231100 Sobic008G062400--Sobic003G141100 Sobic008G062400--Sobic003G232700 Sobic008G062400--Sobic007G023200 Sobic008G062400--Sobic004G120100 Sobic002G000600 Sobic002G000600 Sobic008G062400--Sobic002G000600 Sobic003G247400 Sobic003G247400 Sobic008G062400--Sobic003G247400 Sobic008G062400--Sobic003G234900 Sobic002G347600 Sobic002G347600 Sobic008G062400--Sobic002G347600 Sobic008G062400--Sobic004G163800 Sobic002G031400 Sobic002G031400 Sobic010G176550--Sobic002G031400 Sobic004G034800 Sobic004G034800 Sobic010G176550--Sobic004G034800 Sobic010G176550--Sobic001G261573 Sobic010G176550--Sobic003G217700 Sobic010G176550--Sobic007G185700 Sobic001G035900 Sobic001G035900 Sobic010G176550--Sobic001G035900 Sobic010G176550--Sobic003G234900 Sobic010G005600 Sobic010G005600 Sobic010G176550--Sobic010G005600 Sobic010G176550--Sobic010G032900
Octagon: transcription factors


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