Gene annotation
Transcriptome id Sobic.004G238900.1
Synonym Sb04g028100
Functional annotation methyltransferase domain containing protein, putative, expressed
UniProt A0A194YRE8
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF827
NCBI CDD KOG4300; Predicted methyltransferase
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G69523 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g51030.1 : methyltransferase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033211
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G238900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
2 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
3 Sobic.004G359100 expressed protein -
4 Sobic.001G102500 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed K03527: ispH, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
5 Sobic.002G343400 tic20, putative, expressed -
6 Sobic.003G369400 expressed protein -
7 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
8 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
9 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
10 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
11 Sobic.003G083400 cytoskeletal protein, putative, expressed -
12 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
13 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
14 Sobic.006G088000 translocon Tic40, putative, expressed -
15 Sobic.005G084800 expressed protein -
16 Sobic.003G217700 - -
17 Sobic.010G168301 - -
18 Sobic.007G224100 heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
19 Sobic.003G352500 ribonuclease protein, putative, expressed -
20 Sobic.009G068300 chloroplast lumen common family protein, putative, expressed -


Gene co-expression network
sample Sobic004G238900 Sobic004G238900 Sobic003G067100 Sobic003G067100 Sobic004G238900--Sobic003G067100 Sobic005G014700 Sobic005G014700 Sobic004G238900--Sobic005G014700 Sobic004G359100 Sobic004G359100 Sobic004G238900--Sobic004G359100 Sobic001G102500 Sobic001G102500 Sobic004G238900--Sobic001G102500 Sobic002G343400 Sobic002G343400 Sobic004G238900--Sobic002G343400 Sobic003G369400 Sobic003G369400 Sobic004G238900--Sobic003G369400 Sobic007G023200 Sobic007G023200 Sobic004G238900--Sobic007G023200 Sobic010G255100 Sobic010G255100 Sobic004G238900--Sobic010G255100 Sobic004G163800 Sobic004G163800 Sobic004G238900--Sobic004G163800 Sobic003G067100--Sobic005G014700 Sobic003G234900 Sobic003G234900 Sobic003G067100--Sobic003G234900 Sobic003G067100--Sobic001G102500 Sobic003G067100--Sobic004G238900 Sobic006G058100 Sobic006G058100 Sobic003G067100--Sobic006G058100 Sobic003G434700 Sobic003G434700 Sobic003G067100--Sobic003G434700 Sobic002G043600 Sobic002G043600 Sobic003G067100--Sobic002G043600 Sobic009G129100 Sobic009G129100 Sobic003G067100--Sobic009G129100 Sobic003G067100--Sobic004G163800 Sobic005G014700--Sobic003G067100 Sobic005G014700--Sobic001G102500 Sobic005G014700--Sobic002G043600 Sobic001G327800 Sobic001G327800 Sobic005G014700--Sobic001G327800 Sobic005G014700--Sobic010G255100 Sobic005G014700--Sobic004G238900 Sobic005G014700--Sobic004G163800 Sobic002G156100 Sobic002G156100 Sobic005G014700--Sobic002G156100 Sobic001G032700 Sobic001G032700 Sobic005G014700--Sobic001G032700 Sobic004G359100--Sobic002G343400 Sobic002G431300 Sobic002G431300 Sobic004G359100--Sobic002G431300 Sobic005G082200 Sobic005G082200 Sobic004G359100--Sobic005G082200 Sobic004G359100--Sobic004G238900 Sobic004G359100--Sobic003G067100 Sobic004G359100--Sobic010G255100 Sobic003G083400 Sobic003G083400 Sobic004G359100--Sobic003G083400 Sobic001G375000 Sobic001G375000 Sobic004G359100--Sobic001G375000 Sobic006G088000 Sobic006G088000 Sobic004G359100--Sobic006G088000 Sobic001G102500--Sobic003G067100 Sobic001G102500--Sobic005G014700 Sobic001G102500--Sobic010G255100 Sobic006G186600 Sobic006G186600 Sobic001G102500--Sobic006G186600 Sobic003G170200 Sobic003G170200 Sobic001G102500--Sobic003G170200 Sobic002G168300 Sobic002G168300 Sobic001G102500--Sobic002G168300 Sobic001G102500--Sobic003G434700 Sobic006G210400 Sobic006G210400 Sobic001G102500--Sobic006G210400 Sobic001G102500--Sobic004G238900 Sobic002G343400--Sobic004G359100 Sobic002G343400--Sobic004G163800 Sobic002G343400--Sobic003G234900 Sobic001G382800 Sobic001G382800 Sobic002G343400--Sobic001G382800 Sobic001G401700 Sobic001G401700 Sobic002G343400--Sobic001G401700 Sobic002G343400--Sobic001G327800 Sobic002G343400--Sobic002G431300 Sobic002G343400--Sobic004G238900 Sobic002G343400--Sobic003G067100 Sobic001G194200 Sobic001G194200 Sobic003G369400--Sobic001G194200 Sobic004G263600 Sobic004G263600 Sobic003G369400--Sobic004G263600 Sobic004G291900 Sobic004G291900 Sobic003G369400--Sobic004G291900 Sobic007G103100 Sobic007G103100 Sobic003G369400--Sobic007G103100 Sobic003G369400--Sobic003G067100 Sobic001G289800 Sobic001G289800 Sobic003G369400--Sobic001G289800 Sobic003G355900 Sobic003G355900 Sobic003G369400--Sobic003G355900 Sobic003G369400--Sobic004G238900 Sobic001G002000 Sobic001G002000 Sobic003G369400--Sobic001G002000 Sobic004G238200 Sobic004G238200 Sobic007G023200--Sobic004G238200 Sobic003G217700 Sobic003G217700 Sobic007G023200--Sobic003G217700 Sobic007G023200--Sobic004G163800 Sobic007G023200--Sobic003G234900 Sobic007G023200--Sobic002G168300 Sobic005G059800 Sobic005G059800 Sobic007G023200--Sobic005G059800 Sobic007G185700 Sobic007G185700 Sobic007G023200--Sobic007G185700 Sobic008G062400 Sobic008G062400 Sobic007G023200--Sobic008G062400 Sobic010G176550 Sobic010G176550 Sobic007G023200--Sobic010G176550 Sobic006G256600 Sobic006G256600 Sobic010G255100--Sobic006G256600 Sobic003G085000 Sobic003G085000 Sobic010G255100--Sobic003G085000 Sobic010G255100--Sobic001G382800 Sobic006G055800 Sobic006G055800 Sobic010G255100--Sobic006G055800 Sobic010G255100--Sobic005G014700 Sobic003G128400 Sobic003G128400 Sobic010G255100--Sobic003G128400 Sobic010G255100--Sobic006G210400 Sobic001G308200 Sobic001G308200 Sobic010G255100--Sobic001G308200 Sobic010G255100--Sobic001G102500 Sobic004G120100 Sobic004G120100 Sobic004G163800--Sobic004G120100 Sobic004G163800--Sobic002G043600 Sobic004G163800--Sobic003G234900 Sobic003G232700 Sobic003G232700 Sobic004G163800--Sobic003G232700 Sobic005G084500 Sobic005G084500 Sobic004G163800--Sobic005G084500 Sobic004G163800--Sobic002G431300 Sobic004G163800--Sobic004G238200 Sobic004G163800--Sobic001G327800 Sobic004G163800--Sobic002G343400
Octagon: transcription factors


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