Gene annotation
Transcriptome id Sobic.004G163800.1
Synonym Sb04g021550, At-A/N-InvE, INV-E
Functional annotation neutral/alkaline invertase, putative, expressed
UniProt C5XTD6
Pfam PF12899
Panther DB PTHR31916 PTHR31916:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22510 : alkaline/neutral invertase
RAP-DB (Rice) LOC_Os02g32730.1 : neutral/alkaline invertase, putative, expressed
MaizeGDB (Corn) Zm00025a031466
Brachypodium KQJ82487 , KQJ99705 , KQJ99704
Barley HORVU2Hr1G072590.5 , HORVU2Hr1G072590.4 , HORVU2Hr1G072590.3 , HORVU2Hr1G072590.2 , HORVU2Hr1G072590.1
Wheat TraesCS2B02G309800 , TraesCS2A02G292900 , TraesCS2A02G292900 , TraesCS2D02G291100 , TraesCS2D02G291100
Populus -


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cDNA sequences
Sobic.004G163800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase
2 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
3 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
4 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
5 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
6 Sobic.002G431300 uncharacterized ACR, YagE family COG1723 containing protein, expressed -
7 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
8 Sobic.001G327800 uncharacterized mscS family protein, putative, expressed K16052: ynaI, MscS family membrane protein
9 Sobic.002G343400 tic20, putative, expressed -
10 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
11 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
12 Sobic.001G516901 - -
13 Sobic.007G005400 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
14 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
15 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
16 Sobic.003G352500 ribonuclease protein, putative, expressed -
17 Sobic.005G084800 expressed protein -
18 Sobic.010G136200 oxidoreductase/ transition metal ion binding protein, putative, expressed -
19 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
20 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic004G163800 Sobic004G163800 Sobic004G120100 Sobic004G120100 Sobic004G163800--Sobic004G120100 Sobic002G043600 Sobic002G043600 Sobic004G163800--Sobic002G043600 Sobic003G234900 Sobic003G234900 Sobic004G163800--Sobic003G234900 Sobic003G232700 Sobic003G232700 Sobic004G163800--Sobic003G232700 Sobic005G084500 Sobic005G084500 Sobic004G163800--Sobic005G084500 Sobic002G431300 Sobic002G431300 Sobic004G163800--Sobic002G431300 Sobic004G238200 Sobic004G238200 Sobic004G163800--Sobic004G238200 Sobic001G327800 Sobic001G327800 Sobic004G163800--Sobic001G327800 Sobic002G343400 Sobic002G343400 Sobic004G163800--Sobic002G343400 Sobic004G120100--Sobic004G163800 Sobic007G136200 Sobic007G136200 Sobic004G120100--Sobic007G136200 Sobic006G038500 Sobic006G038500 Sobic004G120100--Sobic006G038500 Sobic004G120100--Sobic003G232700 Sobic001G516901 Sobic001G516901 Sobic004G120100--Sobic001G516901 Sobic004G120100--Sobic005G084500 Sobic004G120100--Sobic003G234900 Sobic004G120100--Sobic004G238200 Sobic004G120100--Sobic002G043600 Sobic002G043600--Sobic003G232700 Sobic002G181000 Sobic002G181000 Sobic002G043600--Sobic002G181000 Sobic002G043600--Sobic001G516901 Sobic003G352500 Sobic003G352500 Sobic002G043600--Sobic003G352500 Sobic002G043600--Sobic004G163800 Sobic001G495200 Sobic001G495200 Sobic002G043600--Sobic001G495200 Sobic004G011300 Sobic004G011300 Sobic002G043600--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic002G043600--Sobic005G002900 Sobic005G231100 Sobic005G231100 Sobic002G043600--Sobic005G231100 Sobic003G234900--Sobic004G163800 Sobic007G185700 Sobic007G185700 Sobic003G234900--Sobic007G185700 Sobic003G067100 Sobic003G067100 Sobic003G234900--Sobic003G067100 Sobic003G234900--Sobic005G231100 Sobic003G234900--Sobic002G431300 Sobic003G234900--Sobic002G043600 Sobic003G141100 Sobic003G141100 Sobic003G234900--Sobic003G141100 Sobic003G234900--Sobic002G343400 Sobic003G234900--Sobic006G038500 Sobic001G500600 Sobic001G500600 Sobic003G232700--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic003G232700--Sobic006G197300 Sobic003G232700--Sobic002G181000 Sobic003G232700--Sobic002G043600 Sobic003G232700--Sobic001G495200 Sobic003G232700--Sobic003G141100 Sobic003G232700--Sobic003G352500 Sobic003G232700--Sobic004G238200 Sobic003G301300 Sobic003G301300 Sobic003G232700--Sobic003G301300 Sobic007G005400 Sobic007G005400 Sobic005G084500--Sobic007G005400 Sobic002G118200 Sobic002G118200 Sobic005G084500--Sobic002G118200 Sobic005G084500--Sobic004G238200 Sobic004G337400 Sobic004G337400 Sobic005G084500--Sobic004G337400 Sobic006G219600 Sobic006G219600 Sobic005G084500--Sobic006G219600 Sobic004G019800 Sobic004G019800 Sobic005G084500--Sobic004G019800 Sobic005G084500--Sobic004G163800 Sobic001G530900 Sobic001G530900 Sobic005G084500--Sobic001G530900 Sobic005G084500--Sobic001G516901 Sobic004G359100 Sobic004G359100 Sobic002G431300--Sobic004G359100 Sobic002G431300--Sobic003G234900 Sobic002G431300--Sobic004G163800 Sobic002G431300--Sobic002G043600 Sobic006G128300 Sobic006G128300 Sobic002G431300--Sobic006G128300 Sobic006G186600 Sobic006G186600 Sobic002G431300--Sobic006G186600 Sobic002G431300--Sobic006G038500 Sobic002G431300--Sobic002G343400 Sobic002G431300--Sobic003G232700 Sobic004G238200--Sobic003G232700 Sobic004G207400 Sobic004G207400 Sobic004G238200--Sobic004G207400 Sobic004G238200--Sobic001G500600 Sobic004G238200--Sobic005G084500 Sobic004G238200--Sobic001G516901 Sobic002G072400 Sobic002G072400 Sobic004G238200--Sobic002G072400 Sobic004G238200--Sobic007G005400 Sobic004G238200--Sobic006G197300 Sobic006G232600 Sobic006G232600 Sobic004G238200--Sobic006G232600 Sobic002G231200 Sobic002G231200 Sobic001G327800--Sobic002G231200 Sobic005G014700 Sobic005G014700 Sobic001G327800--Sobic005G014700 Sobic001G327800--Sobic004G163800 Sobic003G343400 Sobic003G343400 Sobic001G327800--Sobic003G343400 Sobic005G082200 Sobic005G082200 Sobic001G327800--Sobic005G082200 Sobic009G164400 Sobic009G164400 Sobic001G327800--Sobic009G164400 Sobic001G032700 Sobic001G032700 Sobic001G327800--Sobic001G032700 Sobic004G054400 Sobic004G054400 Sobic001G327800--Sobic004G054400 Sobic001G327800--Sobic003G067100 Sobic002G343400--Sobic004G359100 Sobic002G343400--Sobic004G163800 Sobic002G343400--Sobic003G234900 Sobic001G382800 Sobic001G382800 Sobic002G343400--Sobic001G382800 Sobic001G401700 Sobic001G401700 Sobic002G343400--Sobic001G401700 Sobic002G343400--Sobic001G327800 Sobic002G343400--Sobic002G431300 Sobic004G238900 Sobic004G238900 Sobic002G343400--Sobic004G238900 Sobic002G343400--Sobic003G067100
Octagon: transcription factors


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