Gene annotation
Transcriptome id Sobic.010G136200.2,Sobic.010G136200.1
Synonym
Functional annotation oxidoreductase/ transition metal ion binding protein, putative, expressed
UniProt A0A194YK17 , A0A194YJ06
Pfam -
Panther DB PTHR33740 PTHR33740:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25680 : -
RAP-DB (Rice) LOC_Os06g30390.1 : oxidoreductase/ transition metal ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a042806 , Zm00025a050678
Brachypodium KQK18445
Barley HORVU7Hr1G046700.25 , HORVU7Hr1G046700.24 , HORVU7Hr1G046700.23 , HORVU7Hr1G046700.22 , HORVU7Hr1G046700.21 , HORVU7Hr1G046700.20 , HORVU7Hr1G046700.16 , HORVU7Hr1G046700.17 , HORVU7Hr1G046700.14 , HORVU7Hr1G046700.15 , HORVU7Hr1G046700.12 , HORVU7Hr1G046700.13 , HORVU7Hr1G046700.10 , HORVU7Hr1G046700.11 , HORVU7Hr1G046700.18 , HORVU7Hr1G046700.19 , HORVU7Hr1G046700.4 , HORVU7Hr1G046700.5 , HORVU7Hr1G046700.6 , HORVU7Hr1G046700.7 , HORVU7Hr1G046700.1 , HORVU7Hr1G046700.2 , HORVU7Hr1G046700.3 , HORVU7Hr1G046700.8 , HORVU7Hr1G046700.9
Wheat TraesCS7A02G228700 , TraesCS7D02G229800 , TraesCS7B02G195000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G352500 ribonuclease protein, putative, expressed -
2 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
3 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
4 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
5 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
6 Sobic.002G127550 - -
7 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
8 Sobic.008G011000 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
9 Sobic.003G301300 PPR repeat domain containing protein, putative, expressed -
10 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
11 Sobic.008G044100 expressed protein -
12 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
13 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
14 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase
15 Sobic.001G530900 expressed protein -
16 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
17 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
18 Sobic.001G219700 pentatricopeptide, putative, expressed -
19 Sobic.003G033100 RNA methyltransferase protein, putative, expressed -
20 Sobic.002G316600 expressed protein -


Gene co-expression network
sample Sobic010G136200 Sobic010G136200 Sobic003G352500 Sobic003G352500 Sobic010G136200--Sobic003G352500 Sobic004G163800 Sobic004G163800 Sobic010G136200--Sobic004G163800 Sobic002G043600 Sobic002G043600 Sobic010G136200--Sobic002G043600 Sobic005G084500 Sobic005G084500 Sobic010G136200--Sobic005G084500 Sobic003G232700 Sobic003G232700 Sobic010G136200--Sobic003G232700 Sobic002G127550 Sobic002G127550 Sobic010G136200--Sobic002G127550 Sobic003G067100 Sobic003G067100 Sobic010G136200--Sobic003G067100 Sobic008G011000 Sobic008G011000 Sobic010G136200--Sobic008G011000 Sobic003G301300 Sobic003G301300 Sobic010G136200--Sobic003G301300 Sobic003G352500--Sobic003G232700 Sobic003G352500--Sobic002G043600 Sobic002G181000 Sobic002G181000 Sobic003G352500--Sobic002G181000 Sobic007G185700 Sobic007G185700 Sobic003G352500--Sobic007G185700 Sobic003G141100 Sobic003G141100 Sobic003G352500--Sobic003G141100 Sobic001G054100 Sobic001G054100 Sobic003G352500--Sobic001G054100 Sobic006G270200 Sobic006G270200 Sobic003G352500--Sobic006G270200 Sobic001G028100 Sobic001G028100 Sobic003G352500--Sobic001G028100 Sobic001G500600 Sobic001G500600 Sobic003G352500--Sobic001G500600 Sobic004G120100 Sobic004G120100 Sobic004G163800--Sobic004G120100 Sobic004G163800--Sobic002G043600 Sobic003G234900 Sobic003G234900 Sobic004G163800--Sobic003G234900 Sobic004G163800--Sobic003G232700 Sobic004G163800--Sobic005G084500 Sobic002G431300 Sobic002G431300 Sobic004G163800--Sobic002G431300 Sobic004G238200 Sobic004G238200 Sobic004G163800--Sobic004G238200 Sobic001G327800 Sobic001G327800 Sobic004G163800--Sobic001G327800 Sobic002G343400 Sobic002G343400 Sobic004G163800--Sobic002G343400 Sobic002G043600--Sobic003G232700 Sobic002G043600--Sobic002G181000 Sobic001G516901 Sobic001G516901 Sobic002G043600--Sobic001G516901 Sobic002G043600--Sobic003G352500 Sobic002G043600--Sobic004G163800 Sobic001G495200 Sobic001G495200 Sobic002G043600--Sobic001G495200 Sobic004G011300 Sobic004G011300 Sobic002G043600--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic002G043600--Sobic005G002900 Sobic005G231100 Sobic005G231100 Sobic002G043600--Sobic005G231100 Sobic007G005400 Sobic007G005400 Sobic005G084500--Sobic007G005400 Sobic002G118200 Sobic002G118200 Sobic005G084500--Sobic002G118200 Sobic005G084500--Sobic004G238200 Sobic004G337400 Sobic004G337400 Sobic005G084500--Sobic004G337400 Sobic006G219600 Sobic006G219600 Sobic005G084500--Sobic006G219600 Sobic004G019800 Sobic004G019800 Sobic005G084500--Sobic004G019800 Sobic005G084500--Sobic004G163800 Sobic001G530900 Sobic001G530900 Sobic005G084500--Sobic001G530900 Sobic005G084500--Sobic001G516901 Sobic003G232700--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic003G232700--Sobic006G197300 Sobic003G232700--Sobic002G181000 Sobic003G232700--Sobic002G043600 Sobic003G232700--Sobic001G495200 Sobic003G232700--Sobic003G141100 Sobic003G232700--Sobic003G352500 Sobic003G232700--Sobic004G238200 Sobic003G232700--Sobic003G301300 Sobic003G138500 Sobic003G138500 Sobic002G127550--Sobic003G138500 Sobic010G126000 Sobic010G126000 Sobic002G127550--Sobic010G126000 Sobic008G044100 Sobic008G044100 Sobic002G127550--Sobic008G044100 Sobic004G034800 Sobic004G034800 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic002G127550--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic004G209600 Sobic004G209600 Sobic002G127550--Sobic004G209600 Sobic005G014700 Sobic005G014700 Sobic003G067100--Sobic005G014700 Sobic003G067100--Sobic003G234900 Sobic001G102500 Sobic001G102500 Sobic003G067100--Sobic001G102500 Sobic004G238900 Sobic004G238900 Sobic003G067100--Sobic004G238900 Sobic006G058100 Sobic006G058100 Sobic003G067100--Sobic006G058100 Sobic003G434700 Sobic003G434700 Sobic003G067100--Sobic003G434700 Sobic003G067100--Sobic002G043600 Sobic009G129100 Sobic009G129100 Sobic003G067100--Sobic009G129100 Sobic003G067100--Sobic004G163800 Sobic001G503900 Sobic001G503900 Sobic008G011000--Sobic001G503900 Sobic002G316600 Sobic002G316600 Sobic008G011000--Sobic002G316600 Sobic008G011000--Sobic008G044100 Sobic001G072500 Sobic001G072500 Sobic008G011000--Sobic001G072500 Sobic004G314000 Sobic004G314000 Sobic008G011000--Sobic004G314000 Sobic007G212300 Sobic007G212300 Sobic008G011000--Sobic007G212300 Sobic003G260400 Sobic003G260400 Sobic008G011000--Sobic003G260400 Sobic008G011000--Sobic002G127550 Sobic001G230000 Sobic001G230000 Sobic008G011000--Sobic001G230000 Sobic008G073100 Sobic008G073100 Sobic003G301300--Sobic008G073100 Sobic003G301300--Sobic001G500600 Sobic004G336200 Sobic004G336200 Sobic003G301300--Sobic004G336200 Sobic010G035400 Sobic010G035400 Sobic003G301300--Sobic010G035400 Sobic003G160800 Sobic003G160800 Sobic003G301300--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G301300--Sobic005G110400 Sobic002G406700 Sobic002G406700 Sobic003G301300--Sobic002G406700 Sobic003G301300--Sobic003G232700 Sobic001G126300 Sobic001G126300 Sobic003G301300--Sobic001G126300
Octagon: transcription factors


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