Gene annotation
Transcriptome id Sobic.004G238200.1
Synonym Sb04g028030
Functional annotation arsenical pump-driving ATPase, putative, expressed
UniProt C5XYT4
Pfam PF01656
Panther DB PTHR10803
NCBI CDD KOG2825; Putative arsenite-translocating ATPase
KEGG Orthology K01551; arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G10350 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g51100.1 : arsenical pump-driving ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a022030
Brachypodium KQK01946
Barley HORVU0Hr1G017120.1 , HORVU0Hr1G017120.3 , HORVU0Hr1G017120.2 , HORVU0Hr1G017120.5 , HORVU0Hr1G017120.4 , HORVU0Hr1G017120.6
Wheat TraesCS6B02G336000 , TraesCS6D02G286500 , TraesCS6A02G307400
Populus -


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cDNA sequences
Sobic.004G238200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
2 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
3 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
4 Sobic.005G084500 uncharacterized protein yqxC, putative, expressed K06442: 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase
5 Sobic.001G516901 - -
6 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
7 Sobic.007G005400 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
8 Sobic.006G197300 expressed protein -
9 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
10 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
11 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
12 Sobic.004G019800 MATE domain containing protein, expressed -
13 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
14 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
15 Sobic.003G264800 expressed protein -
16 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
17 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
18 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
19 Sobic.010G140600 bolA, putative, expressed -
20 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2


Gene co-expression network
sample Sobic004G238200 Sobic004G238200 Sobic003G232700 Sobic003G232700 Sobic004G238200--Sobic003G232700 Sobic004G207400 Sobic004G207400 Sobic004G238200--Sobic004G207400 Sobic001G500600 Sobic001G500600 Sobic004G238200--Sobic001G500600 Sobic005G084500 Sobic005G084500 Sobic004G238200--Sobic005G084500 Sobic001G516901 Sobic001G516901 Sobic004G238200--Sobic001G516901 Sobic002G072400 Sobic002G072400 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic006G197300 Sobic006G197300 Sobic004G238200--Sobic006G197300 Sobic006G232600 Sobic006G232600 Sobic004G238200--Sobic006G232600 Sobic003G232700--Sobic001G500600 Sobic003G232700--Sobic006G197300 Sobic002G181000 Sobic002G181000 Sobic003G232700--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic003G232700--Sobic002G043600 Sobic001G495200 Sobic001G495200 Sobic003G232700--Sobic001G495200 Sobic003G141100 Sobic003G141100 Sobic003G232700--Sobic003G141100 Sobic003G352500 Sobic003G352500 Sobic003G232700--Sobic003G352500 Sobic003G232700--Sobic004G238200 Sobic003G301300 Sobic003G301300 Sobic003G232700--Sobic003G301300 Sobic004G207400--Sobic002G072400 Sobic004G207400--Sobic006G232600 Sobic004G207400--Sobic004G238200 Sobic009G170200 Sobic009G170200 Sobic004G207400--Sobic009G170200 Sobic003G203300 Sobic003G203300 Sobic004G207400--Sobic003G203300 Sobic002G225100 Sobic002G225100 Sobic004G207400--Sobic002G225100 Sobic004G300100 Sobic004G300100 Sobic004G207400--Sobic004G300100 Sobic004G281900 Sobic004G281900 Sobic004G207400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic004G207400--Sobic007G166200 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic001G500600--Sobic003G141100 Sobic001G500600--Sobic003G232700 Sobic003G287900 Sobic003G287900 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic005G084500--Sobic007G005400 Sobic002G118200 Sobic002G118200 Sobic005G084500--Sobic002G118200 Sobic005G084500--Sobic004G238200 Sobic004G337400 Sobic004G337400 Sobic005G084500--Sobic004G337400 Sobic006G219600 Sobic006G219600 Sobic005G084500--Sobic006G219600 Sobic004G019800 Sobic004G019800 Sobic005G084500--Sobic004G019800 Sobic004G163800 Sobic004G163800 Sobic005G084500--Sobic004G163800 Sobic001G530900 Sobic001G530900 Sobic005G084500--Sobic001G530900 Sobic005G084500--Sobic001G516901 Sobic001G516901--Sobic001G500600 Sobic001G516901--Sobic006G197300 Sobic001G516901--Sobic004G336200 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic003G160800 Sobic003G160800 Sobic001G516901--Sobic003G160800 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic002G072400--Sobic004G281900 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic003G085100 Sobic003G085100 Sobic007G005400--Sobic003G085100 Sobic007G005400--Sobic002G118200 Sobic007G005400--Sobic005G084500 Sobic007G005400--Sobic004G238200 Sobic003G150800 Sobic003G150800 Sobic007G005400--Sobic003G150800 Sobic007G005400--Sobic003G287900 Sobic005G231100 Sobic005G231100 Sobic007G005400--Sobic005G231100 Sobic007G005400--Sobic004G337400 Sobic007G185700 Sobic007G185700 Sobic007G005400--Sobic007G185700 Sobic006G197300--Sobic001G500600 Sobic006G197300--Sobic004G336200 Sobic006G197300--Sobic003G232700 Sobic006G197300--Sobic003G094350 Sobic006G197300--Sobic001G516901 Sobic006G197300--Sobic003G070900 Sobic006G197300--Sobic003G287900 Sobic001G436400 Sobic001G436400 Sobic006G197300--Sobic001G436400 Sobic007G103400 Sobic007G103400 Sobic006G197300--Sobic007G103400 Sobic006G232600--Sobic009G170200 Sobic007G087100 Sobic007G087100 Sobic006G232600--Sobic007G087100 Sobic003G003450 Sobic003G003450 Sobic006G232600--Sobic003G003450 Sobic001G378100 Sobic001G378100 Sobic006G232600--Sobic001G378100 Sobic009G073900 Sobic009G073900 Sobic006G232600--Sobic009G073900 Sobic006G233700 Sobic006G233700 Sobic006G232600--Sobic006G233700 Sobic009G103000 Sobic009G103000 Sobic006G232600--Sobic009G103000 Sobic001G077300 Sobic001G077300 Sobic006G232600--Sobic001G077300 Sobic006G232600--Sobic002G081400
Octagon: transcription factors


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