Gene annotation
Transcriptome id Sobic.001G516901.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBI4
Pfam PF07884
Panther DB PTHR34573 PTHR34573:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35760 : NAD(P)H dehydrogenase (quinone)s
RAP-DB (Rice) LOC_Os03g03949.2 : electron carrier/ protein disulfide oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a000452
Brachypodium PNT78259
Barley HORVU4Hr1G081770.7 , HORVU4Hr1G081770.6 , HORVU4Hr1G081770.5 , HORVU4Hr1G081770.4 , HORVU4Hr1G081770.3 , HORVU4Hr1G081770.2 , HORVU4Hr1G081770.1 , HORVU4Hr1G081770.9 , HORVU4Hr1G081770.8 , HORVU4Hr1G081770.16 , HORVU4Hr1G081770.15 , HORVU4Hr1G081770.14 , HORVU4Hr1G081770.13 , HORVU4Hr1G081770.12 , HORVU4Hr1G081770.11 , HORVU4Hr1G081770.10
Wheat TraesCS4B02G326400 , TraesCS5A02G498500 , TraesCS4D02G323200 , TraesCS4D02G323200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
2 Sobic.006G197300 expressed protein -
3 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
4 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
5 Sobic.009G024300 inner membrane protein alx, putative, expressed -
6 Sobic.010G035400 expressed protein -
7 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
8 Sobic.002G258600 expressed protein -
9 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
11 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
12 Sobic.003G301300 PPR repeat domain containing protein, putative, expressed -
13 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
14 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
15 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
16 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
17 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
18 Sobic.004G019800 MATE domain containing protein, expressed -
19 Sobic.007G103400 expressed protein -
20 Sobic.007G162600 uncharacterized protein all1601, putative, expressed K18010: 7-hydroxymethyl chlorophyll a reductase


Gene co-expression network
sample Sobic001G516901 Sobic001G516901 Sobic001G500600 Sobic001G500600 Sobic001G516901--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic001G516901--Sobic006G197300 Sobic004G336200 Sobic004G336200 Sobic001G516901--Sobic004G336200 Sobic002G043600 Sobic002G043600 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic003G160800 Sobic003G160800 Sobic001G516901--Sobic003G160800 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic003G287900 Sobic003G287900 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic006G197300--Sobic001G500600 Sobic006G197300--Sobic004G336200 Sobic006G197300--Sobic003G232700 Sobic006G197300--Sobic003G094350 Sobic006G197300--Sobic001G516901 Sobic006G197300--Sobic003G070900 Sobic006G197300--Sobic003G287900 Sobic001G436400 Sobic001G436400 Sobic006G197300--Sobic001G436400 Sobic007G103400 Sobic007G103400 Sobic006G197300--Sobic007G103400 Sobic002G401800 Sobic002G401800 Sobic004G336200--Sobic002G401800 Sobic004G336200--Sobic010G035400 Sobic004G336200--Sobic001G500600 Sobic003G387100 Sobic003G387100 Sobic004G336200--Sobic003G387100 Sobic004G336200--Sobic003G160800 Sobic008G073100 Sobic008G073100 Sobic004G336200--Sobic008G073100 Sobic001G134700 Sobic001G134700 Sobic004G336200--Sobic001G134700 Sobic005G110400 Sobic005G110400 Sobic004G336200--Sobic005G110400 Sobic004G336200--Sobic006G197300 Sobic002G043600--Sobic003G232700 Sobic002G181000 Sobic002G181000 Sobic002G043600--Sobic002G181000 Sobic002G043600--Sobic001G516901 Sobic003G352500 Sobic003G352500 Sobic002G043600--Sobic003G352500 Sobic004G163800 Sobic004G163800 Sobic002G043600--Sobic004G163800 Sobic001G495200 Sobic001G495200 Sobic002G043600--Sobic001G495200 Sobic004G011300 Sobic004G011300 Sobic002G043600--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic002G043600--Sobic005G002900 Sobic005G231100 Sobic005G231100 Sobic002G043600--Sobic005G231100 Sobic009G024300--Sobic001G516901 Sobic009G024300--Sobic002G258600 Sobic004G328400 Sobic004G328400 Sobic009G024300--Sobic004G328400 Sobic003G151500 Sobic003G151500 Sobic009G024300--Sobic003G151500 Sobic009G024300--Sobic001G500600 Sobic007G162600 Sobic007G162600 Sobic009G024300--Sobic007G162600 Sobic009G024300--Sobic003G287900 Sobic003G085100 Sobic003G085100 Sobic009G024300--Sobic003G085100 Sobic005G063000 Sobic005G063000 Sobic009G024300--Sobic005G063000 Sobic010G035400--Sobic007G103400 Sobic007G225500 Sobic007G225500 Sobic010G035400--Sobic007G225500 Sobic010G035400--Sobic004G336200 Sobic004G353100 Sobic004G353100 Sobic010G035400--Sobic004G353100 Sobic009G237000 Sobic009G237000 Sobic010G035400--Sobic009G237000 Sobic002G275300 Sobic002G275300 Sobic010G035400--Sobic002G275300 Sobic010G035400--Sobic003G160800 Sobic006G207800 Sobic006G207800 Sobic010G035400--Sobic006G207800 Sobic010G035400--Sobic003G387100 Sobic004G238200--Sobic003G232700 Sobic004G207400 Sobic004G207400 Sobic004G238200--Sobic004G207400 Sobic004G238200--Sobic001G500600 Sobic005G084500 Sobic005G084500 Sobic004G238200--Sobic005G084500 Sobic004G238200--Sobic001G516901 Sobic002G072400 Sobic002G072400 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic004G238200--Sobic006G197300 Sobic006G232600 Sobic006G232600 Sobic004G238200--Sobic006G232600 Sobic008G074000 Sobic008G074000 Sobic002G258600--Sobic008G074000 Sobic001G183000 Sobic001G183000 Sobic002G258600--Sobic001G183000 Sobic004G019800 Sobic004G019800 Sobic002G258600--Sobic004G019800 Sobic002G258600--Sobic009G024300 Sobic002G258600--Sobic009G237000 Sobic002G118200 Sobic002G118200 Sobic002G258600--Sobic002G118200 Sobic002G258600--Sobic001G516901 Sobic002G258600--Sobic007G162600 Sobic002G258600--Sobic003G287900 Sobic003G160800--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic003G160800--Sobic005G100300 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic003G160800--Sobic007G103400 Sobic002G112400 Sobic002G112400 Sobic003G160800--Sobic002G112400 Sobic003G233700 Sobic003G233700 Sobic003G160800--Sobic003G233700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500
Octagon: transcription factors


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