Gene annotation
Transcriptome id Sobic.010G171600.1,Sobic.010G171600.2,Sobic.010G171600.3
Synonym MAPKKK8, ATMEKK1, MEKK1, ARAKIN, Sb10g022420
Functional annotation STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A194YKU2 , A0A194YJT7
Pfam PF00069 PF14531 PF14531 PF00069
Panther DB PTHR24361:SF318 PTHR24361 PTHR24361 PTHR24361:SF318
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0198MEKK and related serine/threonine protein kinases
KEGG Orthology K04733; interleukin-1 receptor-associated kinase 4
Gene Ontology GO:0004672; protein kinase activity GO:0005524ATP binding GO:0006468protein phosphorylation GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G11300 : MAPK/ERK kinase kinase 1,protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
RAP-DB (Rice) LOC_Os03g15570.1 : STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a052821 , Zm00025a001695
Brachypodium KQK01712
Barley HORVU7Hr1G109200.1
Wheat TraesCS3B02G001200 , TraesCS7B02G494200 , TraesCS2A02G024200 , TraesCS2B02G038000 , TraesCS2B02G036700 , TraesCS2B02G036700 , TraesCS7B02G494500 , TraesCS7B02G446500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
2 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
3 Sobic.003G233700 SET domain-containing protein, putative, expressed -
4 Sobic.007G103400 expressed protein -
5 Sobic.001G516901 - -
6 Sobic.006G197300 expressed protein -
7 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
8 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
9 Sobic.004G336200 OsClp6 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
11 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
12 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
13 Sobic.004G019800 MATE domain containing protein, expressed -
14 Sobic.004G353100 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
15 Sobic.003G264800 expressed protein -
16 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
17 Sobic.008G006100 MATE efflux protein, putative, expressed -
18 Sobic.003G306600 acetamidase, putative, expressed K01455: formamidase
19 Sobic.001G504400 expressed protein -
20 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic010G171600 Sobic010G171600 Sobic001G500600 Sobic001G500600 Sobic010G171600--Sobic001G500600 Sobic006G233700 Sobic006G233700 Sobic010G171600--Sobic006G233700 Sobic003G233700 Sobic003G233700 Sobic010G171600--Sobic003G233700 Sobic007G103400 Sobic007G103400 Sobic010G171600--Sobic007G103400 Sobic001G516901 Sobic001G516901 Sobic010G171600--Sobic001G516901 Sobic006G197300 Sobic006G197300 Sobic010G171600--Sobic006G197300 Sobic008G074000 Sobic008G074000 Sobic010G171600--Sobic008G074000 Sobic003G287900 Sobic003G287900 Sobic010G171600--Sobic003G287900 Sobic004G336200 Sobic004G336200 Sobic010G171600--Sobic004G336200 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic006G232600 Sobic006G232600 Sobic006G233700--Sobic006G232600 Sobic006G233700--Sobic001G500600 Sobic010G110400 Sobic010G110400 Sobic006G233700--Sobic010G110400 Sobic009G170200 Sobic009G170200 Sobic006G233700--Sobic009G170200 Sobic001G060500 Sobic001G060500 Sobic006G233700--Sobic001G060500 Sobic003G203300 Sobic003G203300 Sobic006G233700--Sobic003G203300 Sobic006G233700--Sobic010G171600 Sobic006G233700--Sobic003G070900 Sobic001G219700 Sobic001G219700 Sobic006G233700--Sobic001G219700 Sobic003G233700--Sobic007G103400 Sobic003G233700--Sobic003G287900 Sobic004G353100 Sobic004G353100 Sobic003G233700--Sobic004G353100 Sobic003G233700--Sobic002G133900 Sobic009G237000 Sobic009G237000 Sobic003G233700--Sobic009G237000 Sobic003G160800 Sobic003G160800 Sobic003G233700--Sobic003G160800 Sobic003G233700--Sobic008G074000 Sobic003G233700--Sobic003G094350 Sobic003G233700--Sobic001G500600 Sobic007G103400--Sobic009G237000 Sobic002G298800 Sobic002G298800 Sobic007G103400--Sobic002G298800 Sobic007G103400--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic007G103400--Sobic010G035400 Sobic001G504400 Sobic001G504400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300 Sobic001G516901--Sobic001G500600 Sobic001G516901--Sobic006G197300 Sobic001G516901--Sobic004G336200 Sobic002G043600 Sobic002G043600 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic001G516901--Sobic003G160800 Sobic006G197300--Sobic001G500600 Sobic006G197300--Sobic004G336200 Sobic006G197300--Sobic003G232700 Sobic006G197300--Sobic003G094350 Sobic006G197300--Sobic001G516901 Sobic006G197300--Sobic003G070900 Sobic006G197300--Sobic003G287900 Sobic001G436400 Sobic001G436400 Sobic006G197300--Sobic001G436400 Sobic006G197300--Sobic007G103400 Sobic008G074000--Sobic003G070900 Sobic008G074000--Sobic007G103400 Sobic008G074000--Sobic002G133900 Sobic008G074000--Sobic003G233700 Sobic008G074000--Sobic009G237000 Sobic008G074000--Sobic001G504400 Sobic008G074000--Sobic004G353100 Sobic008G074000--Sobic009G170200 Sobic009G219100 Sobic009G219100 Sobic008G074000--Sobic009G219100 Sobic003G287900--Sobic003G070900 Sobic003G287900--Sobic002G133900 Sobic003G287900--Sobic003G094350 Sobic003G287900--Sobic003G233700 Sobic003G287900--Sobic001G500600 Sobic003G287900--Sobic004G353100 Sobic003G287900--Sobic004G336200 Sobic003G287900--Sobic008G074000 Sobic003G287900--Sobic009G170200 Sobic002G401800 Sobic002G401800 Sobic004G336200--Sobic002G401800 Sobic004G336200--Sobic010G035400 Sobic004G336200--Sobic001G500600 Sobic003G387100 Sobic003G387100 Sobic004G336200--Sobic003G387100 Sobic004G336200--Sobic003G160800 Sobic008G073100 Sobic008G073100 Sobic004G336200--Sobic008G073100 Sobic001G134700 Sobic001G134700 Sobic004G336200--Sobic001G134700 Sobic005G110400 Sobic005G110400 Sobic004G336200--Sobic005G110400 Sobic004G336200--Sobic006G197300
Octagon: transcription factors


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