Gene annotation
Transcriptome id Sobic.004G359100.2
Synonym Sb04g038580
Functional annotation expressed protein
UniProt A0A1Z5RR47
Pfam PF05542
Panther DB PTHR33598:SF4 PTHR33598
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G63610 : -
RAP-DB (Rice) LOC_Os02g58650.1 : expressed protein
MaizeGDB (Corn) Zm00025a032694
Brachypodium KQK02188
Barley HORVU6Hr1G095250.8 , HORVU6Hr1G095250.7 , HORVU6Hr1G095250.6 , HORVU6Hr1G095250.5 , HORVU6Hr1G095250.4 , HORVU6Hr1G095250.3 , HORVU6Hr1G095250.2 , HORVU6Hr1G095250.1 , HORVU6Hr1G095250.9
Wheat TraesCS6D02G408000 , TraesCS6A02G418600
Populus -


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cDNA sequences
Sobic.004G359100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G343400 tic20, putative, expressed -
2 Sobic.002G431300 uncharacterized ACR, YagE family COG1723 containing protein, expressed -
3 Sobic.005G082200 ACT domain containing protein, expressed K01653: E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
4 Sobic.004G238900 methyltransferase domain containing protein, putative, expressed -
5 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
6 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
7 Sobic.003G083400 cytoskeletal protein, putative, expressed -
8 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
9 Sobic.006G088000 translocon Tic40, putative, expressed -
10 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
11 Sobic.004G163800 neutral/alkaline invertase, putative, expressed -
12 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
13 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
14 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
15 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
16 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
17 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
18 Sobic.006G105800 tyrosyl-tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
19 Sobic.008G130900 ribosomal protein S6, putative, expressed -
20 Sobic.005G072100 preprotein translocase secA family protein, putative, expressed K03070: preprotein translocase subunit SecA


Gene co-expression network
sample Sobic004G359100 Sobic004G359100 Sobic002G343400 Sobic002G343400 Sobic004G359100--Sobic002G343400 Sobic002G431300 Sobic002G431300 Sobic004G359100--Sobic002G431300 Sobic005G082200 Sobic005G082200 Sobic004G359100--Sobic005G082200 Sobic004G238900 Sobic004G238900 Sobic004G359100--Sobic004G238900 Sobic003G067100 Sobic003G067100 Sobic004G359100--Sobic003G067100 Sobic010G255100 Sobic010G255100 Sobic004G359100--Sobic010G255100 Sobic003G083400 Sobic003G083400 Sobic004G359100--Sobic003G083400 Sobic001G375000 Sobic001G375000 Sobic004G359100--Sobic001G375000 Sobic006G088000 Sobic006G088000 Sobic004G359100--Sobic006G088000 Sobic002G343400--Sobic004G359100 Sobic004G163800 Sobic004G163800 Sobic002G343400--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic002G343400--Sobic003G234900 Sobic001G382800 Sobic001G382800 Sobic002G343400--Sobic001G382800 Sobic001G401700 Sobic001G401700 Sobic002G343400--Sobic001G401700 Sobic001G327800 Sobic001G327800 Sobic002G343400--Sobic001G327800 Sobic002G343400--Sobic002G431300 Sobic002G343400--Sobic004G238900 Sobic002G343400--Sobic003G067100 Sobic002G431300--Sobic004G359100 Sobic002G431300--Sobic003G234900 Sobic002G431300--Sobic004G163800 Sobic002G043600 Sobic002G043600 Sobic002G431300--Sobic002G043600 Sobic006G128300 Sobic006G128300 Sobic002G431300--Sobic006G128300 Sobic006G186600 Sobic006G186600 Sobic002G431300--Sobic006G186600 Sobic006G038500 Sobic006G038500 Sobic002G431300--Sobic006G038500 Sobic002G431300--Sobic002G343400 Sobic003G232700 Sobic003G232700 Sobic002G431300--Sobic003G232700 Sobic008G051300 Sobic008G051300 Sobic005G082200--Sobic008G051300 Sobic005G082200--Sobic001G327800 Sobic005G082200--Sobic004G359100 Sobic005G082200--Sobic002G343400 Sobic005G082200--Sobic003G067100 Sobic002G424700 Sobic002G424700 Sobic005G082200--Sobic002G424700 Sobic005G072100 Sobic005G072100 Sobic005G082200--Sobic005G072100 Sobic004G054400 Sobic004G054400 Sobic005G082200--Sobic004G054400 Sobic002G293600 Sobic002G293600 Sobic005G082200--Sobic002G293600 Sobic004G238900--Sobic003G067100 Sobic005G014700 Sobic005G014700 Sobic004G238900--Sobic005G014700 Sobic004G238900--Sobic004G359100 Sobic001G102500 Sobic001G102500 Sobic004G238900--Sobic001G102500 Sobic004G238900--Sobic002G343400 Sobic003G369400 Sobic003G369400 Sobic004G238900--Sobic003G369400 Sobic007G023200 Sobic007G023200 Sobic004G238900--Sobic007G023200 Sobic004G238900--Sobic010G255100 Sobic004G238900--Sobic004G163800 Sobic003G067100--Sobic005G014700 Sobic003G067100--Sobic003G234900 Sobic003G067100--Sobic001G102500 Sobic003G067100--Sobic004G238900 Sobic006G058100 Sobic006G058100 Sobic003G067100--Sobic006G058100 Sobic003G434700 Sobic003G434700 Sobic003G067100--Sobic003G434700 Sobic003G067100--Sobic002G043600 Sobic009G129100 Sobic009G129100 Sobic003G067100--Sobic009G129100 Sobic003G067100--Sobic004G163800 Sobic006G256600 Sobic006G256600 Sobic010G255100--Sobic006G256600 Sobic003G085000 Sobic003G085000 Sobic010G255100--Sobic003G085000 Sobic010G255100--Sobic001G382800 Sobic006G055800 Sobic006G055800 Sobic010G255100--Sobic006G055800 Sobic010G255100--Sobic005G014700 Sobic003G128400 Sobic003G128400 Sobic010G255100--Sobic003G128400 Sobic006G210400 Sobic006G210400 Sobic010G255100--Sobic006G210400 Sobic001G308200 Sobic001G308200 Sobic010G255100--Sobic001G308200 Sobic010G255100--Sobic001G102500 Sobic003G083400--Sobic004G359100 Sobic002G411400 Sobic002G411400 Sobic003G083400--Sobic002G411400 Sobic003G083400--Sobic003G128400 Sobic003G083400--Sobic001G375000 Sobic003G083400--Sobic004G238900 Sobic003G083400--Sobic006G088000 Sobic004G011300 Sobic004G011300 Sobic003G083400--Sobic004G011300 Sobic004G336000 Sobic004G336000 Sobic003G083400--Sobic004G336000 Sobic008G130900 Sobic008G130900 Sobic003G083400--Sobic008G130900 Sobic001G375000--Sobic003G128400 Sobic003G162800 Sobic003G162800 Sobic001G375000--Sobic003G162800 Sobic001G375000--Sobic006G088000 Sobic004G003900 Sobic004G003900 Sobic001G375000--Sobic004G003900 Sobic003G045300 Sobic003G045300 Sobic001G375000--Sobic003G045300 Sobic010G027200 Sobic010G027200 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic006G237100 Sobic006G237100 Sobic001G375000--Sobic006G237100 Sobic002G156100 Sobic002G156100 Sobic001G375000--Sobic002G156100 Sobic006G088000--Sobic001G375000 Sobic006G088000--Sobic003G128400 Sobic006G088000--Sobic004G003900 Sobic006G088000--Sobic001G382800 Sobic006G088000--Sobic003G162800 Sobic006G088000--Sobic003G045300 Sobic001G249400 Sobic001G249400 Sobic006G088000--Sobic001G249400 Sobic006G088000--Sobic010G255100 Sobic008G090900 Sobic008G090900 Sobic006G088000--Sobic008G090900
Octagon: transcription factors


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