Gene annotation
Transcriptome id Sobic.005G082200.1
Synonym Sb05g006620
Functional annotation ACT domain containing protein, expressed
UniProt C5Y7K7
Pfam PF13710 PF10369
Panther DB PTHR30239 PTHR30239:SF6
NCBI CDD KOG2663; Acetolactate synthase, small subunit
KEGG Orthology K01653; E2.2.1.6S, ilvH, acetolactate synthase I/III small subunit
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31810 : ACT domain-containing small subunit of acetolactate synthase protein
RAP-DB (Rice) LOC_Os11g14950.1 : ACT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a015603
Brachypodium KQJ88740
Barley HORVU4Hr1G014750.3 , HORVU4Hr1G014750.2 , HORVU4Hr1G014750.1 , HORVU4Hr1G014750.7 , HORVU4Hr1G014750.6 , HORVU4Hr1G014750.5 , HORVU4Hr1G014750.4 , HORVU4Hr1G014750.9 , HORVU4Hr1G014750.8 , HORVU4Hr1G014750.12 , HORVU4Hr1G014750.11 , HORVU4Hr1G014750.10
Wheat TraesCS4B02G085900 , TraesCS4D02G083900 , TraesCS6B02G307900 , TraesCS4A02G230000
Populus -


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cDNA sequences
Sobic.005G082200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G051300 acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
2 Sobic.001G327800 uncharacterized mscS family protein, putative, expressed K16052: ynaI, MscS family membrane protein
3 Sobic.004G359100 expressed protein -
4 Sobic.002G343400 tic20, putative, expressed -
5 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
6 Sobic.002G424700 ATPOT1, putative, expressed -
7 Sobic.005G072100 preprotein translocase secA family protein, putative, expressed K03070: preprotein translocase subunit SecA
8 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
9 Sobic.002G293600 cysteinyl-tRNA synthetase, putative, expressed K01883: CARS, cysteinyl-tRNA synthetase
10 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
11 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
12 Sobic.009G164400 expressed protein K10703: HACD, PHS1, very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
13 Sobic.002G431300 uncharacterized ACR, YagE family COG1723 containing protein, expressed -
14 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
15 Sobic.003G418100 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
16 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
17 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
18 Sobic.002G118200 tetratricopeptide repeat domain containing protein, putative, expressed K03255: TIF31, protein TIF31
19 Sobic.006G105800 tyrosyl-tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
20 Sobic.002G231200 Rf1, mitochondrial precursor, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1


Gene co-expression network
sample Sobic005G082200 Sobic005G082200 Sobic008G051300 Sobic008G051300 Sobic005G082200--Sobic008G051300 Sobic001G327800 Sobic001G327800 Sobic005G082200--Sobic001G327800 Sobic004G359100 Sobic004G359100 Sobic005G082200--Sobic004G359100 Sobic002G343400 Sobic002G343400 Sobic005G082200--Sobic002G343400 Sobic003G067100 Sobic003G067100 Sobic005G082200--Sobic003G067100 Sobic002G424700 Sobic002G424700 Sobic005G082200--Sobic002G424700 Sobic005G072100 Sobic005G072100 Sobic005G082200--Sobic005G072100 Sobic004G054400 Sobic004G054400 Sobic005G082200--Sobic004G054400 Sobic002G293600 Sobic002G293600 Sobic005G082200--Sobic002G293600 Sobic008G051300--Sobic005G082200 Sobic004G079800 Sobic004G079800 Sobic008G051300--Sobic004G079800 Sobic006G105800 Sobic006G105800 Sobic008G051300--Sobic006G105800 Sobic008G051300--Sobic004G359100 Sobic002G118200 Sobic002G118200 Sobic008G051300--Sobic002G118200 Sobic007G005400 Sobic007G005400 Sobic008G051300--Sobic007G005400 Sobic003G085100 Sobic003G085100 Sobic008G051300--Sobic003G085100 Sobic004G235600 Sobic004G235600 Sobic008G051300--Sobic004G235600 Sobic003G150800 Sobic003G150800 Sobic008G051300--Sobic003G150800 Sobic002G231200 Sobic002G231200 Sobic001G327800--Sobic002G231200 Sobic005G014700 Sobic005G014700 Sobic001G327800--Sobic005G014700 Sobic004G163800 Sobic004G163800 Sobic001G327800--Sobic004G163800 Sobic003G343400 Sobic003G343400 Sobic001G327800--Sobic003G343400 Sobic001G327800--Sobic005G082200 Sobic009G164400 Sobic009G164400 Sobic001G327800--Sobic009G164400 Sobic001G032700 Sobic001G032700 Sobic001G327800--Sobic001G032700 Sobic001G327800--Sobic004G054400 Sobic001G327800--Sobic003G067100 Sobic004G359100--Sobic002G343400 Sobic002G431300 Sobic002G431300 Sobic004G359100--Sobic002G431300 Sobic004G359100--Sobic005G082200 Sobic004G238900 Sobic004G238900 Sobic004G359100--Sobic004G238900 Sobic004G359100--Sobic003G067100 Sobic010G255100 Sobic010G255100 Sobic004G359100--Sobic010G255100 Sobic003G083400 Sobic003G083400 Sobic004G359100--Sobic003G083400 Sobic001G375000 Sobic001G375000 Sobic004G359100--Sobic001G375000 Sobic006G088000 Sobic006G088000 Sobic004G359100--Sobic006G088000 Sobic002G343400--Sobic004G359100 Sobic002G343400--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic002G343400--Sobic003G234900 Sobic001G382800 Sobic001G382800 Sobic002G343400--Sobic001G382800 Sobic001G401700 Sobic001G401700 Sobic002G343400--Sobic001G401700 Sobic002G343400--Sobic001G327800 Sobic002G343400--Sobic002G431300 Sobic002G343400--Sobic004G238900 Sobic002G343400--Sobic003G067100 Sobic003G067100--Sobic005G014700 Sobic003G067100--Sobic003G234900 Sobic001G102500 Sobic001G102500 Sobic003G067100--Sobic001G102500 Sobic003G067100--Sobic004G238900 Sobic006G058100 Sobic006G058100 Sobic003G067100--Sobic006G058100 Sobic003G434700 Sobic003G434700 Sobic003G067100--Sobic003G434700 Sobic002G043600 Sobic002G043600 Sobic003G067100--Sobic002G043600 Sobic009G129100 Sobic009G129100 Sobic003G067100--Sobic009G129100 Sobic003G067100--Sobic004G163800 Sobic001G145000 Sobic001G145000 Sobic002G424700--Sobic001G145000 Sobic004G334300 Sobic004G334300 Sobic002G424700--Sobic004G334300 Sobic004G244900 Sobic004G244900 Sobic002G424700--Sobic004G244900 Sobic001G519900 Sobic001G519900 Sobic002G424700--Sobic001G519900 Sobic007G103100 Sobic007G103100 Sobic002G424700--Sobic007G103100 Sobic007G185300 Sobic007G185300 Sobic002G424700--Sobic007G185300 Sobic002G275700 Sobic002G275700 Sobic002G424700--Sobic002G275700 Sobic002G424700--Sobic005G072100 Sobic007G090403 Sobic007G090403 Sobic002G424700--Sobic007G090403 Sobic005G072100--Sobic003G434700 Sobic005G072100--Sobic003G067100 Sobic005G072100--Sobic009G129100 Sobic003G168100 Sobic003G168100 Sobic005G072100--Sobic003G168100 Sobic002G127550 Sobic002G127550 Sobic005G072100--Sobic002G127550 Sobic002G316600 Sobic002G316600 Sobic005G072100--Sobic002G316600 Sobic005G072100--Sobic001G145000 Sobic005G072100--Sobic003G234900 Sobic005G072100--Sobic004G244900 Sobic001G124800 Sobic001G124800 Sobic004G054400--Sobic001G124800 Sobic001G309300 Sobic001G309300 Sobic004G054400--Sobic001G309300 Sobic003G387100 Sobic003G387100 Sobic004G054400--Sobic003G387100 Sobic004G054400--Sobic001G032700 Sobic008G001900 Sobic008G001900 Sobic004G054400--Sobic008G001900 Sobic001G516901 Sobic001G516901 Sobic004G054400--Sobic001G516901 Sobic001G512500 Sobic001G512500 Sobic004G054400--Sobic001G512500 Sobic004G336000 Sobic004G336000 Sobic004G054400--Sobic004G336000 Sobic006G010900 Sobic006G010900 Sobic004G054400--Sobic006G010900 Sobic002G293600--Sobic001G382800 Sobic002G293600--Sobic003G067100 Sobic003G040000 Sobic003G040000 Sobic002G293600--Sobic003G040000 Sobic003G149300 Sobic003G149300 Sobic002G293600--Sobic003G149300 Sobic002G293600--Sobic009G129100 Sobic007G095500 Sobic007G095500 Sobic002G293600--Sobic007G095500 Sobic002G293600--Sobic006G058100 Sobic003G128400 Sobic003G128400 Sobic002G293600--Sobic003G128400 Sobic002G293600--Sobic003G434700
Octagon: transcription factors


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