Gene annotation
Transcriptome id Sobic.002G000600.1
Synonym Sb02g000240, SQD2
Functional annotation glycosyl transferase, group 1 domain containing protein, expressed
UniProt C5X6I7
Pfam PF13579 PF00534
Panther DB PTHR12526 PTHR12526:SF372
NCBI CDD KOG1111; N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase
KEGG Orthology K06119; sulfoquinovosyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01220 : sulfoquinovosyldiacylglycerol 2
RAP-DB (Rice) LOC_Os07g01030.1 : glycosyl transferase, group 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044813
Brachypodium KQK21271
Barley HORVU2Hr1G065110.9 , HORVU2Hr1G065110.8 , HORVU2Hr1G065110.3 , HORVU2Hr1G065110.2 , HORVU2Hr1G065110.1 , HORVU2Hr1G065110.7 , HORVU2Hr1G065110.6 , HORVU2Hr1G065110.5 , HORVU2Hr1G065110.4
Wheat TraesCS2B02G287500 , TraesCS4B02G214000 , TraesCS2D02G267700 , TraesCS4A02G090600 , TraesCS2A02G268700
Populus -


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cDNA sequences
Sobic.002G000600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G232700 peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
2 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
3 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
4 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
5 Sobic.006G197300 expressed protein -
6 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
7 Sobic.001G516901 - -
8 Sobic.004G328400 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
9 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
10 Sobic.004G281900 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed K01770: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
11 Sobic.004G248400 APO, putative, expressed -
12 Sobic.005G036100 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
13 Sobic.002G168300 RGH2B, putative, expressed -
14 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
15 Sobic.007G162600 uncharacterized protein all1601, putative, expressed K18010: 7-hydroxymethyl chlorophyll a reductase
16 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
17 Sobic.001G102500 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed K03527: ispH, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
18 Sobic.001G098301 - -
19 Sobic.004G333400 COBW domain containing protein, putative, expressed -
20 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase


Gene co-expression network
sample Sobic002G000600 Sobic002G000600 Sobic003G232700 Sobic003G232700 Sobic002G000600--Sobic003G232700 Sobic004G178100 Sobic004G178100 Sobic002G000600--Sobic004G178100 Sobic003G141100 Sobic003G141100 Sobic002G000600--Sobic003G141100 Sobic008G062400 Sobic008G062400 Sobic002G000600--Sobic008G062400 Sobic006G197300 Sobic006G197300 Sobic002G000600--Sobic006G197300 Sobic007G023200 Sobic007G023200 Sobic002G000600--Sobic007G023200 Sobic001G516901 Sobic001G516901 Sobic002G000600--Sobic001G516901 Sobic004G328400 Sobic004G328400 Sobic002G000600--Sobic004G328400 Sobic001G500600 Sobic001G500600 Sobic002G000600--Sobic001G500600 Sobic003G232700--Sobic001G500600 Sobic003G232700--Sobic006G197300 Sobic002G181000 Sobic002G181000 Sobic003G232700--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic003G232700--Sobic002G043600 Sobic001G495200 Sobic001G495200 Sobic003G232700--Sobic001G495200 Sobic003G232700--Sobic003G141100 Sobic003G352500 Sobic003G352500 Sobic003G232700--Sobic003G352500 Sobic004G238200 Sobic004G238200 Sobic003G232700--Sobic004G238200 Sobic003G301300 Sobic003G301300 Sobic003G232700--Sobic003G301300 Sobic004G178100--Sobic002G000600 Sobic002G020400 Sobic002G020400 Sobic004G178100--Sobic002G020400 Sobic010G043800 Sobic010G043800 Sobic004G178100--Sobic010G043800 Sobic006G173600 Sobic006G173600 Sobic004G178100--Sobic006G173600 Sobic006G158100 Sobic006G158100 Sobic004G178100--Sobic006G158100 Sobic001G198100 Sobic001G198100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G337400 Sobic004G337400 Sobic004G178100--Sobic004G337400 Sobic004G178100--Sobic001G516901 Sobic003G141100--Sobic001G500600 Sobic003G141100--Sobic004G328400 Sobic004G336200 Sobic004G336200 Sobic003G141100--Sobic004G336200 Sobic003G141100--Sobic003G232700 Sobic003G372900 Sobic003G372900 Sobic003G141100--Sobic003G372900 Sobic001G054100 Sobic001G054100 Sobic003G141100--Sobic001G054100 Sobic009G148500 Sobic009G148500 Sobic003G141100--Sobic009G148500 Sobic003G160800 Sobic003G160800 Sobic003G141100--Sobic003G160800 Sobic005G002900 Sobic005G002900 Sobic003G141100--Sobic005G002900 Sobic008G062400--Sobic003G141100 Sobic008G062400--Sobic003G232700 Sobic008G062400--Sobic007G023200 Sobic004G120100 Sobic004G120100 Sobic008G062400--Sobic004G120100 Sobic008G062400--Sobic002G000600 Sobic008G062400--Sobic003G247400 Sobic003G234900 Sobic003G234900 Sobic008G062400--Sobic003G234900 Sobic002G347600 Sobic002G347600 Sobic008G062400--Sobic002G347600 Sobic004G163800 Sobic004G163800 Sobic008G062400--Sobic004G163800 Sobic006G197300--Sobic001G500600 Sobic006G197300--Sobic004G336200 Sobic006G197300--Sobic003G232700 Sobic003G094350 Sobic003G094350 Sobic006G197300--Sobic003G094350 Sobic006G197300--Sobic001G516901 Sobic003G070900 Sobic003G070900 Sobic006G197300--Sobic003G070900 Sobic003G287900 Sobic003G287900 Sobic006G197300--Sobic003G287900 Sobic001G436400 Sobic001G436400 Sobic006G197300--Sobic001G436400 Sobic007G103400 Sobic007G103400 Sobic006G197300--Sobic007G103400 Sobic007G023200--Sobic004G238200 Sobic003G217700 Sobic003G217700 Sobic007G023200--Sobic003G217700 Sobic007G023200--Sobic004G163800 Sobic007G023200--Sobic003G234900 Sobic002G168300 Sobic002G168300 Sobic007G023200--Sobic002G168300 Sobic005G059800 Sobic005G059800 Sobic007G023200--Sobic005G059800 Sobic007G185700 Sobic007G185700 Sobic007G023200--Sobic007G185700 Sobic007G023200--Sobic008G062400 Sobic010G176550 Sobic010G176550 Sobic007G023200--Sobic010G176550 Sobic001G516901--Sobic001G500600 Sobic001G516901--Sobic006G197300 Sobic001G516901--Sobic004G336200 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic001G516901--Sobic003G160800 Sobic004G328400--Sobic003G141100 Sobic004G328400--Sobic003G232700 Sobic004G328400--Sobic003G372900 Sobic004G328400--Sobic001G500600 Sobic004G328400--Sobic004G336200 Sobic004G328400--Sobic001G054100 Sobic004G328400--Sobic003G301300 Sobic003G150800 Sobic003G150800 Sobic004G328400--Sobic003G150800 Sobic004G328400--Sobic003G160800 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic001G500600--Sobic003G070900 Sobic001G500600--Sobic003G141100 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic001G500600--Sobic003G372900
Octagon: transcription factors


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