Gene annotation
Transcriptome id Sobic.005G036100.1
Synonym Sb05g003020
Functional annotation phosphoglycerate mutase, putative, expressed
UniProt C6JSB8 , C5Y4M5
Pfam PF00300
Panther DB PTHR23029 PTHR23029:SF43
NCBI CDD KOG0235; Phosphoglycerate mutase
KEGG Orthology K15634; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22620 : phosphoglycerate/bisphosphoglycerate mutase family protein
RAP-DB (Rice) LOC_Os11g05260.1 : phosphoglycerate mutase, putative, expressed
MaizeGDB (Corn) Zm00025a033476
Brachypodium KQJ91763 , KQJ91762
Barley -
Wheat TraesCS4B02G134600 , TraesCS4A02G184100 , TraesCS4A02G184100 , TraesCS4A02G184100 , TraesCS4D02G129300 , TraesCS4D02G129300
Populus PNT41999


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cDNA sequences
Sobic.005G036100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G186200 thioredoxin, putative, expressed -
2 Sobic.001G337600 expressed protein -
3 Sobic.002G000600 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
4 Sobic.008G062500 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
5 Sobic.009G055800 expressed protein -
6 Sobic.001G102500 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed K03527: ispH, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
7 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
8 Sobic.003G110700 nuclear transport factor, putative, expressed -
9 Sobic.004G248400 APO, putative, expressed -
10 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
11 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
12 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
13 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
15 Sobic.001G098301 - -
16 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
17 Sobic.008G063200 expressed protein -
18 Sobic.003G114100 expressed protein -
19 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
20 Sobic.009G164300 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II


Gene co-expression network
sample Sobic005G036100 Sobic005G036100 Sobic004G186200 Sobic004G186200 Sobic005G036100--Sobic004G186200 Sobic001G337600 Sobic001G337600 Sobic005G036100--Sobic001G337600 Sobic002G000600 Sobic002G000600 Sobic005G036100--Sobic002G000600 Sobic008G062500 Sobic008G062500 Sobic005G036100--Sobic008G062500 Sobic009G055800 Sobic009G055800 Sobic005G036100--Sobic009G055800 Sobic001G102500 Sobic001G102500 Sobic005G036100--Sobic001G102500 Sobic003G137100 Sobic003G137100 Sobic005G036100--Sobic003G137100 Sobic003G110700 Sobic003G110700 Sobic005G036100--Sobic003G110700 Sobic004G248400 Sobic004G248400 Sobic005G036100--Sobic004G248400 Sobic004G186200--Sobic005G036100 Sobic004G186200--Sobic008G062500 Sobic004G186200--Sobic009G055800 Sobic008G116300 Sobic008G116300 Sobic004G186200--Sobic008G116300 Sobic004G186200--Sobic003G110700 Sobic001G069000 Sobic001G069000 Sobic004G186200--Sobic001G069000 Sobic010G096300 Sobic010G096300 Sobic004G186200--Sobic010G096300 Sobic008G066100 Sobic008G066100 Sobic004G186200--Sobic008G066100 Sobic001G035800 Sobic001G035800 Sobic004G186200--Sobic001G035800 Sobic001G099000 Sobic001G099000 Sobic001G337600--Sobic001G099000 Sobic004G255500 Sobic004G255500 Sobic001G337600--Sobic004G255500 Sobic001G337600--Sobic009G055800 Sobic001G337600--Sobic005G036100 Sobic001G122400 Sobic001G122400 Sobic001G337600--Sobic001G122400 Sobic006G107600 Sobic006G107600 Sobic001G337600--Sobic006G107600 Sobic003G386300 Sobic003G386300 Sobic001G337600--Sobic003G386300 Sobic003G162900 Sobic003G162900 Sobic001G337600--Sobic003G162900 Sobic003G077400 Sobic003G077400 Sobic001G337600--Sobic003G077400 Sobic003G232700 Sobic003G232700 Sobic002G000600--Sobic003G232700 Sobic004G178100 Sobic004G178100 Sobic002G000600--Sobic004G178100 Sobic003G141100 Sobic003G141100 Sobic002G000600--Sobic003G141100 Sobic008G062400 Sobic008G062400 Sobic002G000600--Sobic008G062400 Sobic006G197300 Sobic006G197300 Sobic002G000600--Sobic006G197300 Sobic007G023200 Sobic007G023200 Sobic002G000600--Sobic007G023200 Sobic001G516901 Sobic001G516901 Sobic002G000600--Sobic001G516901 Sobic004G328400 Sobic004G328400 Sobic002G000600--Sobic004G328400 Sobic001G500600 Sobic001G500600 Sobic002G000600--Sobic001G500600 Sobic003G412900 Sobic003G412900 Sobic008G062500--Sobic003G412900 Sobic008G062500--Sobic009G055800 Sobic008G062500--Sobic003G077400 Sobic003G160800 Sobic003G160800 Sobic008G062500--Sobic003G160800 Sobic008G062500--Sobic003G110700 Sobic007G085800 Sobic007G085800 Sobic008G062500--Sobic007G085800 Sobic001G168800 Sobic001G168800 Sobic008G062500--Sobic001G168800 Sobic003G439000 Sobic003G439000 Sobic008G062500--Sobic003G439000 Sobic009G164300 Sobic009G164300 Sobic008G062500--Sobic009G164300 Sobic001G469900 Sobic001G469900 Sobic009G055800--Sobic001G469900 Sobic009G055800--Sobic001G035800 Sobic009G055800--Sobic003G077400 Sobic009G055800--Sobic009G164300 Sobic009G055800--Sobic003G439000 Sobic003G254600 Sobic003G254600 Sobic009G055800--Sobic003G254600 Sobic009G055800--Sobic008G062500 Sobic009G055800--Sobic001G168800 Sobic001G469933 Sobic001G469933 Sobic009G055800--Sobic001G469933 Sobic003G067100 Sobic003G067100 Sobic001G102500--Sobic003G067100 Sobic005G014700 Sobic005G014700 Sobic001G102500--Sobic005G014700 Sobic010G255100 Sobic010G255100 Sobic001G102500--Sobic010G255100 Sobic006G186600 Sobic006G186600 Sobic001G102500--Sobic006G186600 Sobic003G170200 Sobic003G170200 Sobic001G102500--Sobic003G170200 Sobic002G168300 Sobic002G168300 Sobic001G102500--Sobic002G168300 Sobic003G434700 Sobic003G434700 Sobic001G102500--Sobic003G434700 Sobic006G210400 Sobic006G210400 Sobic001G102500--Sobic006G210400 Sobic004G238900 Sobic004G238900 Sobic001G102500--Sobic004G238900 Sobic001G536800 Sobic001G536800 Sobic003G137100--Sobic001G536800 Sobic009G085500 Sobic009G085500 Sobic003G137100--Sobic009G085500 Sobic003G137100--Sobic001G069000 Sobic001G495300 Sobic001G495300 Sobic003G137100--Sobic001G495300 Sobic006G010900 Sobic006G010900 Sobic003G137100--Sobic006G010900 Sobic003G137100--Sobic003G412900 Sobic001G233400 Sobic001G233400 Sobic003G137100--Sobic001G233400 Sobic002G000700 Sobic002G000700 Sobic003G137100--Sobic002G000700 Sobic006G103400 Sobic006G103400 Sobic003G137100--Sobic006G103400 Sobic003G305000 Sobic003G305000 Sobic003G110700--Sobic003G305000 Sobic003G110700--Sobic008G062500 Sobic003G110700--Sobic003G137100 Sobic002G114700 Sobic002G114700 Sobic003G110700--Sobic002G114700 Sobic003G110700--Sobic009G055800 Sobic008G183200 Sobic008G183200 Sobic003G110700--Sobic008G183200 Sobic004G001300 Sobic004G001300 Sobic003G110700--Sobic004G001300 Sobic002G104000 Sobic002G104000 Sobic003G110700--Sobic002G104000 Sobic003G110700--Sobic004G186200 Sobic006G214700 Sobic006G214700 Sobic004G248400--Sobic006G214700 Sobic004G333400 Sobic004G333400 Sobic004G248400--Sobic004G333400 Sobic009G052700 Sobic009G052700 Sobic004G248400--Sobic009G052700 Sobic004G248400--Sobic002G168300 Sobic001G450600 Sobic001G450600 Sobic004G248400--Sobic001G450600 Sobic003G334100 Sobic003G334100 Sobic004G248400--Sobic003G334100 Sobic003G179400 Sobic003G179400 Sobic004G248400--Sobic003G179400 Sobic008G063200 Sobic008G063200 Sobic004G248400--Sobic008G063200 Sobic010G110332 Sobic010G110332 Sobic004G248400--Sobic010G110332
Octagon: transcription factors


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