Gene annotation
Transcriptome id Sobic.004G186200.1
Synonym Sb04g023500
Functional annotation thioredoxin, putative, expressed
UniProt A0A1Z5RP02
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF229
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT1G07700 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os02g35900.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a020757
Brachypodium KQJ99976
Barley HORVU2Hr1G124800.1 , HORVU2Hr1G124800.3 , HORVU2Hr1G124800.2 , HORVU2Hr1G124800.4
Wheat TraesCS2A02G575500 , TraesCS2B02G611700 , TraesCS2B02G611700 , TraesCS2D02G586200
Populus -


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cDNA sequences
Sobic.004G186200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G036100 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
2 Sobic.008G062500 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
3 Sobic.009G055800 expressed protein -
4 Sobic.008G116300 expressed protein -
5 Sobic.003G110700 nuclear transport factor, putative, expressed -
6 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
7 Sobic.010G096300 -(PubMedID : 22968911)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
8 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
9 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
10 Sobic.009G085500 hydrolase, alpha/beta fold family protein, putative, expressed -
11 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
12 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G104000 - -
14 Sobic.008G183200 LOL3, putative, expressed -
15 Sobic.001G391900 nifU, putative, expressed -
16 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
17 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
18 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
19 Sobic.006G101500 expressed protein -
20 Sobic.001G314200 expressed protein -


Gene co-expression network
sample Sobic004G186200 Sobic004G186200 Sobic005G036100 Sobic005G036100 Sobic004G186200--Sobic005G036100 Sobic008G062500 Sobic008G062500 Sobic004G186200--Sobic008G062500 Sobic009G055800 Sobic009G055800 Sobic004G186200--Sobic009G055800 Sobic008G116300 Sobic008G116300 Sobic004G186200--Sobic008G116300 Sobic003G110700 Sobic003G110700 Sobic004G186200--Sobic003G110700 Sobic001G069000 Sobic001G069000 Sobic004G186200--Sobic001G069000 Sobic010G096300 Sobic010G096300 Sobic004G186200--Sobic010G096300 Sobic008G066100 Sobic008G066100 Sobic004G186200--Sobic008G066100 Sobic001G035800 Sobic001G035800 Sobic004G186200--Sobic001G035800 Sobic005G036100--Sobic004G186200 Sobic001G337600 Sobic001G337600 Sobic005G036100--Sobic001G337600 Sobic002G000600 Sobic002G000600 Sobic005G036100--Sobic002G000600 Sobic005G036100--Sobic008G062500 Sobic005G036100--Sobic009G055800 Sobic001G102500 Sobic001G102500 Sobic005G036100--Sobic001G102500 Sobic003G137100 Sobic003G137100 Sobic005G036100--Sobic003G137100 Sobic005G036100--Sobic003G110700 Sobic004G248400 Sobic004G248400 Sobic005G036100--Sobic004G248400 Sobic003G412900 Sobic003G412900 Sobic008G062500--Sobic003G412900 Sobic008G062500--Sobic009G055800 Sobic003G077400 Sobic003G077400 Sobic008G062500--Sobic003G077400 Sobic003G160800 Sobic003G160800 Sobic008G062500--Sobic003G160800 Sobic008G062500--Sobic003G110700 Sobic007G085800 Sobic007G085800 Sobic008G062500--Sobic007G085800 Sobic001G168800 Sobic001G168800 Sobic008G062500--Sobic001G168800 Sobic003G439000 Sobic003G439000 Sobic008G062500--Sobic003G439000 Sobic009G164300 Sobic009G164300 Sobic008G062500--Sobic009G164300 Sobic001G469900 Sobic001G469900 Sobic009G055800--Sobic001G469900 Sobic009G055800--Sobic001G035800 Sobic009G055800--Sobic003G077400 Sobic009G055800--Sobic009G164300 Sobic009G055800--Sobic003G439000 Sobic003G254600 Sobic003G254600 Sobic009G055800--Sobic003G254600 Sobic009G055800--Sobic008G062500 Sobic009G055800--Sobic001G168800 Sobic001G469933 Sobic001G469933 Sobic009G055800--Sobic001G469933 Sobic003G387100 Sobic003G387100 Sobic008G116300--Sobic003G387100 Sobic008G116300--Sobic007G085800 Sobic006G101500 Sobic006G101500 Sobic008G116300--Sobic006G101500 Sobic002G036000 Sobic002G036000 Sobic008G116300--Sobic002G036000 Sobic008G116300--Sobic003G412900 Sobic008G116300--Sobic001G069000 Sobic010G214100 Sobic010G214100 Sobic008G116300--Sobic010G214100 Sobic006G010900 Sobic006G010900 Sobic008G116300--Sobic006G010900 Sobic008G116300--Sobic003G077400 Sobic003G305000 Sobic003G305000 Sobic003G110700--Sobic003G305000 Sobic003G110700--Sobic008G062500 Sobic003G110700--Sobic003G137100 Sobic002G114700 Sobic002G114700 Sobic003G110700--Sobic002G114700 Sobic003G110700--Sobic009G055800 Sobic008G183200 Sobic008G183200 Sobic003G110700--Sobic008G183200 Sobic004G001300 Sobic004G001300 Sobic003G110700--Sobic004G001300 Sobic002G104000 Sobic002G104000 Sobic003G110700--Sobic002G104000 Sobic003G110700--Sobic004G186200 Sobic001G069000--Sobic003G412900 Sobic009G125400 Sobic009G125400 Sobic001G069000--Sobic009G125400 Sobic002G098800 Sobic002G098800 Sobic001G069000--Sobic002G098800 Sobic001G069000--Sobic006G010900 Sobic001G536800 Sobic001G536800 Sobic001G069000--Sobic001G536800 Sobic004G308700 Sobic004G308700 Sobic001G069000--Sobic004G308700 Sobic001G069000--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic001G069000--Sobic001G314200 Sobic004G272100 Sobic004G272100 Sobic001G069000--Sobic004G272100 Sobic006G103400 Sobic006G103400 Sobic010G096300--Sobic006G103400 Sobic004G227200 Sobic004G227200 Sobic010G096300--Sobic004G227200 Sobic006G093900 Sobic006G093900 Sobic010G096300--Sobic006G093900 Sobic001G233400 Sobic001G233400 Sobic010G096300--Sobic001G233400 Sobic003G435800 Sobic003G435800 Sobic010G096300--Sobic003G435800 Sobic007G223500 Sobic007G223500 Sobic010G096300--Sobic007G223500 Sobic010G096300--Sobic001G035800 Sobic010G096300--Sobic001G069000 Sobic010G096300--Sobic009G164300 Sobic001G425400 Sobic001G425400 Sobic008G066100--Sobic001G425400 Sobic003G359100 Sobic003G359100 Sobic008G066100--Sobic003G359100 Sobic008G066100--Sobic004G308700 Sobic007G207800 Sobic007G207800 Sobic008G066100--Sobic007G207800 Sobic008G134800 Sobic008G134800 Sobic008G066100--Sobic008G134800 Sobic008G066100--Sobic004G272100 Sobic004G035500 Sobic004G035500 Sobic008G066100--Sobic004G035500 Sobic008G066100--Sobic007G223500 Sobic002G030500 Sobic002G030500 Sobic008G066100--Sobic002G030500 Sobic001G035800--Sobic009G055800 Sobic001G417200 Sobic001G417200 Sobic001G035800--Sobic001G417200 Sobic001G035800--Sobic004G227200 Sobic001G405700 Sobic001G405700 Sobic001G035800--Sobic001G405700 Sobic001G035800--Sobic006G093900 Sobic001G035800--Sobic003G254600 Sobic001G035800--Sobic003G412900 Sobic001G035800--Sobic003G439000 Sobic001G035800--Sobic001G168800
Octagon: transcription factors


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