Gene annotation
Transcriptome id Sobic.002G104000.1
Synonym
Functional annotation -
UniProt A0A1B6QAE0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G104000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G217700 possible lysine decarboxylase domain containing protein, expressed -
2 Sobic.003G110700 nuclear transport factor, putative, expressed -
3 Sobic.004G315800 ZOS2-17 - C2H2 zinc finger protein, expressed -
4 Sobic.003G114100 expressed protein -
5 Sobic.004G186200 thioredoxin, putative, expressed -
6 Sobic.005G036100 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
7 Sobic.008G131700 PsbP, putative, expressed -
8 Sobic.002G215000 chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
9 Sobic.004G183300 expressed protein -
10 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
12 Sobic.006G060200 basic proline-rich protein, putative, expressed -
13 Sobic.001G084600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
14 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
15 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
16 Sobic.010G096300 -(PubMedID : 22968911)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
17 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
18 Sobic.007G179750 - -
19 Sobic.001G102300 homeobox domain containing protein, expressed -
20 Sobic.005G036600 calmodulin-binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G104000 Sobic002G104000 Sobic001G217700 Sobic001G217700 Sobic002G104000--Sobic001G217700 Sobic003G110700 Sobic003G110700 Sobic002G104000--Sobic003G110700 Sobic004G315800 Sobic004G315800 Sobic002G104000--Sobic004G315800 Sobic003G114100 Sobic003G114100 Sobic002G104000--Sobic003G114100 Sobic004G186200 Sobic004G186200 Sobic002G104000--Sobic004G186200 Sobic005G036100 Sobic005G036100 Sobic002G104000--Sobic005G036100 Sobic008G131700 Sobic008G131700 Sobic002G104000--Sobic008G131700 Sobic002G215000 Sobic002G215000 Sobic002G104000--Sobic002G215000 Sobic004G183300 Sobic004G183300 Sobic002G104000--Sobic004G183300 Sobic006G060200 Sobic006G060200 Sobic001G217700--Sobic006G060200 Sobic001G217700--Sobic002G104000 Sobic006G249050 Sobic006G249050 Sobic001G217700--Sobic006G249050 Sobic002G376700 Sobic002G376700 Sobic001G217700--Sobic002G376700 Sobic001G217700--Sobic003G110700 Sobic001G269300 Sobic001G269300 Sobic001G217700--Sobic001G269300 Sobic006G102400 Sobic006G102400 Sobic001G217700--Sobic006G102400 Sobic005G036600 Sobic005G036600 Sobic001G217700--Sobic005G036600 Sobic010G246600 Sobic010G246600 Sobic001G217700--Sobic010G246600 Sobic003G305000 Sobic003G305000 Sobic003G110700--Sobic003G305000 Sobic008G062500 Sobic008G062500 Sobic003G110700--Sobic008G062500 Sobic003G137100 Sobic003G137100 Sobic003G110700--Sobic003G137100 Sobic002G114700 Sobic002G114700 Sobic003G110700--Sobic002G114700 Sobic009G055800 Sobic009G055800 Sobic003G110700--Sobic009G055800 Sobic008G183200 Sobic008G183200 Sobic003G110700--Sobic008G183200 Sobic004G001300 Sobic004G001300 Sobic003G110700--Sobic004G001300 Sobic003G110700--Sobic002G104000 Sobic003G110700--Sobic004G186200 Sobic007G130100 Sobic007G130100 Sobic004G315800--Sobic007G130100 Sobic006G204200 Sobic006G204200 Sobic004G315800--Sobic006G204200 Sobic004G315800--Sobic008G131700 Sobic002G209600 Sobic002G209600 Sobic004G315800--Sobic002G209600 Sobic004G315800--Sobic001G269300 Sobic004G241500 Sobic004G241500 Sobic004G315800--Sobic004G241500 Sobic004G016500 Sobic004G016500 Sobic004G315800--Sobic004G016500 Sobic007G052900 Sobic007G052900 Sobic004G315800--Sobic007G052900 Sobic007G076700 Sobic007G076700 Sobic004G315800--Sobic007G076700 Sobic003G114100--Sobic002G114700 Sobic001G076200 Sobic001G076200 Sobic003G114100--Sobic001G076200 Sobic008G078900 Sobic008G078900 Sobic003G114100--Sobic008G078900 Sobic010G052500 Sobic010G052500 Sobic003G114100--Sobic010G052500 Sobic003G014000 Sobic003G014000 Sobic003G114100--Sobic003G014000 Sobic007G201400 Sobic007G201400 Sobic003G114100--Sobic007G201400 Sobic003G114100--Sobic008G131700 Sobic006G273400 Sobic006G273400 Sobic003G114100--Sobic006G273400 Sobic001G514100 Sobic001G514100 Sobic003G114100--Sobic001G514100 Sobic004G186200--Sobic005G036100 Sobic004G186200--Sobic008G062500 Sobic004G186200--Sobic009G055800 Sobic008G116300 Sobic008G116300 Sobic004G186200--Sobic008G116300 Sobic004G186200--Sobic003G110700 Sobic001G069000 Sobic001G069000 Sobic004G186200--Sobic001G069000 Sobic010G096300 Sobic010G096300 Sobic004G186200--Sobic010G096300 Sobic008G066100 Sobic008G066100 Sobic004G186200--Sobic008G066100 Sobic001G035800 Sobic001G035800 Sobic004G186200--Sobic001G035800 Sobic005G036100--Sobic004G186200 Sobic001G337600 Sobic001G337600 Sobic005G036100--Sobic001G337600 Sobic002G000600 Sobic002G000600 Sobic005G036100--Sobic002G000600 Sobic005G036100--Sobic008G062500 Sobic005G036100--Sobic009G055800 Sobic001G102500 Sobic001G102500 Sobic005G036100--Sobic001G102500 Sobic005G036100--Sobic003G137100 Sobic005G036100--Sobic003G110700 Sobic004G248400 Sobic004G248400 Sobic005G036100--Sobic004G248400 Sobic003G074700 Sobic003G074700 Sobic008G131700--Sobic003G074700 Sobic008G131700--Sobic002G215000 Sobic005G084000 Sobic005G084000 Sobic008G131700--Sobic005G084000 Sobic001G495300 Sobic001G495300 Sobic008G131700--Sobic001G495300 Sobic003G305300 Sobic003G305300 Sobic008G131700--Sobic003G305300 Sobic004G246800 Sobic004G246800 Sobic008G131700--Sobic004G246800 Sobic007G210600 Sobic007G210600 Sobic008G131700--Sobic007G210600 Sobic008G131700--Sobic006G060200 Sobic008G131700--Sobic002G209600 Sobic002G215000--Sobic003G074700 Sobic002G215000--Sobic008G131700 Sobic002G215000--Sobic006G060200 Sobic002G215000--Sobic003G305300 Sobic004G068300 Sobic004G068300 Sobic002G215000--Sobic004G068300 Sobic009G164300 Sobic009G164300 Sobic002G215000--Sobic009G164300 Sobic002G077000 Sobic002G077000 Sobic002G215000--Sobic002G077000 Sobic006G222700 Sobic006G222700 Sobic002G215000--Sobic006G222700 Sobic006G229300 Sobic006G229300 Sobic002G215000--Sobic006G229300 Sobic004G183300--Sobic002G104000 Sobic001G167800 Sobic001G167800 Sobic004G183300--Sobic001G167800 Sobic005G155900 Sobic005G155900 Sobic004G183300--Sobic005G155900 Sobic004G183300--Sobic003G110700 Sobic008G011200 Sobic008G011200 Sobic004G183300--Sobic008G011200 Sobic003G310800 Sobic003G310800 Sobic004G183300--Sobic003G310800 Sobic010G279100 Sobic010G279100 Sobic004G183300--Sobic010G279100 Sobic003G254600 Sobic003G254600 Sobic004G183300--Sobic003G254600 Sobic003G161100 Sobic003G161100 Sobic004G183300--Sobic003G161100
Octagon: transcription factors


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