Gene annotation
Transcriptome id Sobic.001G084600.1
Synonym Sb01g007630
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
UniProt Q8LKT5
Pfam PF00201
Panther DB PTHR11926 PTHR11926:SF316
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G02100 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os03g55030.1 : UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034480 , Zm00025a008212
Brachypodium KQK13112 , KQK13117 , KQK13115 , KQK13114 , KQK13118 , KQK21694
Barley HORVU5Hr1G096240.2 , HORVU5Hr1G096240.1 , HORVU5Hr1G096260.1 , HORVU5Hr1G096260.2 , HORVU5Hr1G096310.3 , HORVU7Hr1G040760.1 , HORVU1Hr1G009200.1 , HORVU5Hr1G096340.3 , HORVU5Hr1G096340.2 , HORVU5Hr1G096360.1 , HORVU5Hr1G096310.1 , HORVU5Hr1G096310.2 , HORVU5Hr1G096360.2 , HORVU5Hr1G096320.1 , HORVU5Hr1G096320.3 , HORVU5Hr1G096320.2 , HORVU5Hr1G096320.4 , HORVU2Hr1G024600.1 , HORVU2Hr1G024600.2 , HORVU2Hr1G024600.3 , HORVU2Hr1G024630.1
Wheat TraesCS7A02G197800 , TraesCS1A02G047700 , TraesCS5D02G403800 , TraesCS5A02G394100 , TraesCS5B02G399200 , TraesCS5B02G398400 , TraesCS5D02G403500 , TraesCS5A02G393900 , TraesCS7B02G104700 , TraesCS5D02G403900 , TraesCS1D02G048800 , TraesCS5D02G403700 , TraesCS1B02G062100 , TraesCS3B02G066600 , TraesCS5B02G398500 , TraesCS5D02G403600 , TraesCS5D02G403600 , TraesCS5D02G404200 , TraesCS5B02G398800 , TraesCS5D02G404100 , TraesCS5A02G394500 , TraesCS5B02G399100 , TraesCS5A02G394200 , TraesCS5B02G398600 , TraesCS5A02G394800 , TraesCS5A02G394800 , TraesCS5B02G398900 , TraesCS2B02G162400 , TraesCS5A02G394000 , TraesCS5A02G394400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G004000 - -
2 Sobic.006G204200 putrescine-binding periplasmic protein-related, putative, expressed -
3 Sobic.004G315800 ZOS2-17 - C2H2 zinc finger protein, expressed -
4 Sobic.002G104000 - -
5 Sobic.006G060200 basic proline-rich protein, putative, expressed -
6 Sobic.001G217700 possible lysine decarboxylase domain containing protein, expressed -
7 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G269300 OsFBD15 - F-box and FBD domain containing protein, expressed -
9 Sobic.010G092100 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
10 Sobic.008G131700 PsbP, putative, expressed -
11 Sobic.003G060400 transcription regulator, putative, expressed -
12 Sobic.008G105900 - -
13 Sobic.001G038500 ANT1, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
14 Sobic.006G180432 - -
15 Sobic.003G001500 expressed protein -
16 Sobic.002G215000 chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
17 Sobic.005G076000 expressed protein -
18 Sobic.009G010700 expressed protein -
19 Sobic.001G433200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@beta-galactosidase precursor, putative, expressed -
20 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase


Gene co-expression network
sample Sobic001G084600 Sobic001G084600 Sobic006G004000 Sobic006G004000 Sobic001G084600--Sobic006G004000 Sobic006G204200 Sobic006G204200 Sobic001G084600--Sobic006G204200 Sobic004G315800 Sobic004G315800 Sobic001G084600--Sobic004G315800 Sobic002G104000 Sobic002G104000 Sobic001G084600--Sobic002G104000 Sobic006G060200 Sobic006G060200 Sobic001G084600--Sobic006G060200 Sobic001G217700 Sobic001G217700 Sobic001G084600--Sobic001G217700 Sobic003G178700 Sobic003G178700 Sobic001G084600--Sobic003G178700 Sobic001G269300 Sobic001G269300 Sobic001G084600--Sobic001G269300 Sobic010G092100 Sobic010G092100 Sobic001G084600--Sobic010G092100 Sobic006G004000--Sobic001G084600 Sobic010G153532 Sobic010G153532 Sobic006G004000--Sobic010G153532 Sobic003G060400 Sobic003G060400 Sobic006G004000--Sobic003G060400 Sobic006G073150 Sobic006G073150 Sobic006G004000--Sobic006G073150 Sobic006G004000--Sobic006G204200 Sobic006G019600 Sobic006G019600 Sobic006G004000--Sobic006G019600 Sobic001G361900 Sobic001G361900 Sobic006G004000--Sobic001G361900 Sobic010G060000 Sobic010G060000 Sobic006G004000--Sobic010G060000 Sobic006G004000--Sobic004G315800 Sobic002G376800 Sobic002G376800 Sobic006G204200--Sobic002G376800 Sobic003G057800 Sobic003G057800 Sobic006G204200--Sobic003G057800 Sobic001G479500 Sobic001G479500 Sobic006G204200--Sobic001G479500 Sobic004G016500 Sobic004G016500 Sobic006G204200--Sobic004G016500 Sobic006G204200--Sobic004G315800 Sobic002G330400 Sobic002G330400 Sobic006G204200--Sobic002G330400 Sobic008G161401 Sobic008G161401 Sobic006G204200--Sobic008G161401 Sobic004G020401 Sobic004G020401 Sobic006G204200--Sobic004G020401 Sobic010G248200 Sobic010G248200 Sobic006G204200--Sobic010G248200 Sobic007G130100 Sobic007G130100 Sobic004G315800--Sobic007G130100 Sobic004G315800--Sobic006G204200 Sobic008G131700 Sobic008G131700 Sobic004G315800--Sobic008G131700 Sobic002G209600 Sobic002G209600 Sobic004G315800--Sobic002G209600 Sobic004G315800--Sobic001G269300 Sobic004G241500 Sobic004G241500 Sobic004G315800--Sobic004G241500 Sobic004G315800--Sobic004G016500 Sobic007G052900 Sobic007G052900 Sobic004G315800--Sobic007G052900 Sobic007G076700 Sobic007G076700 Sobic004G315800--Sobic007G076700 Sobic002G104000--Sobic001G217700 Sobic003G110700 Sobic003G110700 Sobic002G104000--Sobic003G110700 Sobic002G104000--Sobic004G315800 Sobic003G114100 Sobic003G114100 Sobic002G104000--Sobic003G114100 Sobic004G186200 Sobic004G186200 Sobic002G104000--Sobic004G186200 Sobic005G036100 Sobic005G036100 Sobic002G104000--Sobic005G036100 Sobic002G104000--Sobic008G131700 Sobic002G215000 Sobic002G215000 Sobic002G104000--Sobic002G215000 Sobic004G183300 Sobic004G183300 Sobic002G104000--Sobic004G183300 Sobic006G060200--Sobic001G269300 Sobic006G060200--Sobic002G215000 Sobic006G060200--Sobic001G217700 Sobic006G060200--Sobic008G131700 Sobic001G233400 Sobic001G233400 Sobic006G060200--Sobic001G233400 Sobic005G036600 Sobic005G036600 Sobic006G060200--Sobic005G036600 Sobic003G137100 Sobic003G137100 Sobic006G060200--Sobic003G137100 Sobic001G495300 Sobic001G495300 Sobic006G060200--Sobic001G495300 Sobic005G084000 Sobic005G084000 Sobic006G060200--Sobic005G084000 Sobic001G217700--Sobic006G060200 Sobic001G217700--Sobic002G104000 Sobic006G249050 Sobic006G249050 Sobic001G217700--Sobic006G249050 Sobic002G376700 Sobic002G376700 Sobic001G217700--Sobic002G376700 Sobic001G217700--Sobic003G110700 Sobic001G217700--Sobic001G269300 Sobic006G102400 Sobic006G102400 Sobic001G217700--Sobic006G102400 Sobic001G217700--Sobic005G036600 Sobic010G246600 Sobic010G246600 Sobic001G217700--Sobic010G246600 Sobic008G015300 Sobic008G015300 Sobic003G178700--Sobic008G015300 Sobic003G163500 Sobic003G163500 Sobic003G178700--Sobic003G163500 Sobic005G046500 Sobic005G046500 Sobic003G178700--Sobic005G046500 Sobic009G002500 Sobic009G002500 Sobic003G178700--Sobic009G002500 Sobic008G101500 Sobic008G101500 Sobic003G178700--Sobic008G101500 Sobic008G118000 Sobic008G118000 Sobic003G178700--Sobic008G118000 Sobic005G076000 Sobic005G076000 Sobic003G178700--Sobic005G076000 Sobic007G129100 Sobic007G129100 Sobic003G178700--Sobic007G129100 Sobic009G213400 Sobic009G213400 Sobic003G178700--Sobic009G213400 Sobic001G269300--Sobic006G060200 Sobic006G180432 Sobic006G180432 Sobic001G269300--Sobic006G180432 Sobic001G269300--Sobic005G036600 Sobic001G269300--Sobic002G209600 Sobic003G201750 Sobic003G201750 Sobic001G269300--Sobic003G201750 Sobic001G269300--Sobic007G052900 Sobic004G143400 Sobic004G143400 Sobic001G269300--Sobic004G143400 Sobic001G269300--Sobic008G131700 Sobic001G269300--Sobic004G315800 Sobic001G038500 Sobic001G038500 Sobic010G092100--Sobic001G038500 Sobic010G092100--Sobic001G361900 Sobic009G010700 Sobic009G010700 Sobic010G092100--Sobic009G010700 Sobic007G159800 Sobic007G159800 Sobic010G092100--Sobic007G159800 Sobic010G092100--Sobic003G178700 Sobic010G092100--Sobic002G376700 Sobic010G092100--Sobic006G204200 Sobic010G092100--Sobic001G084600 Sobic008G163700 Sobic008G163700 Sobic010G092100--Sobic008G163700
Octagon: transcription factors


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