Gene annotation
Transcriptome id Sobic.006G180432.2,Sobic.006G180432.3,Sobic.006G180432.1
Synonym -
Functional annotation -
UniProt A0A1Z5REJ1 , A0A1Z5REH4
Pfam PF00646 PF03478
Panther DB PTHR11102 PTHR11102:SF99
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G22170 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os03g40370.1 : OsFBDUF15 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -
2 Sobic.001G269300 OsFBD15 - F-box and FBD domain containing protein, expressed -
3 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
4 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
5 Sobic.001G497200 expressed protein -
6 Sobic.001G046600 cycloartenol-C-24-methyltransferase 1, putative, expressed -
7 Sobic.005G187200 expressed protein -
8 Sobic.004G016500 PPR repeat domain containing protein, putative, expressed -
9 Sobic.006G048775 - -
10 Sobic.007G054000 powdery mildew resistance protein PM3b, putative, expressed -
11 Sobic.005G036600 calmodulin-binding protein, putative, expressed -
12 Sobic.002G376900 EF hand family protein, putative -
13 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
14 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.006G196000 expressed protein -
17 Sobic.005G046500 protein kinase family protein, putative, expressed -
18 Sobic.004G020401 - -
19 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase
20 Sobic.002G039600 - -


Gene co-expression network
sample Sobic006G180432 Sobic006G180432 Sobic003G057800 Sobic003G057800 Sobic006G180432--Sobic003G057800 Sobic001G269300 Sobic001G269300 Sobic006G180432--Sobic001G269300 Sobic007G052900 Sobic007G052900 Sobic006G180432--Sobic007G052900 Sobic001G479500 Sobic001G479500 Sobic006G180432--Sobic001G479500 Sobic001G497200 Sobic001G497200 Sobic006G180432--Sobic001G497200 Sobic001G046600 Sobic001G046600 Sobic006G180432--Sobic001G046600 Sobic005G187200 Sobic005G187200 Sobic006G180432--Sobic005G187200 Sobic004G016500 Sobic004G016500 Sobic006G180432--Sobic004G016500 Sobic006G048775 Sobic006G048775 Sobic006G180432--Sobic006G048775 Sobic003G057800--Sobic001G479500 Sobic003G357500 Sobic003G357500 Sobic003G057800--Sobic003G357500 Sobic010G248200 Sobic010G248200 Sobic003G057800--Sobic010G248200 Sobic008G161401 Sobic008G161401 Sobic003G057800--Sobic008G161401 Sobic004G212800 Sobic004G212800 Sobic003G057800--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic003G057800--Sobic005G130200 Sobic007G073400 Sobic007G073400 Sobic003G057800--Sobic007G073400 Sobic003G057800--Sobic004G016500 Sobic003G057800--Sobic001G046600 Sobic006G060200 Sobic006G060200 Sobic001G269300--Sobic006G060200 Sobic001G269300--Sobic006G180432 Sobic005G036600 Sobic005G036600 Sobic001G269300--Sobic005G036600 Sobic002G209600 Sobic002G209600 Sobic001G269300--Sobic002G209600 Sobic003G201750 Sobic003G201750 Sobic001G269300--Sobic003G201750 Sobic001G269300--Sobic007G052900 Sobic004G143400 Sobic004G143400 Sobic001G269300--Sobic004G143400 Sobic008G131700 Sobic008G131700 Sobic001G269300--Sobic008G131700 Sobic004G315800 Sobic004G315800 Sobic001G269300--Sobic004G315800 Sobic010G056200 Sobic010G056200 Sobic007G052900--Sobic010G056200 Sobic004G113800 Sobic004G113800 Sobic007G052900--Sobic004G113800 Sobic007G052900--Sobic002G209600 Sobic010G005600 Sobic010G005600 Sobic007G052900--Sobic010G005600 Sobic004G083700 Sobic004G083700 Sobic007G052900--Sobic004G083700 Sobic007G054000 Sobic007G054000 Sobic007G052900--Sobic007G054000 Sobic010G280100 Sobic010G280100 Sobic007G052900--Sobic010G280100 Sobic007G052900--Sobic006G180432 Sobic009G065100 Sobic009G065100 Sobic007G052900--Sobic009G065100 Sobic001G479500--Sobic003G057800 Sobic001G479500--Sobic005G130200 Sobic001G479500--Sobic010G248200 Sobic001G479500--Sobic008G161401 Sobic009G156000 Sobic009G156000 Sobic001G479500--Sobic009G156000 Sobic001G543900 Sobic001G543900 Sobic001G479500--Sobic001G543900 Sobic001G479500--Sobic005G187200 Sobic002G283300 Sobic002G283300 Sobic001G479500--Sobic002G283300 Sobic001G479500--Sobic004G212800 Sobic005G001800 Sobic005G001800 Sobic001G497200--Sobic005G001800 Sobic010G202000 Sobic010G202000 Sobic001G497200--Sobic010G202000 Sobic001G497200--Sobic006G180432 Sobic001G497200--Sobic007G054000 Sobic001G497200--Sobic007G052900 Sobic006G046000 Sobic006G046000 Sobic001G497200--Sobic006G046000 Sobic001G162300 Sobic001G162300 Sobic001G497200--Sobic001G162300 Sobic001G497200--Sobic010G056200 Sobic001G497200--Sobic006G048775 Sobic001G046600--Sobic004G016500 Sobic001G046600--Sobic004G212800 Sobic004G164600 Sobic004G164600 Sobic001G046600--Sobic004G164600 Sobic001G046600--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic001G046600--Sobic003G424100 Sobic004G112500 Sobic004G112500 Sobic001G046600--Sobic004G112500 Sobic008G167300 Sobic008G167300 Sobic001G046600--Sobic008G167300 Sobic008G157950 Sobic008G157950 Sobic001G046600--Sobic008G157950 Sobic008G176732 Sobic008G176732 Sobic001G046600--Sobic008G176732 Sobic010G263800 Sobic010G263800 Sobic005G187200--Sobic010G263800 Sobic004G271900 Sobic004G271900 Sobic005G187200--Sobic004G271900 Sobic005G187200--Sobic001G479500 Sobic004G256600 Sobic004G256600 Sobic005G187200--Sobic004G256600 Sobic007G205800 Sobic007G205800 Sobic005G187200--Sobic007G205800 Sobic007G011400 Sobic007G011400 Sobic005G187200--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic005G187200--Sobic002G077200 Sobic009G134500 Sobic009G134500 Sobic005G187200--Sobic009G134500 Sobic001G194900 Sobic001G194900 Sobic005G187200--Sobic001G194900 Sobic004G016500--Sobic001G046600 Sobic002G150766 Sobic002G150766 Sobic004G016500--Sobic002G150766 Sobic002G330400 Sobic002G330400 Sobic004G016500--Sobic002G330400 Sobic004G016500--Sobic008G167300 Sobic004G016500--Sobic004G212800 Sobic004G016500--Sobic003G057800 Sobic004G016500--Sobic001G479500 Sobic004G016500--Sobic004G164600 Sobic004G016500--Sobic003G424100 Sobic006G048775--Sobic006G046000 Sobic006G048775--Sobic001G479500 Sobic006G045901 Sobic006G045901 Sobic006G048775--Sobic006G045901 Sobic006G048775--Sobic003G057800 Sobic006G048775--Sobic006G180432 Sobic009G110366 Sobic009G110366 Sobic006G048775--Sobic009G110366 Sobic002G212800 Sobic002G212800 Sobic006G048775--Sobic002G212800 Sobic006G048775--Sobic003G201750 Sobic006G048775--Sobic005G130200
Octagon: transcription factors


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