Gene annotation
Transcriptome id Sobic.003G357600.1
Synonym Sb03g039970, LAC7
Functional annotation laccase precursor protein, putative, expressed
UniProt C5XPU3
Pfam PF00394 PF07731 PF07732
Panther DB PTHR11709 PTHR11709:SF109
NCBI CDD KOG1263; Multicopper oxidases
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT5G05390 : laccase 12
RAP-DB (Rice) LOC_Os01g63190.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a054092 , Zm00025a029611 , Zm00025a044821 , Zm00025a039744 , Zm00025a026840 , Zm00025a002044 , Zm00025a027016 , Zm00025a026839
Brachypodium KQK10592 , KQK10593 , KQJ93028 , PNT73207 , KQK10391 , PNT73208 , PNT73209 , KQJ87547 , PNT73210
Barley HORVU5Hr1G047480.10 , HORVU3Hr1G085520.11 , HORVU3Hr1G085520.10 , HORVU3Hr1G085520.5 , HORVU3Hr1G085520.4 , HORVU3Hr1G085520.7 , HORVU3Hr1G085520.6 , HORVU3Hr1G085520.1 , HORVU3Hr1G085520.3 , HORVU3Hr1G085520.2 , HORVU3Hr1G085520.9 , HORVU3Hr1G085520.8 , HORVU5Hr1G047480.6 , HORVU5Hr1G047480.7 , HORVU5Hr1G047480.3 , HORVU5Hr1G047480.9
Wheat TraesCS5D02G156500 , TraesCS3D02G358600 , TraesCS3B02G397300 , TraesCS3A02G365500 , TraesCS3D02G358500 , TraesCS3D02G358500 , TraesCS5A02G151400 , TraesCS3B02G397200 , TraesCS3B02G397200 , TraesCS3A02G365300 , TraesCS3A02G365300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -
3 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
4 Sobic.010G248200 KID-containing protein, putative, expressed -
5 Sobic.004G020401 - -
6 Sobic.002G150766 - -
7 Sobic.004G143700 protein phosphatase 2C, putative, expressed -
8 Sobic.007G023700 MA3 domain containing protein, expressed -
9 Sobic.001G272000 - -
10 Sobic.008G161401 - -
11 Sobic.009G110366 - -
12 Sobic.001G479500 dihydroflavonol-4-reductase, putative, expressed K15891: NAD+-dependent farnesol dehydrogenase
13 Sobic.004G212800 - -
14 Sobic.009G257300 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
15 Sobic.005G130200 - -
16 Sobic.002G283300 protein kinase family protein, putative, expressed -
17 Sobic.002G039500 expressed protein -
18 Sobic.001G433200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@beta-galactosidase precursor, putative, expressed -
19 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
20 Sobic.001G024200 lipase class 3 family protein, putative, expressed -


Gene co-expression network
sample Sobic003G357600 Sobic003G357600 Sobic003G357500 Sobic003G357500 Sobic003G357600--Sobic003G357500 Sobic003G057800 Sobic003G057800 Sobic003G357600--Sobic003G057800 Sobic007G073400 Sobic007G073400 Sobic003G357600--Sobic007G073400 Sobic010G248200 Sobic010G248200 Sobic003G357600--Sobic010G248200 Sobic004G020401 Sobic004G020401 Sobic003G357600--Sobic004G020401 Sobic002G150766 Sobic002G150766 Sobic003G357600--Sobic002G150766 Sobic004G143700 Sobic004G143700 Sobic003G357600--Sobic004G143700 Sobic007G023700 Sobic007G023700 Sobic003G357600--Sobic007G023700 Sobic001G272000 Sobic001G272000 Sobic003G357600--Sobic001G272000 Sobic003G357500--Sobic003G357600 Sobic003G357500--Sobic003G057800 Sobic008G161401 Sobic008G161401 Sobic003G357500--Sobic008G161401 Sobic003G357500--Sobic007G073400 Sobic003G357500--Sobic010G248200 Sobic004G212800 Sobic004G212800 Sobic003G357500--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic003G357500--Sobic005G130200 Sobic006G196000 Sobic006G196000 Sobic003G357500--Sobic006G196000 Sobic001G479500 Sobic001G479500 Sobic003G357500--Sobic001G479500 Sobic003G057800--Sobic001G479500 Sobic003G057800--Sobic003G357500 Sobic003G057800--Sobic010G248200 Sobic003G057800--Sobic008G161401 Sobic003G057800--Sobic004G212800 Sobic003G057800--Sobic005G130200 Sobic003G057800--Sobic007G073400 Sobic004G016500 Sobic004G016500 Sobic003G057800--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G057800--Sobic001G046600 Sobic007G073400--Sobic004G212800 Sobic004G164600 Sobic004G164600 Sobic007G073400--Sobic004G164600 Sobic004G076732 Sobic004G076732 Sobic007G073400--Sobic004G076732 Sobic008G009500 Sobic008G009500 Sobic007G073400--Sobic008G009500 Sobic009G113600 Sobic009G113600 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic008G042250 Sobic008G042250 Sobic007G073400--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic007G073400--Sobic005G110430 Sobic007G073400--Sobic004G143700 Sobic002G007250 Sobic002G007250 Sobic010G248200--Sobic002G007250 Sobic001G345333 Sobic001G345333 Sobic010G248200--Sobic001G345333 Sobic010G248200--Sobic004G212800 Sobic010G248200--Sobic005G130200 Sobic002G253500 Sobic002G253500 Sobic010G248200--Sobic002G253500 Sobic010G248200--Sobic008G161401 Sobic002G108800 Sobic002G108800 Sobic010G248200--Sobic002G108800 Sobic001G243901 Sobic001G243901 Sobic010G248200--Sobic001G243901 Sobic010G218500 Sobic010G218500 Sobic010G248200--Sobic010G218500 Sobic004G291800 Sobic004G291800 Sobic004G020401--Sobic004G291800 Sobic009G110366 Sobic009G110366 Sobic004G020401--Sobic009G110366 Sobic009G109450 Sobic009G109450 Sobic004G020401--Sobic009G109450 Sobic009G197200 Sobic009G197200 Sobic004G020401--Sobic009G197200 Sobic004G020401--Sobic003G057800 Sobic007G130100 Sobic007G130100 Sobic004G020401--Sobic007G130100 Sobic004G020401--Sobic001G479500 Sobic004G020401--Sobic003G357500 Sobic004G020401--Sobic008G161401 Sobic002G150766--Sobic004G016500 Sobic002G150766--Sobic001G046600 Sobic010G146700 Sobic010G146700 Sobic002G150766--Sobic010G146700 Sobic001G024200 Sobic001G024200 Sobic002G150766--Sobic001G024200 Sobic004G118700 Sobic004G118700 Sobic002G150766--Sobic004G118700 Sobic002G150766--Sobic003G357600 Sobic002G150766--Sobic001G479500 Sobic009G214600 Sobic009G214600 Sobic002G150766--Sobic009G214600 Sobic002G150766--Sobic003G057800 Sobic004G143700--Sobic007G073400 Sobic004G143700--Sobic007G023700 Sobic004G143700--Sobic004G212800 Sobic002G283300 Sobic002G283300 Sobic004G143700--Sobic002G283300 Sobic004G143700--Sobic010G248200 Sobic004G143700--Sobic001G024200 Sobic003G093600 Sobic003G093600 Sobic004G143700--Sobic003G093600 Sobic001G439500 Sobic001G439500 Sobic004G143700--Sobic001G439500 Sobic001G543900 Sobic001G543900 Sobic004G143700--Sobic001G543900 Sobic007G023700--Sobic003G093600 Sobic002G039500 Sobic002G039500 Sobic007G023700--Sobic002G039500 Sobic009G180200 Sobic009G180200 Sobic007G023700--Sobic009G180200 Sobic007G023700--Sobic004G143700 Sobic007G023700--Sobic002G108800 Sobic002G221900 Sobic002G221900 Sobic007G023700--Sobic002G221900 Sobic007G156500 Sobic007G156500 Sobic007G023700--Sobic007G156500 Sobic001G347600 Sobic001G347600 Sobic007G023700--Sobic001G347600 Sobic006G184300 Sobic006G184300 Sobic007G023700--Sobic006G184300 Sobic001G271900 Sobic001G271900 Sobic001G272000--Sobic001G271900 SobicK009900 SobicK009900 Sobic001G272000--SobicK009900 Sobic001G287301 Sobic001G287301 Sobic001G272000--Sobic001G287301 Sobic001G272000--Sobic001G024200 Sobic008G049701 Sobic008G049701 Sobic001G272000--Sobic008G049701 Sobic001G272000--Sobic001G543900 Sobic001G272000--Sobic008G042250 Sobic007G211000 Sobic007G211000 Sobic001G272000--Sobic007G211000 Sobic001G272000--Sobic005G110430
Octagon: transcription factors


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