Gene annotation
Transcriptome id Sobic.001G433200.1
Synonym Sb01g040750, BGAL8
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
beta-galactosidase precursor, putative, expressed
UniProt C5WQU7
Pfam PF02140 PF01301
Panther DB PTHR23421 PTHR23421:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G28470 : beta-galactosidase 8
RAP-DB (Rice) LOC_Os03g15020.1 : beta-galactosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051144 , Zm00025a001634
Brachypodium KQK22517
Barley HORVU0Hr1G008780.6 , HORVU0Hr1G008780.1 , HORVU0Hr1G008780.3 , HORVU0Hr1G008780.2 , HORVU6Hr1G039490.18 , HORVU6Hr1G039490.17 , HORVU6Hr1G039490.14 , HORVU6Hr1G039490.13 , HORVU0Hr1G008780.11 , HORVU0Hr1G008780.10 , HORVU0Hr1G008780.12 , HORVU7Hr1G086690.6 , HORVU7Hr1G086690.7 , HORVU7Hr1G086690.4 , HORVU7Hr1G086690.5 , HORVU7Hr1G086690.2 , HORVU7Hr1G086690.3 , HORVU7Hr1G086690.8 , HORVU7Hr1G086690.9 , HORVU6Hr1G039490.7 , HORVU6Hr1G039490.6 , HORVU6Hr1G039490.5 , HORVU6Hr1G039490.4 , HORVU6Hr1G039490.3 , HORVU6Hr1G039490.2 , HORVU6Hr1G039490.1 , HORVU6Hr1G039490.9 , HORVU6Hr1G039490.8 , HORVU3Hr1G050450.14 , HORVU3Hr1G050450.13 , HORVU3Hr1G050450.12 , HORVU3Hr1G050450.11 , HORVU3Hr1G050450.10 , HORVU3Hr1G050450.9 , HORVU3Hr1G050450.8 , HORVU3Hr1G050450.7 , HORVU3Hr1G050450.6 , HORVU3Hr1G050450.5 , HORVU3Hr1G050450.4 , HORVU3Hr1G050450.3 , HORVU3Hr1G050450.2 , HORVU3Hr1G050450.1 , HORVU0Hr1G008780.9 , HORVU0Hr1G008780.8 , HORVU0Hr1G008780.4 , HORVU0Hr1G008780.7 , HORVU7Hr1G086690.14 , HORVU7Hr1G086690.10 , HORVU7Hr1G086690.11 , HORVU7Hr1G086690.12 , HORVU7Hr1G086690.13 , HORVU0Hr1G008780.5
Wheat TraesCS7B02G264200 , TraesCS6A02G185400 , TraesCS6B02G214100 , TraesCS6B02G214100 , TraesCS4A02G083700 , TraesCS4A02G083700 , TraesCS4A02G083700 , TraesCS6D02G172400 , TraesCS4B02G220500 , TraesCS4B02G220500 , TraesCS7D02G359500 , TraesCS7A02G363600 , TraesCS4D02G220800 , TraesCS4D02G220800 , TraesCS4D02G220800
Populus -


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cDNA sequences
Sobic.001G433200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
5 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -
7 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
8 Sobic.008G105500 ureide permease, putative, expressed -
9 Sobic.009G180200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
10 Sobic.001G497200 expressed protein -
11 Sobic.006G180432 - -
12 Sobic.004G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
13 Sobic.004G199600 DUF581 domain containing protein, expressed -
14 Sobic.009G109450 - -
15 Sobic.007G129100 - -
16 Sobic.006G196000 expressed protein -
17 Sobic.002G051300 flavin-containing monooxygenase family protein, putative, expressed -
18 Sobic.002G420300 RNA-binding zinc finger protein, putative, expressed -
19 Sobic.003G006800 expressed protein -
20 Sobic.005G130200 - -


Gene co-expression network
sample Sobic001G433200 Sobic001G433200 Sobic003G357600 Sobic003G357600 Sobic001G433200--Sobic003G357600 Sobic003G357500 Sobic003G357500 Sobic001G433200--Sobic003G357500 Sobic009G078500 Sobic009G078500 Sobic001G433200--Sobic009G078500 Sobic005G130100 Sobic005G130100 Sobic001G433200--Sobic005G130100 Sobic003G178700 Sobic003G178700 Sobic001G433200--Sobic003G178700 Sobic003G057800 Sobic003G057800 Sobic001G433200--Sobic003G057800 Sobic004G221900 Sobic004G221900 Sobic001G433200--Sobic004G221900 Sobic008G105500 Sobic008G105500 Sobic001G433200--Sobic008G105500 Sobic009G180200 Sobic009G180200 Sobic001G433200--Sobic009G180200 Sobic003G357600--Sobic003G357500 Sobic003G357600--Sobic003G057800 Sobic007G073400 Sobic007G073400 Sobic003G357600--Sobic007G073400 Sobic010G248200 Sobic010G248200 Sobic003G357600--Sobic010G248200 Sobic004G020401 Sobic004G020401 Sobic003G357600--Sobic004G020401 Sobic002G150766 Sobic002G150766 Sobic003G357600--Sobic002G150766 Sobic004G143700 Sobic004G143700 Sobic003G357600--Sobic004G143700 Sobic007G023700 Sobic007G023700 Sobic003G357600--Sobic007G023700 Sobic001G272000 Sobic001G272000 Sobic003G357600--Sobic001G272000 Sobic003G357500--Sobic003G357600 Sobic003G357500--Sobic003G057800 Sobic008G161401 Sobic008G161401 Sobic003G357500--Sobic008G161401 Sobic003G357500--Sobic007G073400 Sobic003G357500--Sobic010G248200 Sobic004G212800 Sobic004G212800 Sobic003G357500--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic003G357500--Sobic005G130200 Sobic006G196000 Sobic006G196000 Sobic003G357500--Sobic006G196000 Sobic001G479500 Sobic001G479500 Sobic003G357500--Sobic001G479500 Sobic004G199600 Sobic004G199600 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G109450 Sobic009G109450 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G231300 Sobic009G231300 Sobic009G078500--Sobic009G231300 Sobic010G146200 Sobic010G146200 Sobic009G078500--Sobic010G146200 Sobic001G363100 Sobic001G363100 Sobic009G078500--Sobic001G363100 Sobic009G064766 Sobic009G064766 Sobic009G078500--Sobic009G064766 Sobic003G176100 Sobic003G176100 Sobic009G078500--Sobic003G176100 Sobic005G130100--Sobic009G078500 Sobic005G130100--Sobic009G231300 Sobic005G130100--Sobic010G146200 Sobic005G130100--Sobic004G199600 Sobic005G130100--Sobic009G109450 Sobic005G130100--Sobic009G180200 Sobic010G050600 Sobic010G050600 Sobic005G130100--Sobic010G050600 Sobic005G003200 Sobic005G003200 Sobic005G130100--Sobic005G003200 Sobic006G249000 Sobic006G249000 Sobic005G130100--Sobic006G249000 Sobic008G015300 Sobic008G015300 Sobic003G178700--Sobic008G015300 Sobic003G163500 Sobic003G163500 Sobic003G178700--Sobic003G163500 Sobic005G046500 Sobic005G046500 Sobic003G178700--Sobic005G046500 Sobic009G002500 Sobic009G002500 Sobic003G178700--Sobic009G002500 Sobic008G101500 Sobic008G101500 Sobic003G178700--Sobic008G101500 Sobic008G118000 Sobic008G118000 Sobic003G178700--Sobic008G118000 Sobic005G076000 Sobic005G076000 Sobic003G178700--Sobic005G076000 Sobic007G129100 Sobic007G129100 Sobic003G178700--Sobic007G129100 Sobic009G213400 Sobic009G213400 Sobic003G178700--Sobic009G213400 Sobic003G057800--Sobic001G479500 Sobic003G057800--Sobic003G357500 Sobic003G057800--Sobic010G248200 Sobic003G057800--Sobic008G161401 Sobic003G057800--Sobic004G212800 Sobic003G057800--Sobic005G130200 Sobic003G057800--Sobic007G073400 Sobic004G016500 Sobic004G016500 Sobic003G057800--Sobic004G016500 Sobic001G046600 Sobic001G046600 Sobic003G057800--Sobic001G046600 Sobic004G221900--Sobic007G023700 Sobic004G221900--Sobic001G363100 Sobic004G221900--Sobic009G180200 Sobic007G156500 Sobic007G156500 Sobic004G221900--Sobic007G156500 Sobic003G296600 Sobic003G296600 Sobic004G221900--Sobic003G296600 Sobic002G108800 Sobic002G108800 Sobic004G221900--Sobic002G108800 Sobic006G184300 Sobic006G184300 Sobic004G221900--Sobic006G184300 Sobic001G032100 Sobic001G032100 Sobic004G221900--Sobic001G032100 Sobic002G039500 Sobic002G039500 Sobic004G221900--Sobic002G039500 Sobic008G105500--Sobic003G357500 Sobic008G105500--Sobic009G002500 Sobic006G020500 Sobic006G020500 Sobic008G105500--Sobic006G020500 Sobic002G285200 Sobic002G285200 Sobic008G105500--Sobic002G285200 Sobic008G105500--Sobic009G078500 Sobic008G105500--Sobic009G231300 Sobic004G076732 Sobic004G076732 Sobic008G105500--Sobic004G076732 Sobic008G105500--Sobic007G073400 Sobic008G105500--Sobic004G212800 Sobic009G180200--Sobic004G199600 Sobic009G180200--Sobic001G363100 Sobic009G180200--Sobic009G109450 Sobic009G180200--Sobic009G078500 Sobic009G180200--Sobic007G023700 Sobic009G180200--Sobic009G231300 Sobic009G180200--Sobic005G130100 Sobic003G258400 Sobic003G258400 Sobic009G180200--Sobic003G258400 Sobic005G121800 Sobic005G121800 Sobic009G180200--Sobic005G121800
Octagon: transcription factors


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