Gene annotation
Transcriptome id Sobic.008G105500.2,Sobic.008G105500.3
Synonym UPS2, Sb08g016060, ATUPS2
Functional annotation ureide permease, putative, expressed
UniProt A0A1Z5R5Z8 , C5YNZ3
Pfam PF07168
Panther DB PTHR31081 PTHR31081:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03530 : ureide permease 2
RAP-DB (Rice) LOC_Os12g31860.1,LOC_Os12g31860.3 : ureide permease, putative, expressed
MaizeGDB (Corn) Zm00025a040406 , Zm00025a054179 , Zm00025a025589
Brachypodium KQJ86627
Barley HORVU7Hr1G108790.2 , HORVU7Hr1G108790.1
Wheat TraesCS7D02G466900 , TraesCS7D02G466800
Populus -


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cDNA sequences
Sobic.008G105500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
2 Sobic.009G002500 polygalacturonase inhibitor precursor, putative, expressed -
3 Sobic.006G020500 3-ketoacyl-CoA synthase 6, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
5 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.009G231300 drought induced 19 protein, putative, expressed -
7 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
8 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
9 Sobic.004G212800 - -
10 Sobic.009G109450 - -
11 Sobic.008G161401 - -
12 Sobic.008G009500 pentatricopeptide, putative, expressed -
13 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase
14 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
16 Sobic.007G156500 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
17 Sobic.002G039500 expressed protein -
18 Sobic.002G297800 growth regulating factor protein, putative, expressed -
19 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
20 Sobic.002G376800 EF hand family protein, putative -


Gene co-expression network
sample Sobic008G105500 Sobic008G105500 Sobic003G357500 Sobic003G357500 Sobic008G105500--Sobic003G357500 Sobic009G002500 Sobic009G002500 Sobic008G105500--Sobic009G002500 Sobic006G020500 Sobic006G020500 Sobic008G105500--Sobic006G020500 Sobic002G285200 Sobic002G285200 Sobic008G105500--Sobic002G285200 Sobic009G078500 Sobic009G078500 Sobic008G105500--Sobic009G078500 Sobic009G231300 Sobic009G231300 Sobic008G105500--Sobic009G231300 Sobic004G076732 Sobic004G076732 Sobic008G105500--Sobic004G076732 Sobic007G073400 Sobic007G073400 Sobic008G105500--Sobic007G073400 Sobic004G212800 Sobic004G212800 Sobic008G105500--Sobic004G212800 Sobic003G357600 Sobic003G357600 Sobic003G357500--Sobic003G357600 Sobic003G057800 Sobic003G057800 Sobic003G357500--Sobic003G057800 Sobic008G161401 Sobic008G161401 Sobic003G357500--Sobic008G161401 Sobic003G357500--Sobic007G073400 Sobic010G248200 Sobic010G248200 Sobic003G357500--Sobic010G248200 Sobic003G357500--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic003G357500--Sobic005G130200 Sobic006G196000 Sobic006G196000 Sobic003G357500--Sobic006G196000 Sobic001G479500 Sobic001G479500 Sobic003G357500--Sobic001G479500 Sobic009G002500--Sobic008G105500 Sobic004G020401 Sobic004G020401 Sobic009G002500--Sobic004G020401 Sobic009G109450 Sobic009G109450 Sobic009G002500--Sobic009G109450 Sobic009G002500--Sobic003G357500 Sobic009G197200 Sobic009G197200 Sobic009G002500--Sobic009G197200 Sobic009G002500--Sobic006G196000 Sobic009G002500--Sobic009G078500 Sobic009G002500--Sobic006G020500 Sobic009G110366 Sobic009G110366 Sobic009G002500--Sobic009G110366 Sobic007G094600 Sobic007G094600 Sobic006G020500--Sobic007G094600 Sobic006G020600 Sobic006G020600 Sobic006G020500--Sobic006G020600 Sobic002G314600 Sobic002G314600 Sobic006G020500--Sobic002G314600 Sobic002G051400 Sobic002G051400 Sobic006G020500--Sobic002G051400 Sobic010G091700 Sobic010G091700 Sobic006G020500--Sobic010G091700 Sobic006G020500--Sobic008G105500 Sobic006G020500--Sobic009G109450 Sobic006G020500--Sobic009G231300 Sobic006G020500--Sobic009G078500 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic007G115000 Sobic007G115000 Sobic002G285200--Sobic007G115000 Sobic002G285200--Sobic004G212800 SobicK009900 SobicK009900 Sobic002G285200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G285200--Sobic001G253100 Sobic004G164600 Sobic004G164600 Sobic002G285200--Sobic004G164600 Sobic002G285200--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic002G285200--Sobic003G424100 Sobic004G199600 Sobic004G199600 Sobic009G078500--Sobic004G199600 Sobic005G130100 Sobic005G130100 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G180200 Sobic009G180200 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic010G146200 Sobic010G146200 Sobic009G078500--Sobic010G146200 Sobic001G363100 Sobic001G363100 Sobic009G078500--Sobic001G363100 Sobic009G064766 Sobic009G064766 Sobic009G078500--Sobic009G064766 Sobic003G176100 Sobic003G176100 Sobic009G078500--Sobic003G176100 Sobic009G231300--Sobic005G130100 Sobic009G231300--Sobic009G180200 Sobic009G231300--Sobic009G109450 Sobic009G231300--Sobic009G078500 Sobic007G156500 Sobic007G156500 Sobic009G231300--Sobic007G156500 Sobic005G003200 Sobic005G003200 Sobic009G231300--Sobic005G003200 Sobic003G258400 Sobic003G258400 Sobic009G231300--Sobic003G258400 Sobic009G231300--Sobic004G199600 Sobic010G050600 Sobic010G050600 Sobic009G231300--Sobic010G050600 Sobic004G076732--SobicK009900 Sobic004G076732--Sobic002G410200 Sobic004G076732--Sobic001G253100 Sobic008G009500 Sobic008G009500 Sobic004G076732--Sobic008G009500 Sobic004G076732--Sobic007G073400 Sobic009G209800 Sobic009G209800 Sobic004G076732--Sobic009G209800 Sobic008G042250 Sobic008G042250 Sobic004G076732--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic004G076732--Sobic005G110430 Sobic004G076732--Sobic004G212800 Sobic007G073400--Sobic004G212800 Sobic007G073400--Sobic004G164600 Sobic007G073400--Sobic004G076732 Sobic007G073400--Sobic008G009500 Sobic009G113600 Sobic009G113600 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic007G073400--Sobic008G042250 Sobic007G073400--Sobic005G110430 Sobic004G143700 Sobic004G143700 Sobic007G073400--Sobic004G143700 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic001G024200 Sobic001G024200 Sobic004G212800--Sobic001G024200 Sobic001G345333 Sobic001G345333 Sobic004G212800--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G212800--Sobic002G007250 Sobic004G212800--Sobic010G248200 Sobic004G212800--Sobic004G076732 Sobic004G212800--Sobic008G161401 Sobic004G112500 Sobic004G112500 Sobic004G212800--Sobic004G112500
Octagon: transcription factors


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