Gene annotation
Transcriptome id Sobic.009G002500.1
Synonym PGIP1, Sb09g000440, ATPGIP1
Functional annotation polygalacturonase inhibitor precursor, putative, expressed
UniProt C5YXZ3
Pfam PF08263
Panther DB PTHR27000 PTHR27000:SF37
NCBI CDD KOG4579; Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06860 : polygalacturonase inhibiting protein 1
RAP-DB (Rice) LOC_Os05g01430.1 : polygalacturonase inhibitor 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a041002
Brachypodium KQK07443
Barley HORVU3Hr1G098730.1 , HORVU3Hr1G098730.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G105500 ureide permease, putative, expressed -
2 Sobic.004G020401 - -
3 Sobic.009G109450 - -
4 Sobic.003G357500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.009G197200 - -
6 Sobic.006G196000 expressed protein -
7 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.006G020500 3-ketoacyl-CoA synthase 6, putative, expressed K15397: 3-ketoacyl-CoA synthase
9 Sobic.009G110366 - -
10 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.007G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
12 Sobic.005G046500 protein kinase family protein, putative, expressed -
13 Sobic.002G051450 - -
14 Sobic.003G357600 laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.003G057800 rho termination factor, N-terminal domain containing protein, expressed -
17 Sobic.002G376900 EF hand family protein, putative -
18 Sobic.003G422000 "Glucan endo-1,3-beta-d-glucosidase"(PubMedID : 24906815)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
19 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
20 Sobic.004G199600 DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic009G002500 Sobic009G002500 Sobic008G105500 Sobic008G105500 Sobic009G002500--Sobic008G105500 Sobic004G020401 Sobic004G020401 Sobic009G002500--Sobic004G020401 Sobic009G109450 Sobic009G109450 Sobic009G002500--Sobic009G109450 Sobic003G357500 Sobic003G357500 Sobic009G002500--Sobic003G357500 Sobic009G197200 Sobic009G197200 Sobic009G002500--Sobic009G197200 Sobic006G196000 Sobic006G196000 Sobic009G002500--Sobic006G196000 Sobic009G078500 Sobic009G078500 Sobic009G002500--Sobic009G078500 Sobic006G020500 Sobic006G020500 Sobic009G002500--Sobic006G020500 Sobic009G110366 Sobic009G110366 Sobic009G002500--Sobic009G110366 Sobic008G105500--Sobic003G357500 Sobic008G105500--Sobic009G002500 Sobic008G105500--Sobic006G020500 Sobic002G285200 Sobic002G285200 Sobic008G105500--Sobic002G285200 Sobic008G105500--Sobic009G078500 Sobic009G231300 Sobic009G231300 Sobic008G105500--Sobic009G231300 Sobic004G076732 Sobic004G076732 Sobic008G105500--Sobic004G076732 Sobic007G073400 Sobic007G073400 Sobic008G105500--Sobic007G073400 Sobic004G212800 Sobic004G212800 Sobic008G105500--Sobic004G212800 Sobic004G291800 Sobic004G291800 Sobic004G020401--Sobic004G291800 Sobic004G020401--Sobic009G110366 Sobic004G020401--Sobic009G109450 Sobic004G020401--Sobic009G197200 Sobic003G057800 Sobic003G057800 Sobic004G020401--Sobic003G057800 Sobic007G130100 Sobic007G130100 Sobic004G020401--Sobic007G130100 Sobic001G479500 Sobic001G479500 Sobic004G020401--Sobic001G479500 Sobic004G020401--Sobic003G357500 Sobic008G161401 Sobic008G161401 Sobic004G020401--Sobic008G161401 Sobic009G109450--Sobic009G078500 Sobic004G199600 Sobic004G199600 Sobic009G109450--Sobic004G199600 Sobic009G180200 Sobic009G180200 Sobic009G109450--Sobic009G180200 Sobic005G130100 Sobic005G130100 Sobic009G109450--Sobic005G130100 Sobic009G109450--Sobic009G231300 Sobic009G109450--Sobic006G196000 Sobic005G121800 Sobic005G121800 Sobic009G109450--Sobic005G121800 Sobic002G376900 Sobic002G376900 Sobic009G109450--Sobic002G376900 Sobic009G109450--Sobic009G110366 Sobic003G357600 Sobic003G357600 Sobic003G357500--Sobic003G357600 Sobic003G357500--Sobic003G057800 Sobic003G357500--Sobic008G161401 Sobic003G357500--Sobic007G073400 Sobic010G248200 Sobic010G248200 Sobic003G357500--Sobic010G248200 Sobic003G357500--Sobic004G212800 Sobic005G130200 Sobic005G130200 Sobic003G357500--Sobic005G130200 Sobic003G357500--Sobic006G196000 Sobic003G357500--Sobic001G479500 Sobic009G197200--Sobic004G291800 Sobic009G197200--Sobic004G020401 Sobic009G197200--Sobic009G110366 Sobic009G197200--Sobic009G109450 Sobic008G068400 Sobic008G068400 Sobic009G197200--Sobic008G068400 Sobic006G273100 Sobic006G273100 Sobic009G197200--Sobic006G273100 Sobic008G091671 Sobic008G091671 Sobic009G197200--Sobic008G091671 Sobic010G144100 Sobic010G144100 Sobic009G197200--Sobic010G144100 Sobic002G212800 Sobic002G212800 Sobic009G197200--Sobic002G212800 Sobic006G196000--Sobic009G109450 Sobic006G196000--Sobic009G110366 Sobic006G196000--Sobic005G130100 Sobic006G196000--Sobic009G078500 Sobic006G196000--Sobic003G357500 Sobic006G196000--Sobic001G479500 Sobic006G196000--Sobic009G231300 Sobic006G196000--Sobic009G180200 Sobic009G198900 Sobic009G198900 Sobic006G196000--Sobic009G198900 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic010G146200 Sobic010G146200 Sobic009G078500--Sobic010G146200 Sobic001G363100 Sobic001G363100 Sobic009G078500--Sobic001G363100 Sobic009G064766 Sobic009G064766 Sobic009G078500--Sobic009G064766 Sobic003G176100 Sobic003G176100 Sobic009G078500--Sobic003G176100 Sobic007G094600 Sobic007G094600 Sobic006G020500--Sobic007G094600 Sobic006G020600 Sobic006G020600 Sobic006G020500--Sobic006G020600 Sobic002G314600 Sobic002G314600 Sobic006G020500--Sobic002G314600 Sobic002G051400 Sobic002G051400 Sobic006G020500--Sobic002G051400 Sobic010G091700 Sobic010G091700 Sobic006G020500--Sobic010G091700 Sobic006G020500--Sobic008G105500 Sobic006G020500--Sobic009G109450 Sobic006G020500--Sobic009G231300 Sobic006G020500--Sobic009G078500 Sobic009G110366--Sobic007G073400 Sobic009G110366--Sobic004G020401 Sobic009G110366--Sobic009G109450 Sobic003G258400 Sobic003G258400 Sobic009G110366--Sobic003G258400 Sobic009G110366--Sobic006G196000 Sobic004G143700 Sobic004G143700 Sobic009G110366--Sobic004G143700 Sobic009G110366--Sobic004G291800 Sobic009G110366--Sobic009G180200 Sobic009G110366--Sobic009G198900
Octagon: transcription factors


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