Gene annotation
Transcriptome id Sobic.006G020500.1
Synonym G2, POP1, CUT1, CER6, KCS6, Sb06g001920
Functional annotation 3-ketoacyl-CoA synthase 6, putative, expressed
UniProt C5YCC2
Pfam PF02797
Panther DB PTHR31561 PTHR31561:SF22
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G68530 : 3-ketoacyl-CoA synthase 6
RAP-DB (Rice) LOC_Os04g02640.1 : 3-ketoacyl-CoA synthase 6, putative, expressed
MaizeGDB (Corn) Zm00025a028878
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
2 Sobic.006G020600 3-ketoacyl-CoA synthase 6, putative, expressed -
3 Sobic.002G314600 expressed protein -
4 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
5 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.008G105500 ureide permease, putative, expressed -
7 Sobic.009G109450 - -
8 Sobic.009G231300 drought induced 19 protein, putative, expressed -
9 Sobic.009G078500 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.009G002500 polygalacturonase inhibitor precursor, putative, expressed -
11 Sobic.008G108900 GRF zinc finger family protein, expressed -
12 Sobic.008G124100 - -
13 Sobic.002G051450 - -
14 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.001G422366 - -
16 Sobic.004G164650 - -
17 Sobic.010G175700 - -
18 Sobic.005G130100 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
19 Sobic.009G113600 - -
20 Sobic.008G009500 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic006G020500 Sobic006G020500 Sobic007G094600 Sobic007G094600 Sobic006G020500--Sobic007G094600 Sobic006G020600 Sobic006G020600 Sobic006G020500--Sobic006G020600 Sobic002G314600 Sobic002G314600 Sobic006G020500--Sobic002G314600 Sobic002G051400 Sobic002G051400 Sobic006G020500--Sobic002G051400 Sobic010G091700 Sobic010G091700 Sobic006G020500--Sobic010G091700 Sobic008G105500 Sobic008G105500 Sobic006G020500--Sobic008G105500 Sobic009G109450 Sobic009G109450 Sobic006G020500--Sobic009G109450 Sobic009G231300 Sobic009G231300 Sobic006G020500--Sobic009G231300 Sobic009G078500 Sobic009G078500 Sobic006G020500--Sobic009G078500 Sobic007G094600--Sobic006G020500 Sobic007G094600--Sobic006G020600 Sobic007G094600--Sobic002G314600 Sobic007G094600--Sobic002G051400 Sobic007G094600--Sobic010G091700 Sobic007G094600--Sobic009G078500 Sobic008G124100 Sobic008G124100 Sobic007G094600--Sobic008G124100 Sobic003G422000 Sobic003G422000 Sobic007G094600--Sobic003G422000 Sobic008G108900 Sobic008G108900 Sobic007G094600--Sobic008G108900 Sobic006G020600--Sobic007G094600 Sobic006G020600--Sobic006G020500 Sobic006G020600--Sobic002G051400 Sobic006G020600--Sobic008G124100 Sobic010G146200 Sobic010G146200 Sobic006G020600--Sobic010G146200 Sobic006G020600--Sobic002G314600 Sobic006G020600--Sobic009G078500 Sobic006G020600--Sobic009G231300 Sobic003G176100 Sobic003G176100 Sobic006G020600--Sobic003G176100 Sobic002G314600--Sobic006G020500 Sobic002G314600--Sobic007G094600 Sobic002G314600--Sobic006G020600 Sobic002G314600--Sobic010G091700 Sobic002G314600--Sobic008G124100 Sobic002G314600--Sobic002G051400 Sobic005G130800 Sobic005G130800 Sobic002G314600--Sobic005G130800 Sobic003G089801 Sobic003G089801 Sobic002G314600--Sobic003G089801 Sobic002G314600--Sobic009G109450 Sobic009G113600 Sobic009G113600 Sobic002G051400--Sobic009G113600 Sobic007G059300 Sobic007G059300 Sobic002G051400--Sobic007G059300 Sobic002G051400--Sobic008G108900 Sobic002G062300 Sobic002G062300 Sobic002G051400--Sobic002G062300 Sobic002G051400--Sobic003G176100 Sobic009G196700 Sobic009G196700 Sobic002G051400--Sobic009G196700 Sobic002G051400--Sobic010G146200 SobicK024000 SobicK024000 Sobic002G051400--SobicK024000 Sobic008G009500 Sobic008G009500 Sobic002G051400--Sobic008G009500 Sobic010G091700--Sobic006G020500 Sobic010G091700--Sobic007G094600 Sobic001G184400 Sobic001G184400 Sobic010G091700--Sobic001G184400 Sobic001G247800 Sobic001G247800 Sobic010G091700--Sobic001G247800 Sobic010G091700--Sobic002G314600 Sobic002G367300 Sobic002G367300 Sobic010G091700--Sobic002G367300 Sobic010G208500 Sobic010G208500 Sobic010G091700--Sobic010G208500 Sobic010G091700--Sobic006G020600 Sobic010G091700--Sobic002G051400 Sobic003G357500 Sobic003G357500 Sobic008G105500--Sobic003G357500 Sobic009G002500 Sobic009G002500 Sobic008G105500--Sobic009G002500 Sobic008G105500--Sobic006G020500 Sobic002G285200 Sobic002G285200 Sobic008G105500--Sobic002G285200 Sobic008G105500--Sobic009G078500 Sobic008G105500--Sobic009G231300 Sobic004G076732 Sobic004G076732 Sobic008G105500--Sobic004G076732 Sobic007G073400 Sobic007G073400 Sobic008G105500--Sobic007G073400 Sobic004G212800 Sobic004G212800 Sobic008G105500--Sobic004G212800 Sobic009G109450--Sobic009G078500 Sobic004G199600 Sobic004G199600 Sobic009G109450--Sobic004G199600 Sobic009G180200 Sobic009G180200 Sobic009G109450--Sobic009G180200 Sobic005G130100 Sobic005G130100 Sobic009G109450--Sobic005G130100 Sobic009G109450--Sobic009G231300 Sobic006G196000 Sobic006G196000 Sobic009G109450--Sobic006G196000 Sobic005G121800 Sobic005G121800 Sobic009G109450--Sobic005G121800 Sobic002G376900 Sobic002G376900 Sobic009G109450--Sobic002G376900 Sobic009G110366 Sobic009G110366 Sobic009G109450--Sobic009G110366 Sobic009G231300--Sobic005G130100 Sobic009G231300--Sobic009G180200 Sobic009G231300--Sobic009G109450 Sobic009G231300--Sobic009G078500 Sobic007G156500 Sobic007G156500 Sobic009G231300--Sobic007G156500 Sobic005G003200 Sobic005G003200 Sobic009G231300--Sobic005G003200 Sobic003G258400 Sobic003G258400 Sobic009G231300--Sobic003G258400 Sobic009G231300--Sobic004G199600 Sobic010G050600 Sobic010G050600 Sobic009G231300--Sobic010G050600 Sobic009G078500--Sobic004G199600 Sobic009G078500--Sobic005G130100 Sobic009G078500--Sobic009G109450 Sobic009G078500--Sobic009G180200 Sobic009G078500--Sobic009G231300 Sobic009G078500--Sobic010G146200 Sobic001G363100 Sobic001G363100 Sobic009G078500--Sobic001G363100 Sobic009G064766 Sobic009G064766 Sobic009G078500--Sobic009G064766 Sobic009G078500--Sobic003G176100
Octagon: transcription factors


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