Gene annotation
Transcriptome id Sobic.010G175700.1
Synonym
Functional annotation -
UniProt A0A194YJW9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g53950.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
2 Sobic.003G089801 - -
3 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.009G113200 cyclase/dehydrase family protein, expressed -
5 Sobic.004G180800 seven in absentia protein family domain containing protein, expressed -
6 Sobic.003G035332 - -
7 Sobic.003G035332 - -
8 Sobic.003G035332 - -
9 Sobic.010G221700 - -
10 Sobic.006G020500 3-ketoacyl-CoA synthase 6, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.007G045100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G099401 - -
13 Sobic.008G105500 ureide permease, putative, expressed -
14 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G310166 - -
16 Sobic.007G038432 - -
17 Sobic.002G314600 expressed protein -
18 Sobic.004G164650 - -
19 Sobic.003G244800 - -
20 Sobic.001G422366 - -


Gene co-expression network
sample Sobic010G175700 Sobic010G175700 Sobic005G195700 Sobic005G195700 Sobic010G175700--Sobic005G195700 Sobic003G089801 Sobic003G089801 Sobic010G175700--Sobic003G089801 Sobic002G285200 Sobic002G285200 Sobic010G175700--Sobic002G285200 Sobic009G113200 Sobic009G113200 Sobic010G175700--Sobic009G113200 Sobic004G180800 Sobic004G180800 Sobic010G175700--Sobic004G180800 Sobic003G035332 Sobic003G035332 Sobic010G175700--Sobic003G035332 Sobic010G221700 Sobic010G221700 Sobic010G175700--Sobic010G221700 Sobic005G195700--Sobic010G175700 Sobic005G195700--Sobic010G221700 Sobic005G195700--Sobic002G285200 Sobic002G099401 Sobic002G099401 Sobic005G195700--Sobic002G099401 Sobic007G038432 Sobic007G038432 Sobic005G195700--Sobic007G038432 Sobic005G195700--Sobic003G035332 Sobic010G091700 Sobic010G091700 Sobic005G195700--Sobic010G091700 Sobic003G089801--Sobic004G180800 Sobic003G089801--Sobic009G113200 Sobic003G089801--Sobic010G175700 Sobic003G089801--Sobic003G035332 Sobic005G130800 Sobic005G130800 Sobic003G089801--Sobic005G130800 Sobic003G089801--Sobic002G099401 Sobic003G089801--Sobic010G221700 Sobic004G076732 Sobic004G076732 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic007G115000 Sobic007G115000 Sobic002G285200--Sobic007G115000 Sobic004G212800 Sobic004G212800 Sobic002G285200--Sobic004G212800 SobicK009900 SobicK009900 Sobic002G285200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G285200--Sobic001G253100 Sobic004G164600 Sobic004G164600 Sobic002G285200--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic002G285200--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic002G285200--Sobic003G424100 Sobic009G113200--Sobic003G089801 Sobic009G113200--Sobic003G035332 Sobic009G113200--Sobic004G180800 Sobic009G113200--Sobic002G099401 Sobic001G310166 Sobic001G310166 Sobic009G113200--Sobic001G310166 Sobic009G161350 Sobic009G161350 Sobic009G113200--Sobic009G161350 Sobic009G113200--Sobic010G221700 Sobic004G180800--Sobic003G089801 Sobic004G180800--Sobic009G113200 Sobic004G180800--Sobic010G175700 Sobic004G180800--Sobic003G035332 Sobic004G180800--Sobic005G130800 Sobic004G180800--Sobic002G099401 Sobic004G180800--Sobic010G221700 Sobic003G035332--Sobic003G035332 Sobic003G035332--Sobic002G099401 Sobic003G035332--Sobic001G310166 Sobic003G035332--Sobic009G113200 Sobic003G035332--Sobic010G221700 Sobic007G104000 Sobic007G104000 Sobic003G035332--Sobic007G104000 Sobic004G043400 Sobic004G043400 Sobic003G035332--Sobic004G043400 Sobic003G035332--Sobic007G038432 Sobic010G221700--Sobic002G099401 Sobic010G221700--Sobic001G310166 Sobic010G221700--Sobic003G035332 Sobic010G221700--Sobic005G195700 Sobic010G221700--Sobic004G043400 Sobic010G221700--Sobic009G113200 Sobic010G221700--Sobic010G175700
Octagon: transcription factors


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