Gene annotation
Transcriptome id Sobic.004G164650.5,Sobic.004G164650.1,Sobic.004G164650.3,Sobic.004G164650.2,Sobic.004G164650.4
Synonym -
Functional annotation -
UniProt A0A1Z5RMU1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G115000 - -
2 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
3 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
5 Sobic.001G253100 3-5 exonuclease family protein, putative, expressed -
6 Sobic.008G108900 GRF zinc finger family protein, expressed -
7 Sobic.004G195700 heavy metal associated domain containing protein, expressed -
8 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
9 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
10 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.002G062300 expressed protein -
12 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
13 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
16 Sobic.006G020500 3-ketoacyl-CoA synthase 6, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.010G208500 - -
18 Sobic.008G009500 pentatricopeptide, putative, expressed -
19 Sobic.002G221700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
20 Sobic.007G121400 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT


Gene co-expression network
sample Sobic004G164650 Sobic004G164650 Sobic007G115000 Sobic007G115000 Sobic004G164650--Sobic007G115000 Sobic002G285200 Sobic002G285200 Sobic004G164650--Sobic002G285200 Sobic005G212600 Sobic005G212600 Sobic004G164650--Sobic005G212600 Sobic004G076732 Sobic004G076732 Sobic004G164650--Sobic004G076732 Sobic001G253100 Sobic001G253100 Sobic004G164650--Sobic001G253100 Sobic008G108900 Sobic008G108900 Sobic004G164650--Sobic008G108900 Sobic004G195700 Sobic004G195700 Sobic004G164650--Sobic004G195700 Sobic006G132200 Sobic006G132200 Sobic004G164650--Sobic006G132200 Sobic003G424100 Sobic003G424100 Sobic004G164650--Sobic003G424100 Sobic007G115000--Sobic005G212600 Sobic007G115000--Sobic002G285200 Sobic007G115000--Sobic001G253100 Sobic008G091900 Sobic008G091900 Sobic007G115000--Sobic008G091900 Sobic007G115000--Sobic006G132200 Sobic002G062300 Sobic002G062300 Sobic007G115000--Sobic002G062300 Sobic007G115000--Sobic004G164650 Sobic008G036500 Sobic008G036500 Sobic007G115000--Sobic008G036500 Sobic005G117801 Sobic005G117801 Sobic007G115000--Sobic005G117801 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic002G285200--Sobic007G115000 Sobic004G212800 Sobic004G212800 Sobic002G285200--Sobic004G212800 SobicK009900 SobicK009900 Sobic002G285200--SobicK009900 Sobic002G285200--Sobic001G253100 Sobic004G164600 Sobic004G164600 Sobic002G285200--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic002G285200--Sobic007G073400 Sobic002G285200--Sobic003G424100 Sobic005G212600--Sobic002G062300 Sobic005G212600--Sobic001G253100 Sobic009G113600 Sobic009G113600 Sobic005G212600--Sobic009G113600 Sobic005G212600--Sobic006G132200 Sobic005G212600--Sobic008G108900 Sobic005G212600--Sobic008G091900 Sobic002G221200 Sobic002G221200 Sobic005G212600--Sobic002G221200 Sobic008G009500 Sobic008G009500 Sobic005G212600--Sobic008G009500 SobicK024000 SobicK024000 Sobic005G212600--SobicK024000 Sobic004G076732--SobicK009900 Sobic004G076732--Sobic002G410200 Sobic004G076732--Sobic001G253100 Sobic004G076732--Sobic008G009500 Sobic004G076732--Sobic007G073400 Sobic009G209800 Sobic009G209800 Sobic004G076732--Sobic009G209800 Sobic008G042250 Sobic008G042250 Sobic004G076732--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic004G076732--Sobic005G110430 Sobic004G076732--Sobic004G212800 Sobic001G253100--Sobic005G117801 Sobic001G253100--Sobic009G209800 Sobic001G253100--Sobic005G110430 Sobic001G253100--Sobic008G042250 Sobic001G253100--Sobic004G076732 Sobic001G240400 Sobic001G240400 Sobic001G253100--Sobic001G240400 Sobic001G253100--Sobic008G091900 Sobic008G049701 Sobic008G049701 Sobic001G253100--Sobic008G049701 Sobic001G253100--SobicK009900 Sobic008G108900--Sobic006G132200 Sobic009G196700 Sobic009G196700 Sobic008G108900--Sobic009G196700 Sobic008G108900--Sobic002G062300 Sobic008G108900--Sobic009G113600 Sobic007G059300 Sobic007G059300 Sobic008G108900--Sobic007G059300 Sobic008G108900--Sobic005G212600 Sobic003G176100 Sobic003G176100 Sobic008G108900--Sobic003G176100 Sobic002G051400 Sobic002G051400 Sobic008G108900--Sobic002G051400 Sobic003G031750 Sobic003G031750 Sobic008G108900--Sobic003G031750 Sobic005G054300 Sobic005G054300 Sobic004G195700--Sobic005G054300 Sobic004G195700--Sobic005G212600 Sobic005G054600 Sobic005G054600 Sobic004G195700--Sobic005G054600 Sobic004G195700--Sobic008G108900 Sobic004G195700--Sobic004G164650 Sobic004G195700--Sobic002G062300 Sobic005G012000 Sobic005G012000 Sobic004G195700--Sobic005G012000 Sobic001G271000 Sobic001G271000 Sobic004G195700--Sobic001G271000 Sobic004G195700--Sobic007G115000 Sobic006G132200--Sobic008G108900 Sobic006G132200--Sobic009G196700 Sobic006G132200--Sobic002G062300 Sobic006G132200--Sobic009G113600 Sobic006G132200--Sobic005G212600 Sobic006G132200--Sobic007G059300 Sobic006G132200--Sobic003G031750 Sobic006G132200--Sobic008G091900 Sobic008G031350 Sobic008G031350 Sobic006G132200--Sobic008G031350 Sobic003G424100--Sobic004G164600 Sobic001G046600 Sobic001G046600 Sobic003G424100--Sobic001G046600 Sobic003G424100--Sobic004G212800 Sobic004G240900 Sobic004G240900 Sobic003G424100--Sobic004G240900 Sobic003G424100--Sobic007G073400 Sobic009G059600 Sobic009G059600 Sobic003G424100--Sobic009G059600 Sobic007G099500 Sobic007G099500 Sobic003G424100--Sobic007G099500 Sobic004G016500 Sobic004G016500 Sobic003G424100--Sobic004G016500 Sobic008G068800 Sobic008G068800 Sobic003G424100--Sobic008G068800
Octagon: transcription factors


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