Gene annotation
Transcriptome id Sobic.002G285200.1
Synonym SbSAUR19, Sb02g031760, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR53 - Auxin-responsive SAUR gene family member, expressed
UniProt A0A1W0W691
Pfam PF02519
Panther DB PTHR31175
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G29430 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37480.1 : OsSAUR53 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
2 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G115000 - -
4 Sobic.004G212800 - -
5 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
6 Sobic.001G253100 3-5 exonuclease family protein, putative, expressed -
7 Sobic.004G164600 - -
8 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
9 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
10 Sobic.004G164650 - -
11 Sobic.003G244800 - -
12 Sobic.008G036500 - -
13 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
15 Sobic.008G009500 pentatricopeptide, putative, expressed -
16 Sobic.001G028600 expressed protein -
17 Sobic.008G042250 - -
18 Sobic.005G110430 - -
19 Sobic.009G059600 KIP1, putative, expressed -
20 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA


Gene co-expression network
sample Sobic002G285200 Sobic002G285200 Sobic004G076732 Sobic004G076732 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic007G115000 Sobic007G115000 Sobic002G285200--Sobic007G115000 Sobic004G212800 Sobic004G212800 Sobic002G285200--Sobic004G212800 SobicK009900 SobicK009900 Sobic002G285200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G285200--Sobic001G253100 Sobic004G164600 Sobic004G164600 Sobic002G285200--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic002G285200--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic002G285200--Sobic003G424100 Sobic004G076732--SobicK009900 Sobic004G076732--Sobic002G410200 Sobic004G076732--Sobic001G253100 Sobic008G009500 Sobic008G009500 Sobic004G076732--Sobic008G009500 Sobic004G076732--Sobic007G073400 Sobic009G209800 Sobic009G209800 Sobic004G076732--Sobic009G209800 Sobic008G042250 Sobic008G042250 Sobic004G076732--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic004G076732--Sobic005G110430 Sobic004G076732--Sobic004G212800 Sobic002G410200--Sobic004G076732 Sobic002G410200--Sobic009G209800 Sobic002G410200--SobicK009900 Sobic002G410200--Sobic001G253100 Sobic003G244800 Sobic003G244800 Sobic002G410200--Sobic003G244800 Sobic005G139800 Sobic005G139800 Sobic002G410200--Sobic005G139800 Sobic002G410200--Sobic008G042250 Sobic002G410200--Sobic008G009500 Sobic008G049701 Sobic008G049701 Sobic002G410200--Sobic008G049701 Sobic005G212600 Sobic005G212600 Sobic007G115000--Sobic005G212600 Sobic007G115000--Sobic002G285200 Sobic007G115000--Sobic001G253100 Sobic008G091900 Sobic008G091900 Sobic007G115000--Sobic008G091900 Sobic006G132200 Sobic006G132200 Sobic007G115000--Sobic006G132200 Sobic002G062300 Sobic002G062300 Sobic007G115000--Sobic002G062300 Sobic004G164650 Sobic004G164650 Sobic007G115000--Sobic004G164650 Sobic008G036500 Sobic008G036500 Sobic007G115000--Sobic008G036500 Sobic005G117801 Sobic005G117801 Sobic007G115000--Sobic005G117801 Sobic004G212800--Sobic007G073400 Sobic004G212800--Sobic004G164600 Sobic001G024200 Sobic001G024200 Sobic004G212800--Sobic001G024200 Sobic001G345333 Sobic001G345333 Sobic004G212800--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G212800--Sobic002G007250 Sobic010G248200 Sobic010G248200 Sobic004G212800--Sobic010G248200 Sobic004G212800--Sobic004G076732 Sobic008G161401 Sobic008G161401 Sobic004G212800--Sobic008G161401 Sobic004G112500 Sobic004G112500 Sobic004G212800--Sobic004G112500 SobicK009900--Sobic004G076732 SobicK009900--Sobic005G110430 SobicK009900--Sobic001G253100 SobicK009900--Sobic008G042250 SobicK009900--Sobic008G049701 SobicK009900--Sobic002G410200 Sobic001G287301 Sobic001G287301 SobicK009900--Sobic001G287301 SobicK009900--Sobic005G117801 SobicK009900--Sobic009G209800 Sobic001G253100--Sobic005G117801 Sobic001G253100--Sobic009G209800 Sobic001G253100--Sobic005G110430 Sobic001G253100--Sobic008G042250 Sobic001G253100--Sobic004G076732 Sobic001G240400 Sobic001G240400 Sobic001G253100--Sobic001G240400 Sobic001G253100--Sobic008G091900 Sobic001G253100--Sobic008G049701 Sobic001G253100--SobicK009900 Sobic004G164600--Sobic004G212800 Sobic004G164600--Sobic005G110430 Sobic004G164600--Sobic007G073400 Sobic004G164600--Sobic008G042250 Sobic008G157950 Sobic008G157950 Sobic004G164600--Sobic008G157950 Sobic004G164600--Sobic001G345333 Sobic004G164600--Sobic002G007250 Sobic004G164600--SobicK009900 Sobic004G164600--Sobic004G076732 Sobic007G073400--Sobic004G212800 Sobic007G073400--Sobic004G164600 Sobic007G073400--Sobic004G076732 Sobic007G073400--Sobic008G009500 Sobic009G113600 Sobic009G113600 Sobic007G073400--Sobic009G113600 Sobic008G031350 Sobic008G031350 Sobic007G073400--Sobic008G031350 Sobic007G073400--Sobic008G042250 Sobic007G073400--Sobic005G110430 Sobic004G143700 Sobic004G143700 Sobic007G073400--Sobic004G143700 Sobic003G424100--Sobic004G164600 Sobic001G046600 Sobic001G046600 Sobic003G424100--Sobic001G046600 Sobic003G424100--Sobic004G212800 Sobic004G240900 Sobic004G240900 Sobic003G424100--Sobic004G240900 Sobic003G424100--Sobic007G073400 Sobic009G059600 Sobic009G059600 Sobic003G424100--Sobic009G059600 Sobic007G099500 Sobic007G099500 Sobic003G424100--Sobic007G099500 Sobic004G016500 Sobic004G016500 Sobic003G424100--Sobic004G016500 Sobic008G068800 Sobic008G068800 Sobic003G424100--Sobic008G068800
Octagon: transcription factors


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