Gene annotation
Transcriptome id Sobic.007G121400.1
Synonym SUVH6, Sb07g019850, SDG23
Functional annotation YDG/SRA domain containing protein, expressed
UniProt C5YKQ4
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF349
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G22740 : SU(VAR)3-9 homolog 6
RAP-DB (Rice) LOC_Os08g30910.1 : YDG/SRA domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006145
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G286900 - -
2 Sobic.010G208500 - -
3 Sobic.004G076732 - K14800: pre-rRNA-processing protein TSR2
4 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
5 Sobic.004G164600 - -
6 Sobic.009G109101 - -
7 Sobic.001G253100 3-5 exonuclease family protein, putative, expressed -
8 Sobic.008G031350 - -
9 Sobic.008G009500 pentatricopeptide, putative, expressed -
10 Sobic.007G099500 hypothetical protein -
11 Sobic.005G110430 - -
12 Sobic.002G062300 expressed protein -
13 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
14 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
15 Sobic.007G115000 - -
16 Sobic.003G128600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNAJ heat shock N-terminal domain-containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
17 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
18 Sobic.008G168600 SET domain containing protein, expressed -
19 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
20 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic007G121400 Sobic007G121400 Sobic004G286900 Sobic004G286900 Sobic007G121400--Sobic004G286900 Sobic010G208500 Sobic010G208500 Sobic007G121400--Sobic010G208500 Sobic004G076732 Sobic004G076732 Sobic007G121400--Sobic004G076732 Sobic005G212600 Sobic005G212600 Sobic007G121400--Sobic005G212600 Sobic004G164600 Sobic004G164600 Sobic007G121400--Sobic004G164600 Sobic009G109101 Sobic009G109101 Sobic007G121400--Sobic009G109101 Sobic001G253100 Sobic001G253100 Sobic007G121400--Sobic001G253100 Sobic008G031350 Sobic008G031350 Sobic007G121400--Sobic008G031350 Sobic008G009500 Sobic008G009500 Sobic007G121400--Sobic008G009500 Sobic008G068800 Sobic008G068800 Sobic004G286900--Sobic008G068800 Sobic004G286900--Sobic007G121400 Sobic009G059600 Sobic009G059600 Sobic004G286900--Sobic009G059600 Sobic007G115000 Sobic007G115000 Sobic004G286900--Sobic007G115000 Sobic007G142050 Sobic007G142050 Sobic004G286900--Sobic007G142050 Sobic003G424100 Sobic003G424100 Sobic004G286900--Sobic003G424100 Sobic004G286900--Sobic004G164600 Sobic003G128600 Sobic003G128600 Sobic004G286900--Sobic003G128600 Sobic004G286900--Sobic004G076732 Sobic006G132200 Sobic006G132200 Sobic010G208500--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic010G208500--Sobic008G108900 Sobic010G208500--Sobic003G424100 Sobic002G062300 Sobic002G062300 Sobic010G208500--Sobic002G062300 Sobic010G208500--Sobic005G212600 Sobic010G208500--Sobic009G109101 Sobic009G196700 Sobic009G196700 Sobic010G208500--Sobic009G196700 Sobic009G113600 Sobic009G113600 Sobic010G208500--Sobic009G113600 Sobic010G208500--Sobic007G115000 SobicK009900 SobicK009900 Sobic004G076732--SobicK009900 Sobic002G410200 Sobic002G410200 Sobic004G076732--Sobic002G410200 Sobic004G076732--Sobic001G253100 Sobic004G076732--Sobic008G009500 Sobic007G073400 Sobic007G073400 Sobic004G076732--Sobic007G073400 Sobic009G209800 Sobic009G209800 Sobic004G076732--Sobic009G209800 Sobic008G042250 Sobic008G042250 Sobic004G076732--Sobic008G042250 Sobic005G110430 Sobic005G110430 Sobic004G076732--Sobic005G110430 Sobic004G212800 Sobic004G212800 Sobic004G076732--Sobic004G212800 Sobic005G212600--Sobic002G062300 Sobic005G212600--Sobic001G253100 Sobic005G212600--Sobic009G113600 Sobic005G212600--Sobic006G132200 Sobic005G212600--Sobic008G108900 Sobic008G091900 Sobic008G091900 Sobic005G212600--Sobic008G091900 Sobic002G221200 Sobic002G221200 Sobic005G212600--Sobic002G221200 Sobic005G212600--Sobic008G009500 SobicK024000 SobicK024000 Sobic005G212600--SobicK024000 Sobic004G164600--Sobic004G212800 Sobic004G164600--Sobic005G110430 Sobic004G164600--Sobic007G073400 Sobic004G164600--Sobic008G042250 Sobic008G157950 Sobic008G157950 Sobic004G164600--Sobic008G157950 Sobic001G345333 Sobic001G345333 Sobic004G164600--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G164600--Sobic002G007250 Sobic004G164600--SobicK009900 Sobic004G164600--Sobic004G076732 Sobic009G109101--Sobic010G208500 Sobic009G109101--Sobic006G132200 Sobic009G109101--Sobic008G108900 Sobic009G109101--Sobic009G059600 Sobic009G109101--Sobic005G212600 Sobic009G109101--Sobic002G062300 Sobic009G109101--Sobic007G115000 Sobic009G109101--Sobic004G286900 Sobic009G109101--Sobic003G424100 Sobic005G117801 Sobic005G117801 Sobic001G253100--Sobic005G117801 Sobic001G253100--Sobic009G209800 Sobic001G253100--Sobic005G110430 Sobic001G253100--Sobic008G042250 Sobic001G253100--Sobic004G076732 Sobic001G240400 Sobic001G240400 Sobic001G253100--Sobic001G240400 Sobic001G253100--Sobic008G091900 Sobic008G049701 Sobic008G049701 Sobic001G253100--Sobic008G049701 Sobic001G253100--SobicK009900 Sobic008G031350--Sobic009G113600 Sobic008G031350--Sobic008G009500 Sobic008G031350--SobicK024000 Sobic008G031350--Sobic007G073400 Sobic008G031350--Sobic002G062300 Sobic008G031350--Sobic004G164600 Sobic008G031350--Sobic002G007250 Sobic008G031350--Sobic005G212600 Sobic008G031350--Sobic006G132200 Sobic008G009500--SobicK024000 Sobic008G009500--Sobic004G076732 Sobic008G009500--Sobic002G062300 Sobic008G009500--Sobic009G113600 Sobic008G009500--Sobic001G253100 Sobic008G009500--Sobic007G073400 Sobic008G009500--Sobic009G209800 Sobic008G009500--Sobic008G031350 Sobic005G221425 Sobic005G221425 Sobic008G009500--Sobic005G221425
Octagon: transcription factors


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