Gene annotation
Transcriptome id Sobic.003G128600.4,Sobic.003G128600.3,Sobic.003G128600.2
Synonym Sb03g010900
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DNAJ heat shock N-terminal domain-containing protein, putative, expressed
UniProt A0A1W0VX40 , A0A1W0VX53
Pfam PF07719 PF00226 PF13414
Panther DB PTHR22904 PTHR22904:SF338
NCBI CDD KOG0550; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09527; DnaJ homolog subfamily C member 7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12430 : Heat shock protein DnaJ with tetratricopeptide repeat
RAP-DB (Rice) LOC_Os05g31062.1 : DNAJ heat shock N-terminal domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a023992
Brachypodium KQK03864 , KQK03865
Barley -
Wheat TraesCS3A02G187500 , TraesCS3A02G187500 , TraesCS3A02G187500 , TraesCS3D02G191200 , TraesCS3D02G191200 , TraesCS3D02G191200 , TraesCS3D02G191200 , TraesCS3A02G187500 , TraesCS3A02G187500 , TraesCS3B02G216900 , TraesCS3B02G216900 , TraesCS3B02G216900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G059600 KIP1, putative, expressed -
2 Sobic.004G169501 - -
3 Sobic.003G015000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
4 Sobic.002G140800 RNA pseudouridine synthase, putative, expressed -
5 Sobic.004G286900 - -
6 Sobic.009G257300 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
7 Sobic.004G164600 - -
8 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
9 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
10 Sobic.001G192900 DNA excision repair protein ERCC-1, putative, expressed K10849: DNA excision repair protein ERCC-1
11 Sobic.007G116400 - -
12 Sobic.004G212800 - -
13 Sobic.004G088400 GTPase-activating protein, putative, expressed -
14 Sobic.007G073400 SHR5-receptor-like kinase, putative, expressed -
15 Sobic.002G050500 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
16 Sobic.003G204000 expressed protein -
17 Sobic.005G110430 - -
18 Sobic.002G090400 polygalacturonase, putative, expressed -
19 Sobic.002G177400 expressed protein -
20 Sobic.003G315332 - K15421: secretion-regulating guanine nucleotide exchange factor


Gene co-expression network
sample Sobic003G128600 Sobic003G128600 Sobic009G059600 Sobic009G059600 Sobic003G128600--Sobic009G059600 Sobic004G169501 Sobic004G169501 Sobic003G128600--Sobic004G169501 Sobic003G015000 Sobic003G015000 Sobic003G128600--Sobic003G015000 Sobic002G140800 Sobic002G140800 Sobic003G128600--Sobic002G140800 Sobic004G286900 Sobic004G286900 Sobic003G128600--Sobic004G286900 Sobic009G257300 Sobic009G257300 Sobic003G128600--Sobic009G257300 Sobic004G164600 Sobic004G164600 Sobic003G128600--Sobic004G164600 Sobic008G068800 Sobic008G068800 Sobic003G128600--Sobic008G068800 Sobic008G117200 Sobic008G117200 Sobic003G128600--Sobic008G117200 Sobic009G059600--Sobic004G164600 Sobic007G099500 Sobic007G099500 Sobic009G059600--Sobic007G099500 Sobic004G212800 Sobic004G212800 Sobic009G059600--Sobic004G212800 Sobic007G073400 Sobic007G073400 Sobic009G059600--Sobic007G073400 Sobic009G059600--Sobic008G068800 Sobic009G059600--Sobic003G128600 Sobic003G424100 Sobic003G424100 Sobic009G059600--Sobic003G424100 Sobic007G142050 Sobic007G142050 Sobic009G059600--Sobic007G142050 Sobic004G076732 Sobic004G076732 Sobic009G059600--Sobic004G076732 Sobic003G315332 Sobic003G315332 Sobic004G169501--Sobic003G315332 Sobic004G169501--Sobic007G142050 Sobic004G169501--Sobic008G068800 Sobic007G116400 Sobic007G116400 Sobic004G169501--Sobic007G116400 Sobic004G169501--Sobic008G117200 Sobic003G204000 Sobic003G204000 Sobic004G169501--Sobic003G204000 Sobic001G267233 Sobic001G267233 Sobic004G169501--Sobic001G267233 Sobic002G181450 Sobic002G181450 Sobic004G169501--Sobic002G181450 Sobic007G089600 Sobic007G089600 Sobic004G169501--Sobic007G089600 Sobic009G228201 Sobic009G228201 Sobic003G015000--Sobic009G228201 Sobic003G015000--Sobic009G257300 Sobic003G044900 Sobic003G044900 Sobic003G015000--Sobic003G044900 Sobic008G079100 Sobic008G079100 Sobic003G015000--Sobic008G079100 Sobic003G015000--Sobic004G212800 Sobic001G024200 Sobic001G024200 Sobic003G015000--Sobic001G024200 Sobic003G015000--Sobic003G128600 Sobic003G015000--Sobic009G059600 Sobic003G015000--Sobic007G073400 Sobic001G454301 Sobic001G454301 Sobic002G140800--Sobic001G454301 Sobic002G140800--Sobic003G128600 Sobic002G140800--Sobic004G169501 Sobic002G140800--Sobic007G116400 Sobic004G088400 Sobic004G088400 Sobic002G140800--Sobic004G088400 Sobic002G050500 Sobic002G050500 Sobic002G140800--Sobic002G050500 Sobic010G139301 Sobic010G139301 Sobic002G140800--Sobic010G139301 Sobic002G140800--Sobic008G117200 Sobic002G140800--Sobic009G059600 Sobic004G286900--Sobic008G068800 Sobic007G121400 Sobic007G121400 Sobic004G286900--Sobic007G121400 Sobic004G286900--Sobic009G059600 Sobic007G115000 Sobic007G115000 Sobic004G286900--Sobic007G115000 Sobic004G286900--Sobic007G142050 Sobic004G286900--Sobic003G424100 Sobic004G286900--Sobic004G164600 Sobic004G286900--Sobic003G128600 Sobic004G286900--Sobic004G076732 Sobic009G257300--Sobic003G015000 Sobic002G039600 Sobic002G039600 Sobic009G257300--Sobic002G039600 Sobic009G257300--Sobic007G073400 Sobic009G257300--Sobic009G228201 Sobic002G039500 Sobic002G039500 Sobic009G257300--Sobic002G039500 Sobic009G257300--Sobic008G079100 Sobic007G023700 Sobic007G023700 Sobic009G257300--Sobic007G023700 Sobic004G143700 Sobic004G143700 Sobic009G257300--Sobic004G143700 Sobic009G180200 Sobic009G180200 Sobic009G257300--Sobic009G180200 Sobic004G164600--Sobic004G212800 Sobic005G110430 Sobic005G110430 Sobic004G164600--Sobic005G110430 Sobic004G164600--Sobic007G073400 Sobic008G042250 Sobic008G042250 Sobic004G164600--Sobic008G042250 Sobic008G157950 Sobic008G157950 Sobic004G164600--Sobic008G157950 Sobic001G345333 Sobic001G345333 Sobic004G164600--Sobic001G345333 Sobic002G007250 Sobic002G007250 Sobic004G164600--Sobic002G007250 SobicK009900 SobicK009900 Sobic004G164600--SobicK009900 Sobic004G164600--Sobic004G076732 Sobic008G068800--Sobic007G116400 Sobic008G068800--Sobic007G142050 Sobic008G068800--Sobic003G204000 Sobic008G068800--Sobic004G169501 Sobic008G068800--Sobic009G059600 Sobic008G068800--Sobic003G315332 Sobic008G068800--Sobic004G286900 Sobic008G068800--Sobic003G424100 Sobic008G068800--Sobic001G024200 Sobic010G263800 Sobic010G263800 Sobic008G117200--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic008G117200--Sobic008G034600 Sobic001G094000 Sobic001G094000 Sobic008G117200--Sobic001G094000 Sobic008G117200--Sobic004G088400 Sobic002G177400 Sobic002G177400 Sobic008G117200--Sobic002G177400 Sobic002G421700 Sobic002G421700 Sobic008G117200--Sobic002G421700 Sobic008G117200--Sobic007G116400 Sobic007G011400 Sobic007G011400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800
Octagon: transcription factors


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