Gene annotation
Transcriptome id Sobic.002G050500.1
Synonym CVL1, Sb02g004230
Functional annotation type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed
UniProt C5XAF9
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF166
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G63240 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os07g07950.2 : type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a045145 , Zm00025a016588
Brachypodium KQK20641 , KQK20642
Barley HORVU5Hr1G104620.23 , HORVU5Hr1G104620.22 , HORVU5Hr1G104620.21 , HORVU5Hr1G104620.20 , HORVU5Hr1G104620.24 , HORVU5Hr1G104620.27 , HORVU5Hr1G104620.26 , HORVU5Hr1G104620.25 , HORVU5Hr1G104620.18 , HORVU5Hr1G104620.19 , HORVU5Hr1G104620.12 , HORVU5Hr1G104620.13 , HORVU5Hr1G104620.10 , HORVU5Hr1G104620.11 , HORVU5Hr1G104620.16 , HORVU5Hr1G104620.17 , HORVU5Hr1G104620.14 , HORVU5Hr1G104620.15 , HORVU5Hr1G104620.1 , HORVU5Hr1G104620.2 , HORVU5Hr1G104620.4 , HORVU5Hr1G104620.5 , HORVU5Hr1G104620.6 , HORVU5Hr1G104620.7 , HORVU5Hr1G104620.8 , HORVU5Hr1G104620.9
Wheat TraesCS5A02G432000
Populus PNT37907


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cDNA sequences
Sobic.002G050500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G210200 zinc finger domain, LSD1 subclass family protein, expressed -
2 Sobic.001G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
3 Sobic.002G140800 RNA pseudouridine synthase, putative, expressed -
4 Sobic.008G056350 - -
5 Sobic.001G045700 "CESA3-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA2 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.002G060450 - -
7 Sobic.001G454301 - -
8 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
9 Sobic.003G128600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNAJ heat shock N-terminal domain-containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
10 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
11 Sobic.009G059600 KIP1, putative, expressed -
12 Sobic.003G185250 - -
13 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
14 Sobic.007G224900 RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
15 Sobic.001G065300 GRF zinc finger family protein, expressed -
16 Sobic.004G085300 Sel1 repeat domain containing protein, putative, expressed -
17 Sobic.002G177400 expressed protein -
18 Sobic.005G009200 expressed protein -
19 Sobic.007G116400 - -
20 Sobic.006G269600 zinc finger, RING-type, putative, expressed -


Gene co-expression network
sample Sobic002G050500 Sobic002G050500 Sobic006G210200 Sobic006G210200 Sobic002G050500--Sobic006G210200 Sobic001G268700 Sobic001G268700 Sobic002G050500--Sobic001G268700 Sobic002G140800 Sobic002G140800 Sobic002G050500--Sobic002G140800 Sobic008G056350 Sobic008G056350 Sobic002G050500--Sobic008G056350 Sobic001G045700 Sobic001G045700 Sobic002G050500--Sobic001G045700 Sobic002G060450 Sobic002G060450 Sobic002G050500--Sobic002G060450 Sobic001G454301 Sobic001G454301 Sobic002G050500--Sobic001G454301 Sobic002G223300 Sobic002G223300 Sobic002G050500--Sobic002G223300 Sobic003G128600 Sobic003G128600 Sobic002G050500--Sobic003G128600 Sobic006G210200--Sobic002G050500 Sobic006G210200--Sobic001G454301 Sobic002G151600 Sobic002G151600 Sobic006G210200--Sobic002G151600 Sobic003G023400 Sobic003G023400 Sobic006G210200--Sobic003G023400 Sobic002G157200 Sobic002G157200 Sobic006G210200--Sobic002G157200 Sobic003G185250 Sobic003G185250 Sobic006G210200--Sobic003G185250 Sobic006G210200--Sobic002G060450 Sobic001G303675 Sobic001G303675 Sobic006G210200--Sobic001G303675 Sobic009G239351 Sobic009G239351 Sobic006G210200--Sobic009G239351 Sobic001G268700--Sobic002G050500 Sobic010G221200 Sobic010G221200 Sobic001G268700--Sobic010G221200 Sobic005G120600 Sobic005G120600 Sobic001G268700--Sobic005G120600 Sobic004G116500 Sobic004G116500 Sobic001G268700--Sobic004G116500 Sobic003G107900 Sobic003G107900 Sobic001G268700--Sobic003G107900 Sobic001G268700--Sobic002G223300 Sobic001G372900 Sobic001G372900 Sobic001G268700--Sobic001G372900 Sobic010G063566 Sobic010G063566 Sobic001G268700--Sobic010G063566 Sobic008G100400 Sobic008G100400 Sobic001G268700--Sobic008G100400 Sobic002G140800--Sobic001G454301 Sobic002G140800--Sobic003G128600 Sobic004G169501 Sobic004G169501 Sobic002G140800--Sobic004G169501 Sobic007G116400 Sobic007G116400 Sobic002G140800--Sobic007G116400 Sobic004G088400 Sobic004G088400 Sobic002G140800--Sobic004G088400 Sobic002G140800--Sobic002G050500 Sobic010G139301 Sobic010G139301 Sobic002G140800--Sobic010G139301 Sobic008G117200 Sobic008G117200 Sobic002G140800--Sobic008G117200 Sobic009G059600 Sobic009G059600 Sobic002G140800--Sobic009G059600 Sobic008G056350--Sobic002G050500 Sobic008G056350--Sobic001G454301 Sobic008G056350--Sobic009G239351 Sobic002G421700 Sobic002G421700 Sobic008G056350--Sobic002G421700 Sobic008G056350--Sobic002G060450 Sobic009G239301 Sobic009G239301 Sobic008G056350--Sobic009G239301 Sobic008G056350--Sobic002G223300 Sobic006G217200 Sobic006G217200 Sobic008G056350--Sobic006G217200 Sobic008G056350--Sobic002G140800 Sobic001G045700--Sobic002G157200 Sobic007G224900 Sobic007G224900 Sobic001G045700--Sobic007G224900 Sobic001G045700--Sobic003G185250 Sobic006G006500 Sobic006G006500 Sobic001G045700--Sobic006G006500 Sobic002G049000 Sobic002G049000 Sobic001G045700--Sobic002G049000 Sobic001G045700--Sobic002G060450 Sobic001G045700--Sobic002G050500 Sobic002G297800 Sobic002G297800 Sobic001G045700--Sobic002G297800 Sobic010G208500 Sobic010G208500 Sobic001G045700--Sobic010G208500 Sobic002G060450--Sobic003G185250 Sobic002G060450--Sobic002G049000 Sobic007G046900 Sobic007G046900 Sobic002G060450--Sobic007G046900 Sobic002G060450--Sobic006G210200 Sobic002G060450--Sobic006G006500 Sobic002G060450--Sobic001G045700 Sobic002G060450--Sobic002G050500 Sobic006G022500 Sobic006G022500 Sobic002G060450--Sobic006G022500 Sobic003G346000 Sobic003G346000 Sobic002G060450--Sobic003G346000 Sobic001G454301--Sobic007G116400 Sobic001G454301--Sobic002G421700 Sobic001G454301--Sobic008G117200 Sobic001G094000 Sobic001G094000 Sobic001G454301--Sobic001G094000 Sobic009G104300 Sobic009G104300 Sobic001G454301--Sobic009G104300 Sobic001G454301--Sobic009G239351 Sobic001G454301--Sobic001G303675 Sobic001G454301--Sobic002G140800 Sobic001G454301--Sobic006G217200 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic002G223300--Sobic006G210200 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic003G128600--Sobic009G059600 Sobic003G128600--Sobic004G169501 Sobic003G015000 Sobic003G015000 Sobic003G128600--Sobic003G015000 Sobic003G128600--Sobic002G140800 Sobic004G286900 Sobic004G286900 Sobic003G128600--Sobic004G286900 Sobic009G257300 Sobic009G257300 Sobic003G128600--Sobic009G257300 Sobic004G164600 Sobic004G164600 Sobic003G128600--Sobic004G164600 Sobic008G068800 Sobic008G068800 Sobic003G128600--Sobic008G068800 Sobic003G128600--Sobic008G117200
Octagon: transcription factors


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