Gene annotation
Transcriptome id Sobic.001G045700.1
Synonym CEV1, ATH-B, ATCESA3, CESA3, cellulose synthase, Sb01g004210, IXR1
Functional annotation "CESA3-like homologous to the Arabidopsis, up-regulated in addition of GA3" (PubMedID : 26198258)
CESA2 - cellulose synthase, expressed
UniProt C5WW42
Pfam PF13632 PF14569
Panther DB PTHR13301 PTHR13301:SF45
NCBI CDD -
KEGG Orthology K10999; cellulose synthase A
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05170 : Cellulose synthase family protein
RAP-DB (Rice) LOC_Os03g59340.1 : CESA2 - cellulose synthase, expressed
MaizeGDB (Corn) Zm00025a013415 , Zm00025a045374 , Zm00025a053914 , Zm00025a006680 , Zm00025a013618 , Zm00025a057238 , Zm00025a057237 , Zm00025a045530 , Zm00025a008673 , Zm00025a047054
Brachypodium KQK12572 , KQK12573 , KQK12571 , PNT64610 , PNT73945 , PNT73946 , KQK20392 , KQK12260 , KQK12261 , KQJ97023
Barley HORVU6Hr1G050750.1 , HORVU6Hr1G050750.3 , HORVU6Hr1G050750.2 , HORVU6Hr1G050750.5 , HORVU6Hr1G050750.4 , HORVU6Hr1G050750.7 , HORVU6Hr1G050750.6 , HORVU6Hr1G050750.9 , HORVU6Hr1G050750.8 , HORVU5Hr1G118270.21 , HORVU5Hr1G118270.20 , HORVU5Hr1G118270.23 , HORVU5Hr1G118270.22 , HORVU5Hr1G118270.25 , HORVU5Hr1G118270.24 , HORVU5Hr1G118270.27 , HORVU5Hr1G118270.26 , HORVU5Hr1G118270.29 , HORVU5Hr1G118270.28 , HORVU6Hr1G050750.20 , HORVU6Hr1G050750.21 , HORVU6Hr1G050750.22 , HORVU5Hr1G118270.30 , HORVU6Hr1G050750.15 , HORVU6Hr1G050750.11 , HORVU6Hr1G050750.13 , HORVU6Hr1G050750.12 , HORVU6Hr1G050750.19 , HORVU6Hr1G050750.18 , HORVU6Hr1G050750.14 , HORVU6Hr1G050750.17 , HORVU6Hr1G050750.16 , HORVU6Hr1G050750.10 , HORVU5Hr1G118270.6 , HORVU5Hr1G118270.7 , HORVU5Hr1G118270.4 , HORVU5Hr1G118270.5 , HORVU5Hr1G118270.2 , HORVU5Hr1G118270.3 , HORVU5Hr1G118270.1 , HORVU5Hr1G118270.8 , HORVU5Hr1G118270.9 , HORVU5Hr1G110000.1 , HORVU5Hr1G110000.3 , HORVU5Hr1G110000.2 , HORVU5Hr1G110000.5 , HORVU5Hr1G110000.4 , HORVU5Hr1G110000.7 , HORVU5Hr1G110000.6 , HORVU5Hr1G110000.9 , HORVU5Hr1G110000.8 , HORVU5Hr1G118270.19 , HORVU5Hr1G118270.14 , HORVU5Hr1G118270.15 , HORVU5Hr1G118270.16 , HORVU5Hr1G118270.17 , HORVU5Hr1G118270.10 , HORVU5Hr1G118270.11 , HORVU5Hr1G118270.12 , HORVU5Hr1G118270.13
Wheat TraesCS5D02G470400 , TraesCS5D02G470400 , TraesCS5D02G517200 , TraesCS5D02G517200 , TraesCS5D02G517200 , TraesCS2A02G102600 , TraesCS2D02G102100 , TraesCS1B02G136200 , TraesCS1B02G136200 , TraesCS2D02G102100 , TraesCS2B02G119700 , TraesCS2B02G119700 , TraesCS2B02G119700 , TraesCS5B02G469200 , TraesCS5B02G469200 , TraesCS5B02G469200 , TraesCS1A02G149300 , TraesCSU02G142500 , TraesCS6A02G077800 , TraesCS2D02G102100 , TraesCS6A02G077800 , TraesCS5A02G459400 , TraesCS5A02G459400
Populus PNT27650 , PNT19888 , PNT19889 , PNT29855 , PNT29856 , PNT27647 , PNT27646 , PNT27645 , PNT27649 , PNT27648 , PNT19893 , PNT19892 , PNT19891 , PNT19890 , PNT33691 , PNT33690 , PNT33693 , PNT33692 , PNT33694 , PNT56825 , PNT56824 , PNS98015 , PNS98014 , PNS98017 , PNS98016 , PNT35685 , PNT35686 , PNT35687 , PNT32307 , PNT32308


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cDNA sequences
Sobic.001G045700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G157200 expressed protein -
2 Sobic.007G224900 RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
3 Sobic.003G185250 - -
4 Sobic.006G006500 MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.002G049000 frigida, putative, expressed -
6 Sobic.002G060450 - -
7 Sobic.002G050500 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
8 Sobic.002G297800 growth regulating factor protein, putative, expressed -
9 Sobic.010G208500 - -
10 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
11 Sobic.006G210200 zinc finger domain, LSD1 subclass family protein, expressed -
12 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.002G061400 OsFBX237 - F-box domain containing protein, expressed -
14 Sobic.006G022500 OsFBD9 - F-box and FBD domain containing protein, expressed -
15 Sobic.001G252500 expressed protein -
16 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
17 Sobic.004G005400 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
18 Sobic.009G011500 expressed protein -
19 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13
20 Sobic.004G169501 - -


Gene co-expression network
sample Sobic001G045700 Sobic001G045700 Sobic002G157200 Sobic002G157200 Sobic001G045700--Sobic002G157200 Sobic007G224900 Sobic007G224900 Sobic001G045700--Sobic007G224900 Sobic003G185250 Sobic003G185250 Sobic001G045700--Sobic003G185250 Sobic006G006500 Sobic006G006500 Sobic001G045700--Sobic006G006500 Sobic002G049000 Sobic002G049000 Sobic001G045700--Sobic002G049000 Sobic002G060450 Sobic002G060450 Sobic001G045700--Sobic002G060450 Sobic002G050500 Sobic002G050500 Sobic001G045700--Sobic002G050500 Sobic002G297800 Sobic002G297800 Sobic001G045700--Sobic002G297800 Sobic010G208500 Sobic010G208500 Sobic001G045700--Sobic010G208500 Sobic008G034600 Sobic008G034600 Sobic002G157200--Sobic008G034600 Sobic002G157200--Sobic007G224900 Sobic004G211400 Sobic004G211400 Sobic002G157200--Sobic004G211400 Sobic002G157200--Sobic001G045700 Sobic006G210200 Sobic006G210200 Sobic002G157200--Sobic006G210200 Sobic002G157200--Sobic002G049000 Sobic009G022200 Sobic009G022200 Sobic002G157200--Sobic009G022200 Sobic002G421700 Sobic002G421700 Sobic002G157200--Sobic002G421700 Sobic002G061400 Sobic002G061400 Sobic002G157200--Sobic002G061400 Sobic007G224900--Sobic008G034600 Sobic007G224900--Sobic002G157200 Sobic007G224900--Sobic001G045700 Sobic001G179000 Sobic001G179000 Sobic007G224900--Sobic001G179000 Sobic007G224900--Sobic004G211400 Sobic009G059600 Sobic009G059600 Sobic007G224900--Sobic009G059600 Sobic008G117200 Sobic008G117200 Sobic007G224900--Sobic008G117200 Sobic007G224900--Sobic002G049000 Sobic007G224900--Sobic009G022200 Sobic004G193800 Sobic004G193800 Sobic003G185250--Sobic004G193800 Sobic003G185250--Sobic001G045700 Sobic003G185250--Sobic002G060450 Sobic003G185250--Sobic006G210200 Sobic001G454301 Sobic001G454301 Sobic003G185250--Sobic001G454301 Sobic003G163100 Sobic003G163100 Sobic003G185250--Sobic003G163100 Sobic003G185250--Sobic006G006500 Sobic003G023400 Sobic003G023400 Sobic003G185250--Sobic003G023400 Sobic005G110523 Sobic005G110523 Sobic003G185250--Sobic005G110523 Sobic006G006500--Sobic001G045700 Sobic006G006500--Sobic002G060450 Sobic006G006500--Sobic003G185250 Sobic001G261521 Sobic001G261521 Sobic006G006500--Sobic001G261521 Sobic001G303675 Sobic001G303675 Sobic006G006500--Sobic001G303675 Sobic006G006500--Sobic002G049000 Sobic007G079200 Sobic007G079200 Sobic006G006500--Sobic007G079200 Sobic006G006500--Sobic001G454301 Sobic006G006500--Sobic002G061400 Sobic003G346000 Sobic003G346000 Sobic002G049000--Sobic003G346000 Sobic002G049000--Sobic002G297800 Sobic002G090400 Sobic002G090400 Sobic002G049000--Sobic002G090400 Sobic008G068800 Sobic008G068800 Sobic002G049000--Sobic008G068800 Sobic007G011400 Sobic007G011400 Sobic002G049000--Sobic007G011400 Sobic002G049000--Sobic002G061400 Sobic001G094000 Sobic001G094000 Sobic002G049000--Sobic001G094000 Sobic002G049000--Sobic008G034600 Sobic001G394400 Sobic001G394400 Sobic002G049000--Sobic001G394400 Sobic002G060450--Sobic003G185250 Sobic002G060450--Sobic002G049000 Sobic007G046900 Sobic007G046900 Sobic002G060450--Sobic007G046900 Sobic002G060450--Sobic006G210200 Sobic002G060450--Sobic006G006500 Sobic002G060450--Sobic001G045700 Sobic002G060450--Sobic002G050500 Sobic006G022500 Sobic006G022500 Sobic002G060450--Sobic006G022500 Sobic002G060450--Sobic003G346000 Sobic002G050500--Sobic006G210200 Sobic001G268700 Sobic001G268700 Sobic002G050500--Sobic001G268700 Sobic002G140800 Sobic002G140800 Sobic002G050500--Sobic002G140800 Sobic008G056350 Sobic008G056350 Sobic002G050500--Sobic008G056350 Sobic002G050500--Sobic001G045700 Sobic002G050500--Sobic002G060450 Sobic002G050500--Sobic001G454301 Sobic002G223300 Sobic002G223300 Sobic002G050500--Sobic002G223300 Sobic003G128600 Sobic003G128600 Sobic002G050500--Sobic003G128600 Sobic002G297800--Sobic002G049000 Sobic003G204000 Sobic003G204000 Sobic002G297800--Sobic003G204000 Sobic002G297800--Sobic002G061400 Sobic002G297800--Sobic008G068800 Sobic009G231300 Sobic009G231300 Sobic002G297800--Sobic009G231300 Sobic009G257300 Sobic009G257300 Sobic002G297800--Sobic009G257300 Sobic004G212800 Sobic004G212800 Sobic002G297800--Sobic004G212800 Sobic002G313300 Sobic002G313300 Sobic002G297800--Sobic002G313300 Sobic002G297800--Sobic009G059600 Sobic006G132200 Sobic006G132200 Sobic010G208500--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic010G208500--Sobic008G108900 Sobic003G424100 Sobic003G424100 Sobic010G208500--Sobic003G424100 Sobic002G062300 Sobic002G062300 Sobic010G208500--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic010G208500--Sobic005G212600 Sobic009G109101 Sobic009G109101 Sobic010G208500--Sobic009G109101 Sobic009G196700 Sobic009G196700 Sobic010G208500--Sobic009G196700 Sobic009G113600 Sobic009G113600 Sobic010G208500--Sobic009G113600 Sobic007G115000 Sobic007G115000 Sobic010G208500--Sobic007G115000
Octagon: transcription factors


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