Gene annotation
Transcriptome id Sobic.001G310166.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8G3
Pfam -
Panther DB PTHR10366 PTHR10366:SF406
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15950 : cinnamoyl coa reductase 1
RAP-DB (Rice) LOC_Os02g56690.1 : dihydroflavonol-4-reductase, putative, expressed
MaizeGDB (Corn) Zm00025a049770
Brachypodium KQJ98430
Barley HORVU7Hr1G022220.6 , HORVU7Hr1G022220.3 , HORVU7Hr1G030380.2 , HORVU7Hr1G030380.5 , HORVU7Hr1G022220.5 , HORVU7Hr1G022220.4 , HORVU7Hr1G022220.7 , HORVU7Hr1G022220.1 , HORVU7Hr1G030380.3 , HORVU7Hr1G022220.2 , HORVU7Hr1G030380.10 , HORVU7Hr1G030380.12 , HORVU7Hr1G030500.5
Wheat TraesCS7B02G052600 , TraesCS7D02G150500 , TraesCS7A02G149000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G099401 - -
2 Sobic.003G035332 - -
3 Sobic.003G035332 - -
4 Sobic.003G035332 - -
5 Sobic.010G221700 - -
6 Sobic.009G113200 cyclase/dehydrase family protein, expressed -
7 Sobic.007G104000 Leucine Rich Repeat family protein, expressed -
8 Sobic.007G038432 - -
9 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
10 Sobic.004G043400 DNA binding protein, putative, expressed -
11 Sobic.003G089801 - -
12 Sobic.009G161350 - -
13 Sobic.010G175700 - -
14 Sobic.004G180800 seven in absentia protein family domain containing protein, expressed -
15 Sobic.007G045100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.004G161650 - -
17 Sobic.005G101850 - -
18 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.002G300100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR30 - Auxin-responsive SAUR gene family member, expressed -
20 Sobic.002G012200 expressed protein -


Gene co-expression network
sample Sobic001G310166 Sobic001G310166 Sobic002G099401 Sobic002G099401 Sobic001G310166--Sobic002G099401 Sobic003G035332 Sobic003G035332 Sobic001G310166--Sobic003G035332 Sobic010G221700 Sobic010G221700 Sobic001G310166--Sobic010G221700 Sobic009G113200 Sobic009G113200 Sobic001G310166--Sobic009G113200 Sobic007G104000 Sobic007G104000 Sobic001G310166--Sobic007G104000 Sobic007G038432 Sobic007G038432 Sobic001G310166--Sobic007G038432 Sobic005G195700 Sobic005G195700 Sobic001G310166--Sobic005G195700 Sobic002G099401--Sobic003G035332 Sobic002G099401--Sobic001G310166 Sobic002G099401--Sobic010G221700 Sobic002G099401--Sobic009G113200 Sobic002G099401--Sobic007G104000 Sobic004G043400 Sobic004G043400 Sobic002G099401--Sobic004G043400 Sobic002G099401--Sobic007G038432 Sobic003G035332--Sobic003G035332 Sobic003G035332--Sobic002G099401 Sobic003G035332--Sobic001G310166 Sobic003G035332--Sobic009G113200 Sobic003G035332--Sobic010G221700 Sobic003G035332--Sobic007G104000 Sobic003G035332--Sobic004G043400 Sobic003G035332--Sobic007G038432 Sobic010G221700--Sobic002G099401 Sobic010G221700--Sobic001G310166 Sobic010G221700--Sobic003G035332 Sobic010G221700--Sobic005G195700 Sobic010G221700--Sobic004G043400 Sobic010G221700--Sobic009G113200 Sobic010G175700 Sobic010G175700 Sobic010G221700--Sobic010G175700 Sobic003G089801 Sobic003G089801 Sobic009G113200--Sobic003G089801 Sobic009G113200--Sobic003G035332 Sobic004G180800 Sobic004G180800 Sobic009G113200--Sobic004G180800 Sobic009G113200--Sobic002G099401 Sobic009G113200--Sobic001G310166 Sobic009G161350 Sobic009G161350 Sobic009G113200--Sobic009G161350 Sobic009G113200--Sobic010G221700 Sobic007G104000--Sobic003G035332 Sobic007G104000--Sobic002G099401 Sobic007G104000--Sobic007G038432 Sobic007G104000--Sobic001G310166 Sobic007G104000--Sobic009G113200 Sobic007G104000--Sobic010G221700 Sobic007G104000--Sobic004G043400 Sobic007G038432--Sobic003G035332 Sobic007G038432--Sobic002G099401 Sobic007G038432--Sobic005G195700 Sobic007G038432--Sobic007G104000 Sobic007G038432--Sobic010G221700 Sobic007G038432--Sobic004G043400 Sobic007G038432--Sobic001G310166 Sobic005G195700--Sobic010G175700 Sobic005G195700--Sobic010G221700 Sobic002G285200 Sobic002G285200 Sobic005G195700--Sobic002G285200 Sobic005G195700--Sobic002G099401 Sobic005G195700--Sobic007G038432 Sobic005G195700--Sobic003G035332 Sobic010G091700 Sobic010G091700 Sobic005G195700--Sobic010G091700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.