Gene annotation
Transcriptome id Sobic.004G043400.1
Synonym Sb04g003730
Functional annotation DNA binding protein, putative, expressed
UniProt C5XUR2
Pfam PF14303
Panther DB PTHR11260 PTHR11260:SF248
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47680 : DNA binding
RAP-DB (Rice) LOC_Os06g42890.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G221700 - -
2 Sobic.003G035332 - -
3 Sobic.003G035332 - -
4 Sobic.003G035332 - -
5 Sobic.002G099401 - -
6 Sobic.007G038432 - -
7 Sobic.001G310166 - -
8 Sobic.009G113200 cyclase/dehydrase family protein, expressed -
9 Sobic.002G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
10 Sobic.007G104000 Leucine Rich Repeat family protein, expressed -
11 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
12 Sobic.003G089801 - -
13 Sobic.009G161350 - -
14 Sobic.002G012200 expressed protein -
15 Sobic.002G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
16 Sobic.010G175700 - -
17 Sobic.004G164650 - -
18 Sobic.002G065700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.005G216100 Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
20 Sobic.004G180800 seven in absentia protein family domain containing protein, expressed -


Gene co-expression network
sample Sobic004G043400 Sobic004G043400 Sobic010G221700 Sobic010G221700 Sobic004G043400--Sobic010G221700 Sobic003G035332 Sobic003G035332 Sobic004G043400--Sobic003G035332 Sobic002G099401 Sobic002G099401 Sobic004G043400--Sobic002G099401 Sobic007G038432 Sobic007G038432 Sobic004G043400--Sobic007G038432 Sobic001G310166 Sobic001G310166 Sobic004G043400--Sobic001G310166 Sobic009G113200 Sobic009G113200 Sobic004G043400--Sobic009G113200 Sobic002G065600 Sobic002G065600 Sobic004G043400--Sobic002G065600 Sobic010G221700--Sobic002G099401 Sobic010G221700--Sobic001G310166 Sobic010G221700--Sobic003G035332 Sobic005G195700 Sobic005G195700 Sobic010G221700--Sobic005G195700 Sobic010G221700--Sobic004G043400 Sobic010G221700--Sobic009G113200 Sobic010G175700 Sobic010G175700 Sobic010G221700--Sobic010G175700 Sobic003G035332--Sobic003G035332 Sobic003G035332--Sobic002G099401 Sobic003G035332--Sobic001G310166 Sobic003G035332--Sobic009G113200 Sobic003G035332--Sobic010G221700 Sobic007G104000 Sobic007G104000 Sobic003G035332--Sobic007G104000 Sobic003G035332--Sobic004G043400 Sobic003G035332--Sobic007G038432 Sobic002G099401--Sobic003G035332 Sobic002G099401--Sobic001G310166 Sobic002G099401--Sobic010G221700 Sobic002G099401--Sobic009G113200 Sobic002G099401--Sobic007G104000 Sobic002G099401--Sobic004G043400 Sobic002G099401--Sobic007G038432 Sobic007G038432--Sobic003G035332 Sobic007G038432--Sobic002G099401 Sobic007G038432--Sobic005G195700 Sobic007G038432--Sobic007G104000 Sobic007G038432--Sobic010G221700 Sobic007G038432--Sobic004G043400 Sobic007G038432--Sobic001G310166 Sobic001G310166--Sobic002G099401 Sobic001G310166--Sobic003G035332 Sobic001G310166--Sobic010G221700 Sobic001G310166--Sobic009G113200 Sobic001G310166--Sobic007G104000 Sobic001G310166--Sobic007G038432 Sobic001G310166--Sobic005G195700 Sobic003G089801 Sobic003G089801 Sobic009G113200--Sobic003G089801 Sobic009G113200--Sobic003G035332 Sobic004G180800 Sobic004G180800 Sobic009G113200--Sobic004G180800 Sobic009G113200--Sobic002G099401 Sobic009G113200--Sobic001G310166 Sobic009G161350 Sobic009G161350 Sobic009G113200--Sobic009G161350 Sobic009G113200--Sobic010G221700 Sobic002G065500 Sobic002G065500 Sobic002G065600--Sobic002G065500 Sobic008G182400 Sobic008G182400 Sobic002G065600--Sobic008G182400 Sobic002G065800 Sobic002G065800 Sobic002G065600--Sobic002G065800 Sobic002G065700 Sobic002G065700 Sobic002G065600--Sobic002G065700 Sobic005G126100 Sobic005G126100 Sobic002G065600--Sobic005G126100 Sobic004G197100 Sobic004G197100 Sobic002G065600--Sobic004G197100 Sobic010G231000 Sobic010G231000 Sobic002G065600--Sobic010G231000 Sobic010G172800 Sobic010G172800 Sobic002G065600--Sobic010G172800 Sobic006G117400 Sobic006G117400 Sobic002G065600--Sobic006G117400
Octagon: transcription factors


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