Gene annotation
Transcriptome id Sobic.005G195700.1
Synonym TSO2, ATTSO2
Functional annotation ribonucleoside-diphosphate reductase small chain, putative, expressed
UniProt A0A1B6PTL1
Pfam PF00268
Panther DB PTHR23409
NCBI CDD -
KEGG Orthology K10808; ribonucleoside-diphosphate reductase subunit M2
Gene Ontology GO:0009186; deoxyribonucleoside diphosphate metabolic process


Orthologs (automatic annotation)
TAIR AT3G27060 : Ferritin/ribonucleotide reductase-like family protein
RAP-DB (Rice) LOC_Os06g03720.1 : ribonucleoside-diphosphate reductase small chain, putative, expressed
MaizeGDB (Corn) Zm00025a042711
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G175700 - -
2 Sobic.010G221700 - -
3 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.002G099401 - -
5 Sobic.007G038432 - -
6 Sobic.003G035332 - -
7 Sobic.003G035332 - -
8 Sobic.003G035332 - -
9 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.001G310166 - -
11 Sobic.001G184400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
12 Sobic.007G045100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.006G020500 3-ketoacyl-CoA synthase 6, putative, expressed K15397: 3-ketoacyl-CoA synthase
14 Sobic.004G164650 - -
15 Sobic.009G113200 cyclase/dehydrase family protein, expressed -
16 Sobic.007G115000 - -
17 Sobic.003G089801 - -
18 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
19 Sobic.002G410200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.008G105500 ureide permease, putative, expressed -


Gene co-expression network
sample Sobic005G195700 Sobic005G195700 Sobic010G175700 Sobic010G175700 Sobic005G195700--Sobic010G175700 Sobic010G221700 Sobic010G221700 Sobic005G195700--Sobic010G221700 Sobic002G285200 Sobic002G285200 Sobic005G195700--Sobic002G285200 Sobic002G099401 Sobic002G099401 Sobic005G195700--Sobic002G099401 Sobic007G038432 Sobic007G038432 Sobic005G195700--Sobic007G038432 Sobic003G035332 Sobic003G035332 Sobic005G195700--Sobic003G035332 Sobic010G091700 Sobic010G091700 Sobic005G195700--Sobic010G091700 Sobic010G175700--Sobic005G195700 Sobic003G089801 Sobic003G089801 Sobic010G175700--Sobic003G089801 Sobic010G175700--Sobic002G285200 Sobic009G113200 Sobic009G113200 Sobic010G175700--Sobic009G113200 Sobic004G180800 Sobic004G180800 Sobic010G175700--Sobic004G180800 Sobic010G175700--Sobic003G035332 Sobic010G175700--Sobic010G221700 Sobic010G221700--Sobic002G099401 Sobic001G310166 Sobic001G310166 Sobic010G221700--Sobic001G310166 Sobic010G221700--Sobic003G035332 Sobic010G221700--Sobic005G195700 Sobic004G043400 Sobic004G043400 Sobic010G221700--Sobic004G043400 Sobic010G221700--Sobic009G113200 Sobic010G221700--Sobic010G175700 Sobic004G076732 Sobic004G076732 Sobic002G285200--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic002G285200--Sobic002G410200 Sobic007G115000 Sobic007G115000 Sobic002G285200--Sobic007G115000 Sobic004G212800 Sobic004G212800 Sobic002G285200--Sobic004G212800 SobicK009900 SobicK009900 Sobic002G285200--SobicK009900 Sobic001G253100 Sobic001G253100 Sobic002G285200--Sobic001G253100 Sobic004G164600 Sobic004G164600 Sobic002G285200--Sobic004G164600 Sobic007G073400 Sobic007G073400 Sobic002G285200--Sobic007G073400 Sobic003G424100 Sobic003G424100 Sobic002G285200--Sobic003G424100 Sobic002G099401--Sobic003G035332 Sobic002G099401--Sobic001G310166 Sobic002G099401--Sobic010G221700 Sobic002G099401--Sobic009G113200 Sobic007G104000 Sobic007G104000 Sobic002G099401--Sobic007G104000 Sobic002G099401--Sobic004G043400 Sobic002G099401--Sobic007G038432 Sobic007G038432--Sobic003G035332 Sobic007G038432--Sobic002G099401 Sobic007G038432--Sobic005G195700 Sobic007G038432--Sobic007G104000 Sobic007G038432--Sobic010G221700 Sobic007G038432--Sobic004G043400 Sobic007G038432--Sobic001G310166 Sobic003G035332--Sobic003G035332 Sobic003G035332--Sobic002G099401 Sobic003G035332--Sobic001G310166 Sobic003G035332--Sobic009G113200 Sobic003G035332--Sobic010G221700 Sobic003G035332--Sobic007G104000 Sobic003G035332--Sobic004G043400 Sobic003G035332--Sobic007G038432 Sobic006G020500 Sobic006G020500 Sobic010G091700--Sobic006G020500 Sobic007G094600 Sobic007G094600 Sobic010G091700--Sobic007G094600 Sobic001G184400 Sobic001G184400 Sobic010G091700--Sobic001G184400 Sobic001G247800 Sobic001G247800 Sobic010G091700--Sobic001G247800 Sobic002G314600 Sobic002G314600 Sobic010G091700--Sobic002G314600 Sobic002G367300 Sobic002G367300 Sobic010G091700--Sobic002G367300 Sobic010G208500 Sobic010G208500 Sobic010G091700--Sobic010G208500 Sobic006G020600 Sobic006G020600 Sobic010G091700--Sobic006G020600 Sobic002G051400 Sobic002G051400 Sobic010G091700--Sobic002G051400
Octagon: transcription factors


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