Gene annotation
Transcriptome id Sobic.007G045100.1
Synonym Sb07g003730
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YGZ7
Pfam PF15054
Panther DB PTHR33528 PTHR33528:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35736 : -
RAP-DB (Rice) LOC_Os08g05970.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G175700 - -
2 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
3 Sobic.007G038432 - -
4 Sobic.003G035332 - -
5 Sobic.003G035332 - -
6 Sobic.003G035332 - -
7 Sobic.002G099401 - -
8 Sobic.010G221700 - -
9 Sobic.001G310166 - -
10 Sobic.009G113200 cyclase/dehydrase family protein, expressed -
11 Sobic.007G104000 Leucine Rich Repeat family protein, expressed -
12 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
13 Sobic.004G080700 - -
14 Sobic.004G043400 DNA binding protein, putative, expressed -
15 Sobic.003G089801 - -
16 Sobic.003G162633 - -
17 Sobic.004G164650 - -
18 Sobic.004G180800 seven in absentia protein family domain containing protein, expressed -
19 Sobic.009G161350 - -
20 Sobic.001G024200 lipase class 3 family protein, putative, expressed -


Gene co-expression network
sample Sobic007G045100 Sobic007G045100 Sobic010G175700 Sobic010G175700 Sobic007G045100--Sobic010G175700 Sobic005G195700 Sobic005G195700 Sobic007G045100--Sobic005G195700 Sobic007G038432 Sobic007G038432 Sobic007G045100--Sobic007G038432 Sobic003G035332 Sobic003G035332 Sobic007G045100--Sobic003G035332 Sobic002G099401 Sobic002G099401 Sobic007G045100--Sobic002G099401 Sobic010G221700 Sobic010G221700 Sobic007G045100--Sobic010G221700 Sobic001G310166 Sobic001G310166 Sobic007G045100--Sobic001G310166 Sobic010G175700--Sobic005G195700 Sobic003G089801 Sobic003G089801 Sobic010G175700--Sobic003G089801 Sobic002G285200 Sobic002G285200 Sobic010G175700--Sobic002G285200 Sobic009G113200 Sobic009G113200 Sobic010G175700--Sobic009G113200 Sobic004G180800 Sobic004G180800 Sobic010G175700--Sobic004G180800 Sobic010G175700--Sobic003G035332 Sobic010G175700--Sobic010G221700 Sobic005G195700--Sobic010G175700 Sobic005G195700--Sobic010G221700 Sobic005G195700--Sobic002G285200 Sobic005G195700--Sobic002G099401 Sobic005G195700--Sobic007G038432 Sobic005G195700--Sobic003G035332 Sobic010G091700 Sobic010G091700 Sobic005G195700--Sobic010G091700 Sobic007G038432--Sobic003G035332 Sobic007G038432--Sobic002G099401 Sobic007G038432--Sobic005G195700 Sobic007G104000 Sobic007G104000 Sobic007G038432--Sobic007G104000 Sobic007G038432--Sobic010G221700 Sobic004G043400 Sobic004G043400 Sobic007G038432--Sobic004G043400 Sobic007G038432--Sobic001G310166 Sobic003G035332--Sobic003G035332 Sobic003G035332--Sobic002G099401 Sobic003G035332--Sobic001G310166 Sobic003G035332--Sobic009G113200 Sobic003G035332--Sobic010G221700 Sobic003G035332--Sobic007G104000 Sobic003G035332--Sobic004G043400 Sobic003G035332--Sobic007G038432 Sobic002G099401--Sobic003G035332 Sobic002G099401--Sobic001G310166 Sobic002G099401--Sobic010G221700 Sobic002G099401--Sobic009G113200 Sobic002G099401--Sobic007G104000 Sobic002G099401--Sobic004G043400 Sobic002G099401--Sobic007G038432 Sobic010G221700--Sobic002G099401 Sobic010G221700--Sobic001G310166 Sobic010G221700--Sobic003G035332 Sobic010G221700--Sobic005G195700 Sobic010G221700--Sobic004G043400 Sobic010G221700--Sobic009G113200 Sobic010G221700--Sobic010G175700 Sobic001G310166--Sobic002G099401 Sobic001G310166--Sobic003G035332 Sobic001G310166--Sobic010G221700 Sobic001G310166--Sobic009G113200 Sobic001G310166--Sobic007G104000 Sobic001G310166--Sobic007G038432 Sobic001G310166--Sobic005G195700
Octagon: transcription factors


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