Gene annotation
Transcriptome id Sobic.009G113200.3,Sobic.009G113200.2
Synonym
Functional annotation cyclase/dehydrase family protein, expressed
UniProt A0A1Z5R294 , A0A1Z5R2V4
Pfam -
Panther DB PTHR33824 PTHR33824:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02475 : Polyketide cyclase/dehydrase and lipid transport superfamily protein
RAP-DB (Rice) LOC_Os01g22510.1 : cyclase/dehydrase family protein, expressed
MaizeGDB (Corn) Zm00025a024391
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G089801 - -
2 Sobic.003G035332 - -
3 Sobic.003G035332 - -
4 Sobic.003G035332 - -
5 Sobic.004G180800 seven in absentia protein family domain containing protein, expressed -
6 Sobic.002G099401 - -
7 Sobic.001G310166 - -
8 Sobic.009G161350 - -
9 Sobic.010G221700 - -
10 Sobic.010G175700 - -
11 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
12 Sobic.007G104000 Leucine Rich Repeat family protein, expressed -
13 Sobic.004G043400 DNA binding protein, putative, expressed -
14 Sobic.007G038432 - -
15 Sobic.005G130800 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.007G045100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G314600 expressed protein -
18 Sobic.006G020500 3-ketoacyl-CoA synthase 6, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.004G161650 - -
20 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic009G113200 Sobic009G113200 Sobic003G089801 Sobic003G089801 Sobic009G113200--Sobic003G089801 Sobic003G035332 Sobic003G035332 Sobic009G113200--Sobic003G035332 Sobic004G180800 Sobic004G180800 Sobic009G113200--Sobic004G180800 Sobic002G099401 Sobic002G099401 Sobic009G113200--Sobic002G099401 Sobic001G310166 Sobic001G310166 Sobic009G113200--Sobic001G310166 Sobic009G161350 Sobic009G161350 Sobic009G113200--Sobic009G161350 Sobic010G221700 Sobic010G221700 Sobic009G113200--Sobic010G221700 Sobic003G089801--Sobic004G180800 Sobic003G089801--Sobic009G113200 Sobic010G175700 Sobic010G175700 Sobic003G089801--Sobic010G175700 Sobic003G089801--Sobic003G035332 Sobic005G130800 Sobic005G130800 Sobic003G089801--Sobic005G130800 Sobic003G089801--Sobic002G099401 Sobic003G089801--Sobic010G221700 Sobic003G035332--Sobic003G035332 Sobic003G035332--Sobic002G099401 Sobic003G035332--Sobic001G310166 Sobic003G035332--Sobic009G113200 Sobic003G035332--Sobic010G221700 Sobic007G104000 Sobic007G104000 Sobic003G035332--Sobic007G104000 Sobic004G043400 Sobic004G043400 Sobic003G035332--Sobic004G043400 Sobic007G038432 Sobic007G038432 Sobic003G035332--Sobic007G038432 Sobic004G180800--Sobic003G089801 Sobic004G180800--Sobic009G113200 Sobic004G180800--Sobic010G175700 Sobic004G180800--Sobic003G035332 Sobic004G180800--Sobic005G130800 Sobic004G180800--Sobic002G099401 Sobic004G180800--Sobic010G221700 Sobic002G099401--Sobic003G035332 Sobic002G099401--Sobic001G310166 Sobic002G099401--Sobic010G221700 Sobic002G099401--Sobic009G113200 Sobic002G099401--Sobic007G104000 Sobic002G099401--Sobic004G043400 Sobic002G099401--Sobic007G038432 Sobic001G310166--Sobic002G099401 Sobic001G310166--Sobic003G035332 Sobic001G310166--Sobic010G221700 Sobic001G310166--Sobic009G113200 Sobic001G310166--Sobic007G104000 Sobic001G310166--Sobic007G038432 Sobic005G195700 Sobic005G195700 Sobic001G310166--Sobic005G195700 Sobic009G161350--Sobic003G035332 Sobic009G161350--Sobic009G113200 Sobic009G161350--Sobic002G099401 Sobic009G161350--Sobic001G310166 Sobic009G161350--Sobic004G180800 Sobic009G161350--Sobic010G221700 Sobic009G161350--Sobic003G089801 Sobic010G221700--Sobic002G099401 Sobic010G221700--Sobic001G310166 Sobic010G221700--Sobic003G035332 Sobic010G221700--Sobic005G195700 Sobic010G221700--Sobic004G043400 Sobic010G221700--Sobic009G113200 Sobic010G221700--Sobic010G175700
Octagon: transcription factors


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