Gene annotation
Transcriptome id Sobic.005G130800.1
Synonym Sb05g019440
Functional annotation membrane associated DUF588 domain containing protein, putative, expressed
UniProt C5Y376
Pfam PF04535
Panther DB PTHR36488 PTHR36488:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g42970.1 : membrane associated DUF588 domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G089801 - -
2 Sobic.002G314600 expressed protein -
3 Sobic.004G180800 seven in absentia protein family domain containing protein, expressed -
4 Sobic.006G020500 3-ketoacyl-CoA synthase 6, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.007G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450 protein, putative, expressed -
6 Sobic.006G020600 3-ketoacyl-CoA synthase 6, putative, expressed -
7 Sobic.009G113200 cyclase/dehydrase family protein, expressed -
8 Sobic.010G175700 - -
9 Sobic.008G124100 - -
10 Sobic.010G221700 - -
11 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.004G161301 - -
14 Sobic.008G105500 ureide permease, putative, expressed -
15 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
16 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
17 Sobic.009G002500 polygalacturonase inhibitor precursor, putative, expressed -
18 Sobic.004G199600 DUF581 domain containing protein, expressed -
19 Sobic.009G231300 drought induced 19 protein, putative, expressed -
20 Sobic.009G064766 - -


Gene co-expression network
sample Sobic005G130800 Sobic005G130800 Sobic003G089801 Sobic003G089801 Sobic005G130800--Sobic003G089801 Sobic002G314600 Sobic002G314600 Sobic005G130800--Sobic002G314600 Sobic004G180800 Sobic004G180800 Sobic005G130800--Sobic004G180800 Sobic006G020500 Sobic006G020500 Sobic005G130800--Sobic006G020500 Sobic007G094600 Sobic007G094600 Sobic005G130800--Sobic007G094600 Sobic006G020600 Sobic006G020600 Sobic005G130800--Sobic006G020600 Sobic009G113200 Sobic009G113200 Sobic005G130800--Sobic009G113200 Sobic010G175700 Sobic010G175700 Sobic005G130800--Sobic010G175700 Sobic008G124100 Sobic008G124100 Sobic005G130800--Sobic008G124100 Sobic003G089801--Sobic004G180800 Sobic003G089801--Sobic009G113200 Sobic003G089801--Sobic010G175700 Sobic003G035332 Sobic003G035332 Sobic003G089801--Sobic003G035332 Sobic003G089801--Sobic005G130800 Sobic002G099401 Sobic002G099401 Sobic003G089801--Sobic002G099401 Sobic010G221700 Sobic010G221700 Sobic003G089801--Sobic010G221700 Sobic002G314600--Sobic006G020500 Sobic002G314600--Sobic007G094600 Sobic002G314600--Sobic006G020600 Sobic010G091700 Sobic010G091700 Sobic002G314600--Sobic010G091700 Sobic002G314600--Sobic008G124100 Sobic002G051400 Sobic002G051400 Sobic002G314600--Sobic002G051400 Sobic002G314600--Sobic005G130800 Sobic002G314600--Sobic003G089801 Sobic009G109450 Sobic009G109450 Sobic002G314600--Sobic009G109450 Sobic004G180800--Sobic003G089801 Sobic004G180800--Sobic009G113200 Sobic004G180800--Sobic010G175700 Sobic004G180800--Sobic003G035332 Sobic004G180800--Sobic005G130800 Sobic004G180800--Sobic002G099401 Sobic004G180800--Sobic010G221700 Sobic006G020500--Sobic007G094600 Sobic006G020500--Sobic006G020600 Sobic006G020500--Sobic002G314600 Sobic006G020500--Sobic002G051400 Sobic006G020500--Sobic010G091700 Sobic008G105500 Sobic008G105500 Sobic006G020500--Sobic008G105500 Sobic006G020500--Sobic009G109450 Sobic009G231300 Sobic009G231300 Sobic006G020500--Sobic009G231300 Sobic009G078500 Sobic009G078500 Sobic006G020500--Sobic009G078500 Sobic007G094600--Sobic006G020500 Sobic007G094600--Sobic006G020600 Sobic007G094600--Sobic002G314600 Sobic007G094600--Sobic002G051400 Sobic007G094600--Sobic010G091700 Sobic007G094600--Sobic009G078500 Sobic007G094600--Sobic008G124100 Sobic003G422000 Sobic003G422000 Sobic007G094600--Sobic003G422000 Sobic008G108900 Sobic008G108900 Sobic007G094600--Sobic008G108900 Sobic006G020600--Sobic007G094600 Sobic006G020600--Sobic006G020500 Sobic006G020600--Sobic002G051400 Sobic006G020600--Sobic008G124100 Sobic010G146200 Sobic010G146200 Sobic006G020600--Sobic010G146200 Sobic006G020600--Sobic002G314600 Sobic006G020600--Sobic009G078500 Sobic006G020600--Sobic009G231300 Sobic003G176100 Sobic003G176100 Sobic006G020600--Sobic003G176100 Sobic009G113200--Sobic003G089801 Sobic009G113200--Sobic003G035332 Sobic009G113200--Sobic004G180800 Sobic009G113200--Sobic002G099401 Sobic001G310166 Sobic001G310166 Sobic009G113200--Sobic001G310166 Sobic009G161350 Sobic009G161350 Sobic009G113200--Sobic009G161350 Sobic009G113200--Sobic010G221700 Sobic005G195700 Sobic005G195700 Sobic010G175700--Sobic005G195700 Sobic010G175700--Sobic003G089801 Sobic002G285200 Sobic002G285200 Sobic010G175700--Sobic002G285200 Sobic010G175700--Sobic009G113200 Sobic010G175700--Sobic004G180800 Sobic010G175700--Sobic003G035332 Sobic010G175700--Sobic010G221700 Sobic001G277000 Sobic001G277000 Sobic008G124100--Sobic001G277000 Sobic009G064766 Sobic009G064766 Sobic008G124100--Sobic009G064766 Sobic008G013900 Sobic008G013900 Sobic008G124100--Sobic008G013900 Sobic007G189800 Sobic007G189800 Sobic008G124100--Sobic007G189800 Sobic008G124100--Sobic003G176100 Sobic008G124100--Sobic010G146200 Sobic008G124100--Sobic006G020600 Sobic008G124100--Sobic002G051400 Sobic001G164200 Sobic001G164200 Sobic008G124100--Sobic001G164200
Octagon: transcription factors


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