Gene annotation
Transcriptome id Sobic.001G184400.1
Synonym SbSAUR4, small auxin up RNA, Sb01g016020
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR55 - Auxin-responsive SAUR gene family member, expressed
UniProt C5WUB5
Pfam PF02519
Panther DB PTHR31175
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT5G27780 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37500.1 : OsSAUR55 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G049000 frigida, putative, expressed -
2 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
4 Sobic.002G090400 polygalacturonase, putative, expressed -
5 Sobic.010G208500 - -
6 Sobic.002G297800 growth regulating factor protein, putative, expressed -
7 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
8 Sobic.001G393401 - -
9 Sobic.001G422366 - -
10 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
11 Sobic.002G285200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
12 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
13 Sobic.008G068800 cytokinin inducible protein, putative, expressed -
14 Sobic.007G099500 hypothetical protein -
15 Sobic.009G059600 KIP1, putative, expressed -
16 Sobic.003G023400 SCAR-like protein 2, putative, expressed -
17 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
18 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
19 Sobic.003G380500 expressed protein -
20 Sobic.002G316000 expressed protein -


Gene co-expression network
sample Sobic001G184400 Sobic001G184400 Sobic002G049000 Sobic002G049000 Sobic001G184400--Sobic002G049000 Sobic010G091700 Sobic010G091700 Sobic001G184400--Sobic010G091700 Sobic002G367300 Sobic002G367300 Sobic001G184400--Sobic002G367300 Sobic002G090400 Sobic002G090400 Sobic001G184400--Sobic002G090400 Sobic010G208500 Sobic010G208500 Sobic001G184400--Sobic010G208500 Sobic002G297800 Sobic002G297800 Sobic001G184400--Sobic002G297800 Sobic005G195700 Sobic005G195700 Sobic001G184400--Sobic005G195700 Sobic001G393401 Sobic001G393401 Sobic001G184400--Sobic001G393401 Sobic001G422366 Sobic001G422366 Sobic001G184400--Sobic001G422366 Sobic003G346000 Sobic003G346000 Sobic002G049000--Sobic003G346000 Sobic002G049000--Sobic002G297800 Sobic002G049000--Sobic002G090400 Sobic008G068800 Sobic008G068800 Sobic002G049000--Sobic008G068800 Sobic007G011400 Sobic007G011400 Sobic002G049000--Sobic007G011400 Sobic002G061400 Sobic002G061400 Sobic002G049000--Sobic002G061400 Sobic001G094000 Sobic001G094000 Sobic002G049000--Sobic001G094000 Sobic008G034600 Sobic008G034600 Sobic002G049000--Sobic008G034600 Sobic001G394400 Sobic001G394400 Sobic002G049000--Sobic001G394400 Sobic006G020500 Sobic006G020500 Sobic010G091700--Sobic006G020500 Sobic007G094600 Sobic007G094600 Sobic010G091700--Sobic007G094600 Sobic010G091700--Sobic001G184400 Sobic001G247800 Sobic001G247800 Sobic010G091700--Sobic001G247800 Sobic002G314600 Sobic002G314600 Sobic010G091700--Sobic002G314600 Sobic010G091700--Sobic002G367300 Sobic010G091700--Sobic010G208500 Sobic006G020600 Sobic006G020600 Sobic010G091700--Sobic006G020600 Sobic002G051400 Sobic002G051400 Sobic010G091700--Sobic002G051400 Sobic006G262600 Sobic006G262600 Sobic002G367300--Sobic006G262600 Sobic002G367300--Sobic010G091700 Sobic002G367300--Sobic001G184400 Sobic009G011500 Sobic009G011500 Sobic002G367300--Sobic009G011500 Sobic003G380500 Sobic003G380500 Sobic002G367300--Sobic003G380500 Sobic004G154600 Sobic004G154600 Sobic002G367300--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic002G367300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G367300--Sobic003G174900 Sobic004G205500 Sobic004G205500 Sobic002G367300--Sobic004G205500 Sobic007G099500 Sobic007G099500 Sobic002G090400--Sobic007G099500 Sobic002G090400--Sobic002G049000 Sobic002G090400--Sobic008G068800 Sobic004G169501 Sobic004G169501 Sobic002G090400--Sobic004G169501 Sobic004G143700 Sobic004G143700 Sobic002G090400--Sobic004G143700 Sobic009G059600 Sobic009G059600 Sobic002G090400--Sobic009G059600 Sobic003G424100 Sobic003G424100 Sobic002G090400--Sobic003G424100 Sobic007G073400 Sobic007G073400 Sobic002G090400--Sobic007G073400 Sobic006G145000 Sobic006G145000 Sobic002G090400--Sobic006G145000 Sobic006G132200 Sobic006G132200 Sobic010G208500--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic010G208500--Sobic008G108900 Sobic010G208500--Sobic003G424100 Sobic002G062300 Sobic002G062300 Sobic010G208500--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic010G208500--Sobic005G212600 Sobic009G109101 Sobic009G109101 Sobic010G208500--Sobic009G109101 Sobic009G196700 Sobic009G196700 Sobic010G208500--Sobic009G196700 Sobic009G113600 Sobic009G113600 Sobic010G208500--Sobic009G113600 Sobic007G115000 Sobic007G115000 Sobic010G208500--Sobic007G115000 Sobic002G297800--Sobic002G049000 Sobic003G204000 Sobic003G204000 Sobic002G297800--Sobic003G204000 Sobic002G297800--Sobic002G061400 Sobic002G297800--Sobic008G068800 Sobic009G231300 Sobic009G231300 Sobic002G297800--Sobic009G231300 Sobic009G257300 Sobic009G257300 Sobic002G297800--Sobic009G257300 Sobic004G212800 Sobic004G212800 Sobic002G297800--Sobic004G212800 Sobic002G313300 Sobic002G313300 Sobic002G297800--Sobic002G313300 Sobic002G297800--Sobic009G059600 Sobic010G175700 Sobic010G175700 Sobic005G195700--Sobic010G175700 Sobic010G221700 Sobic010G221700 Sobic005G195700--Sobic010G221700 Sobic002G285200 Sobic002G285200 Sobic005G195700--Sobic002G285200 Sobic002G099401 Sobic002G099401 Sobic005G195700--Sobic002G099401 Sobic007G038432 Sobic007G038432 Sobic005G195700--Sobic007G038432 Sobic003G035332 Sobic003G035332 Sobic005G195700--Sobic003G035332 Sobic005G195700--Sobic010G091700 Sobic003G023400 Sobic003G023400 Sobic001G393401--Sobic003G023400 Sobic001G384700 Sobic001G384700 Sobic001G393401--Sobic001G384700 Sobic002G216600 Sobic002G216600 Sobic001G393401--Sobic002G216600 Sobic002G060450 Sobic002G060450 Sobic001G393401--Sobic002G060450 Sobic010G190400 Sobic010G190400 Sobic001G393401--Sobic010G190400 Sobic005G204100 Sobic005G204100 Sobic001G393401--Sobic005G204100 Sobic001G393401--Sobic001G184400 Sobic001G393401--Sobic002G049000 Sobic004G052800 Sobic004G052800 Sobic001G393401--Sobic004G052800 Sobic001G422366--Sobic009G059600 Sobic001G422366--Sobic004G212800 Sobic001G422366--Sobic009G231300 Sobic001G422366--Sobic007G073400 Sobic001G422366--Sobic002G051400 Sobic001G046600 Sobic001G046600 Sobic001G422366--Sobic001G046600 Sobic008G167300 Sobic008G167300 Sobic001G422366--Sobic008G167300 Sobic004G076732 Sobic004G076732 Sobic001G422366--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic001G422366--Sobic002G410200
Octagon: transcription factors


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