Gene annotation
Transcriptome id Sobic.003G380500.1,Sobic.003G380500.2
Synonym Sb03g042020
Functional annotation expressed protein
UniProt A0A1B6Q7E8 , C5XEM8
Pfam -
Panther DB PTHR31358 PTHR31358:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24160 : -
RAP-DB (Rice) LOC_Os01g66200.1 : expressed protein
MaizeGDB (Corn) Zm00025a026528
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G380500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G262600 expressed protein -
2 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.001G179000 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
4 Sobic.002G221700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
5 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
6 Sobic.009G164900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
7 Sobic.004G250700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
8 Sobic.007G195400 FHA domain containing protein, putative, expressed -
9 Sobic.007G008800 VHS and GAT domain containing protein, expressed -
10 Sobic.005G162600 zinc knuckle domain containing protein, expressed -
11 Sobic.002G221900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Decreased expression in phyB-1 mutant(PubMedID : 26893475)@1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
12 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
13 Sobic.009G059600 KIP1, putative, expressed -
14 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
15 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
16 Sobic.009G183500 expressed protein -
17 Sobic.002G177400 expressed protein -
18 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
19 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
20 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA


Gene co-expression network
sample Sobic003G380500 Sobic003G380500 Sobic006G262600 Sobic006G262600 Sobic003G380500--Sobic006G262600 Sobic002G007200 Sobic002G007200 Sobic003G380500--Sobic002G007200 Sobic001G179000 Sobic001G179000 Sobic003G380500--Sobic001G179000 Sobic002G221700 Sobic002G221700 Sobic003G380500--Sobic002G221700 Sobic007G191100 Sobic007G191100 Sobic003G380500--Sobic007G191100 Sobic009G164900 Sobic009G164900 Sobic003G380500--Sobic009G164900 Sobic004G250700 Sobic004G250700 Sobic003G380500--Sobic004G250700 Sobic007G195400 Sobic007G195400 Sobic003G380500--Sobic007G195400 Sobic007G008800 Sobic007G008800 Sobic003G380500--Sobic007G008800 Sobic006G262600--Sobic002G007200 Sobic006G262600--Sobic003G380500 Sobic006G133600 Sobic006G133600 Sobic006G262600--Sobic006G133600 Sobic002G367300 Sobic002G367300 Sobic006G262600--Sobic002G367300 Sobic001G049600 Sobic001G049600 Sobic006G262600--Sobic001G049600 Sobic004G154600 Sobic004G154600 Sobic006G262600--Sobic004G154600 Sobic002G250400 Sobic002G250400 Sobic006G262600--Sobic002G250400 Sobic006G262600--Sobic004G250700 Sobic009G059600 Sobic009G059600 Sobic006G262600--Sobic009G059600 Sobic002G007200--Sobic006G262600 Sobic002G007200--Sobic003G380500 Sobic002G007200--Sobic009G164900 Sobic002G007200--Sobic006G133600 Sobic002G334600 Sobic002G334600 Sobic002G007200--Sobic002G334600 Sobic009G064900 Sobic009G064900 Sobic002G007200--Sobic009G064900 Sobic002G007200--Sobic002G367300 Sobic004G287800 Sobic004G287800 Sobic002G007200--Sobic004G287800 Sobic004G205500 Sobic004G205500 Sobic002G007200--Sobic004G205500 Sobic007G224900 Sobic007G224900 Sobic001G179000--Sobic007G224900 Sobic001G179000--Sobic003G380500 Sobic006G149101 Sobic006G149101 Sobic001G179000--Sobic006G149101 Sobic001G179000--Sobic007G195400 Sobic004G349100 Sobic004G349100 Sobic001G179000--Sobic004G349100 Sobic009G183500 Sobic009G183500 Sobic001G179000--Sobic009G183500 Sobic003G074000 Sobic003G074000 Sobic001G179000--Sobic003G074000 Sobic002G221900 Sobic002G221900 Sobic001G179000--Sobic002G221900 Sobic007G023700 Sobic007G023700 Sobic001G179000--Sobic007G023700 Sobic004G164600 Sobic004G164600 Sobic002G221700--Sobic004G164600 Sobic008G042250 Sobic008G042250 Sobic002G221700--Sobic008G042250 Sobic001G253100 Sobic001G253100 Sobic002G221700--Sobic001G253100 Sobic005G110430 Sobic005G110430 Sobic002G221700--Sobic005G110430 Sobic004G076732 Sobic004G076732 Sobic002G221700--Sobic004G076732 Sobic008G009500 Sobic008G009500 Sobic002G221700--Sobic008G009500 Sobic007G073400 Sobic007G073400 Sobic002G221700--Sobic007G073400 Sobic008G157950 Sobic008G157950 Sobic002G221700--Sobic008G157950 Sobic004G212800 Sobic004G212800 Sobic002G221700--Sobic004G212800 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic002G076400 Sobic002G076400 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic010G263800 Sobic010G263800 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic009G164900--Sobic002G007200 Sobic009G164900--Sobic003G380500 Sobic001G216600 Sobic001G216600 Sobic009G164900--Sobic001G216600 Sobic003G356200 Sobic003G356200 Sobic009G164900--Sobic003G356200 Sobic001G217100 Sobic001G217100 Sobic009G164900--Sobic001G217100 Sobic004G229100 Sobic004G229100 Sobic009G164900--Sobic004G229100 Sobic009G011500 Sobic009G011500 Sobic009G164900--Sobic009G011500 Sobic009G164900--Sobic007G195400 Sobic002G157200 Sobic002G157200 Sobic009G164900--Sobic002G157200 Sobic004G250700--Sobic003G380500 Sobic004G250700--Sobic007G191100 Sobic004G250700--Sobic001G049600 Sobic004G250700--Sobic006G262600 Sobic004G198000 Sobic004G198000 Sobic004G250700--Sobic004G198000 Sobic004G250700--Sobic004G061900 Sobic005G167300 Sobic005G167300 Sobic004G250700--Sobic005G167300 Sobic001G028400 Sobic001G028400 Sobic004G250700--Sobic001G028400 Sobic004G250700--Sobic010G077600 Sobic003G359300 Sobic003G359300 Sobic007G195400--Sobic003G359300 Sobic007G195400--Sobic004G061900 Sobic007G195400--Sobic008G034600 Sobic007G195400--Sobic007G191100 Sobic006G129700 Sobic006G129700 Sobic007G195400--Sobic006G129700 Sobic007G195400--Sobic003G093600 Sobic007G195400--Sobic001G216600 Sobic002G058300 Sobic002G058300 Sobic007G195400--Sobic002G058300 Sobic003G115100 Sobic003G115100 Sobic007G195400--Sobic003G115100 Sobic003G026300 Sobic003G026300 Sobic007G008800--Sobic003G026300 Sobic004G088400 Sobic004G088400 Sobic007G008800--Sobic004G088400 SobicK009900 SobicK009900 Sobic007G008800--SobicK009900 Sobic002G177400 Sobic002G177400 Sobic007G008800--Sobic002G177400 Sobic007G008800--Sobic004G076732 Sobic002G410200 Sobic002G410200 Sobic007G008800--Sobic002G410200 Sobic001G024200 Sobic001G024200 Sobic007G008800--Sobic001G024200 Sobic005G139800 Sobic005G139800 Sobic007G008800--Sobic005G139800 Sobic001G271801 Sobic001G271801 Sobic007G008800--Sobic001G271801
Octagon: transcription factors


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