Gene annotation
Transcriptome id Sobic.002G007200.1
Synonym AtENODL20, Sb02g000840, ENODL20
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5X780
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G27035 : early nodulin-like protein 20
RAP-DB (Rice) LOC_Os07g02200.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a044873
Brachypodium KQK21173
Barley HORVU2Hr1G063510.1 , HORVU2Hr1G063510.2
Wheat TraesCS2B02G279700 , TraesCS2A02G262400 , TraesCS2D02G261600
Populus -


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cDNA sequences
Sobic.002G007200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G262600 expressed protein -
2 Sobic.003G380500 expressed protein -
3 Sobic.009G164900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
4 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
5 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
6 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
7 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
8 Sobic.004G287800 expressed protein -
9 Sobic.004G205500 expressed protein -
10 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
11 Sobic.008G086200 expressed protein -
12 Sobic.001G179000 DNA-directed RNA polymerase subunit, putative, expressed K03014: RPB6, DNA-directed RNA polymerases I, II, and III subunit RPABC2
13 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
14 Sobic.002G250400 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
15 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
16 Sobic.004G154600 expressed protein -
17 Sobic.001G019200 H-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
18 Sobic.002G177400 expressed protein -
19 Sobic.004G229100 OsFBX61 - F-box domain containing protein, expressed -
20 Sobic.010G163900 BES1/BZR1 homolog protein, putative, expressed -


Gene co-expression network
sample Sobic002G007200 Sobic002G007200 Sobic006G262600 Sobic006G262600 Sobic002G007200--Sobic006G262600 Sobic003G380500 Sobic003G380500 Sobic002G007200--Sobic003G380500 Sobic009G164900 Sobic009G164900 Sobic002G007200--Sobic009G164900 Sobic006G133600 Sobic006G133600 Sobic002G007200--Sobic006G133600 Sobic002G334600 Sobic002G334600 Sobic002G007200--Sobic002G334600 Sobic009G064900 Sobic009G064900 Sobic002G007200--Sobic009G064900 Sobic002G367300 Sobic002G367300 Sobic002G007200--Sobic002G367300 Sobic004G287800 Sobic004G287800 Sobic002G007200--Sobic004G287800 Sobic004G205500 Sobic004G205500 Sobic002G007200--Sobic004G205500 Sobic006G262600--Sobic002G007200 Sobic006G262600--Sobic003G380500 Sobic006G262600--Sobic006G133600 Sobic006G262600--Sobic002G367300 Sobic001G049600 Sobic001G049600 Sobic006G262600--Sobic001G049600 Sobic004G154600 Sobic004G154600 Sobic006G262600--Sobic004G154600 Sobic002G250400 Sobic002G250400 Sobic006G262600--Sobic002G250400 Sobic004G250700 Sobic004G250700 Sobic006G262600--Sobic004G250700 Sobic009G059600 Sobic009G059600 Sobic006G262600--Sobic009G059600 Sobic003G380500--Sobic006G262600 Sobic003G380500--Sobic002G007200 Sobic001G179000 Sobic001G179000 Sobic003G380500--Sobic001G179000 Sobic002G221700 Sobic002G221700 Sobic003G380500--Sobic002G221700 Sobic007G191100 Sobic007G191100 Sobic003G380500--Sobic007G191100 Sobic003G380500--Sobic009G164900 Sobic003G380500--Sobic004G250700 Sobic007G195400 Sobic007G195400 Sobic003G380500--Sobic007G195400 Sobic007G008800 Sobic007G008800 Sobic003G380500--Sobic007G008800 Sobic009G164900--Sobic002G007200 Sobic009G164900--Sobic003G380500 Sobic001G216600 Sobic001G216600 Sobic009G164900--Sobic001G216600 Sobic003G356200 Sobic003G356200 Sobic009G164900--Sobic003G356200 Sobic001G217100 Sobic001G217100 Sobic009G164900--Sobic001G217100 Sobic004G229100 Sobic004G229100 Sobic009G164900--Sobic004G229100 Sobic009G011500 Sobic009G011500 Sobic009G164900--Sobic009G011500 Sobic009G164900--Sobic007G195400 Sobic002G157200 Sobic002G157200 Sobic009G164900--Sobic002G157200 Sobic004G240900 Sobic004G240900 Sobic006G133600--Sobic004G240900 Sobic006G133600--Sobic006G262600 Sobic006G213100 Sobic006G213100 Sobic006G133600--Sobic006G213100 Sobic003G044900 Sobic003G044900 Sobic006G133600--Sobic003G044900 Sobic009G214600 Sobic009G214600 Sobic006G133600--Sobic009G214600 Sobic007G099500 Sobic007G099500 Sobic006G133600--Sobic007G099500 Sobic001G024200 Sobic001G024200 Sobic006G133600--Sobic001G024200 Sobic006G133600--Sobic009G059600 Sobic006G133600--Sobic002G221700 Sobic002G223300 Sobic002G223300 Sobic002G334600--Sobic002G223300 Sobic009G030300 Sobic009G030300 Sobic002G334600--Sobic009G030300 Sobic007G139400 Sobic007G139400 Sobic002G334600--Sobic007G139400 Sobic007G188900 Sobic007G188900 Sobic002G334600--Sobic007G188900 Sobic003G132700 Sobic003G132700 Sobic002G334600--Sobic003G132700 Sobic002G089900 Sobic002G089900 Sobic002G334600--Sobic002G089900 Sobic003G354100 Sobic003G354100 Sobic002G334600--Sobic003G354100 Sobic009G044900 Sobic009G044900 Sobic002G334600--Sobic009G044900 Sobic002G334600--Sobic002G157200 Sobic001G113800 Sobic001G113800 Sobic009G064900--Sobic001G113800 Sobic001G487200 Sobic001G487200 Sobic009G064900--Sobic001G487200 Sobic001G157100 Sobic001G157100 Sobic009G064900--Sobic001G157100 Sobic009G064900--Sobic002G007200 Sobic001G372900 Sobic001G372900 Sobic009G064900--Sobic001G372900 Sobic007G210900 Sobic007G210900 Sobic009G064900--Sobic007G210900 Sobic008G086200 Sobic008G086200 Sobic009G064900--Sobic008G086200 Sobic010G046400 Sobic010G046400 Sobic009G064900--Sobic010G046400 Sobic003G174900 Sobic003G174900 Sobic009G064900--Sobic003G174900 Sobic002G367300--Sobic006G262600 Sobic010G091700 Sobic010G091700 Sobic002G367300--Sobic010G091700 Sobic001G184400 Sobic001G184400 Sobic002G367300--Sobic001G184400 Sobic002G367300--Sobic009G011500 Sobic002G367300--Sobic003G380500 Sobic002G367300--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic002G367300--Sobic004G199700 Sobic002G367300--Sobic003G174900 Sobic002G367300--Sobic004G205500 Sobic004G308100 Sobic004G308100 Sobic004G287800--Sobic004G308100 Sobic007G132900 Sobic007G132900 Sobic004G287800--Sobic007G132900 Sobic004G287800--Sobic002G007200 Sobic008G035900 Sobic008G035900 Sobic004G287800--Sobic008G035900 Sobic006G254500 Sobic006G254500 Sobic004G287800--Sobic006G254500 Sobic002G353200 Sobic002G353200 Sobic004G287800--Sobic002G353200 Sobic009G123500 Sobic009G123500 Sobic004G287800--Sobic009G123500 Sobic004G287800--Sobic009G064900 Sobic004G331200 Sobic004G331200 Sobic004G287800--Sobic004G331200 Sobic004G205500--Sobic004G154600 Sobic004G205500--Sobic004G199700 Sobic004G205500--Sobic003G174900 Sobic003G420201 Sobic003G420201 Sobic004G205500--Sobic003G420201 Sobic004G205500--Sobic007G210900 Sobic004G205500--Sobic002G367300 Sobic002G348700 Sobic002G348700 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic004G205500--Sobic008G086200
Octagon: transcription factors


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