Gene annotation
Transcriptome id Sobic.006G262600.1,Sobic.006G262600.2
Synonym Sb06g032540
Functional annotation expressed protein
UniProt C5YA57
Pfam -
Panther DB PTHR34064 PTHR34064:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39900 : -
RAP-DB (Rice) LOC_Os04g57650.1 : expressed protein
MaizeGDB (Corn) Zm00025a009352 , Zm00025a057357
Brachypodium KQJ85239
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G007200 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G380500 expressed protein -
3 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
4 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
5 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
6 Sobic.004G154600 expressed protein -
7 Sobic.002G250400 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
8 Sobic.004G250700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
9 Sobic.009G059600 KIP1, putative, expressed -
10 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
11 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
12 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
13 Sobic.006G149101 - -
14 Sobic.007G099500 hypothetical protein -
15 Sobic.002G221700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
16 Sobic.010G163900 BES1/BZR1 homolog protein, putative, expressed -
17 Sobic.004G242700 heat shock protein DnaJ, putative, expressed -
18 Sobic.009G164900 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
19 Sobic.003G044900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
20 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein


Gene co-expression network
sample Sobic006G262600 Sobic006G262600 Sobic002G007200 Sobic002G007200 Sobic006G262600--Sobic002G007200 Sobic003G380500 Sobic003G380500 Sobic006G262600--Sobic003G380500 Sobic006G133600 Sobic006G133600 Sobic006G262600--Sobic006G133600 Sobic002G367300 Sobic002G367300 Sobic006G262600--Sobic002G367300 Sobic001G049600 Sobic001G049600 Sobic006G262600--Sobic001G049600 Sobic004G154600 Sobic004G154600 Sobic006G262600--Sobic004G154600 Sobic002G250400 Sobic002G250400 Sobic006G262600--Sobic002G250400 Sobic004G250700 Sobic004G250700 Sobic006G262600--Sobic004G250700 Sobic009G059600 Sobic009G059600 Sobic006G262600--Sobic009G059600 Sobic002G007200--Sobic006G262600 Sobic002G007200--Sobic003G380500 Sobic009G164900 Sobic009G164900 Sobic002G007200--Sobic009G164900 Sobic002G007200--Sobic006G133600 Sobic002G334600 Sobic002G334600 Sobic002G007200--Sobic002G334600 Sobic009G064900 Sobic009G064900 Sobic002G007200--Sobic009G064900 Sobic002G007200--Sobic002G367300 Sobic004G287800 Sobic004G287800 Sobic002G007200--Sobic004G287800 Sobic004G205500 Sobic004G205500 Sobic002G007200--Sobic004G205500 Sobic003G380500--Sobic006G262600 Sobic003G380500--Sobic002G007200 Sobic001G179000 Sobic001G179000 Sobic003G380500--Sobic001G179000 Sobic002G221700 Sobic002G221700 Sobic003G380500--Sobic002G221700 Sobic007G191100 Sobic007G191100 Sobic003G380500--Sobic007G191100 Sobic003G380500--Sobic009G164900 Sobic003G380500--Sobic004G250700 Sobic007G195400 Sobic007G195400 Sobic003G380500--Sobic007G195400 Sobic007G008800 Sobic007G008800 Sobic003G380500--Sobic007G008800 Sobic004G240900 Sobic004G240900 Sobic006G133600--Sobic004G240900 Sobic006G133600--Sobic006G262600 Sobic006G213100 Sobic006G213100 Sobic006G133600--Sobic006G213100 Sobic003G044900 Sobic003G044900 Sobic006G133600--Sobic003G044900 Sobic009G214600 Sobic009G214600 Sobic006G133600--Sobic009G214600 Sobic007G099500 Sobic007G099500 Sobic006G133600--Sobic007G099500 Sobic001G024200 Sobic001G024200 Sobic006G133600--Sobic001G024200 Sobic006G133600--Sobic009G059600 Sobic006G133600--Sobic002G221700 Sobic002G367300--Sobic006G262600 Sobic010G091700 Sobic010G091700 Sobic002G367300--Sobic010G091700 Sobic001G184400 Sobic001G184400 Sobic002G367300--Sobic001G184400 Sobic009G011500 Sobic009G011500 Sobic002G367300--Sobic009G011500 Sobic002G367300--Sobic003G380500 Sobic002G367300--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic002G367300--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic002G367300--Sobic003G174900 Sobic002G367300--Sobic004G205500 Sobic004G061900 Sobic004G061900 Sobic001G049600--Sobic004G061900 Sobic004G242700 Sobic004G242700 Sobic001G049600--Sobic004G242700 Sobic002G033600 Sobic002G033600 Sobic001G049600--Sobic002G033600 Sobic002G076400 Sobic002G076400 Sobic001G049600--Sobic002G076400 Sobic007G188900 Sobic007G188900 Sobic001G049600--Sobic007G188900 Sobic001G049600--Sobic007G191100 Sobic006G092800 Sobic006G092800 Sobic001G049600--Sobic006G092800 Sobic004G030700 Sobic004G030700 Sobic001G049600--Sobic004G030700 Sobic001G049600--Sobic006G262600 Sobic009G259500 Sobic009G259500 Sobic004G154600--Sobic009G259500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic007G210900 Sobic007G210900 Sobic004G154600--Sobic007G210900 Sobic004G154600--Sobic004G199700 Sobic002G072700 Sobic002G072700 Sobic004G154600--Sobic002G072700 Sobic004G154600--Sobic003G174900 Sobic004G154600--Sobic002G367300 Sobic004G154600--Sobic006G262600 Sobic002G250400--Sobic006G262600 Sobic002G250400--Sobic001G049600 Sobic002G250400--Sobic007G191100 Sobic004G083200 Sobic004G083200 Sobic002G250400--Sobic004G083200 Sobic002G250400--Sobic002G334600 Sobic009G030300 Sobic009G030300 Sobic002G250400--Sobic009G030300 Sobic002G250400--Sobic003G380500 Sobic003G328800 Sobic003G328800 Sobic002G250400--Sobic003G328800 Sobic002G250400--Sobic002G007200 Sobic004G250700--Sobic003G380500 Sobic004G250700--Sobic007G191100 Sobic004G250700--Sobic001G049600 Sobic004G250700--Sobic006G262600 Sobic004G198000 Sobic004G198000 Sobic004G250700--Sobic004G198000 Sobic004G250700--Sobic004G061900 Sobic005G167300 Sobic005G167300 Sobic004G250700--Sobic005G167300 Sobic001G028400 Sobic001G028400 Sobic004G250700--Sobic001G028400 Sobic010G077600 Sobic010G077600 Sobic004G250700--Sobic010G077600 Sobic004G164600 Sobic004G164600 Sobic009G059600--Sobic004G164600 Sobic009G059600--Sobic007G099500 Sobic004G212800 Sobic004G212800 Sobic009G059600--Sobic004G212800 Sobic007G073400 Sobic007G073400 Sobic009G059600--Sobic007G073400 Sobic008G068800 Sobic008G068800 Sobic009G059600--Sobic008G068800 Sobic003G128600 Sobic003G128600 Sobic009G059600--Sobic003G128600 Sobic003G424100 Sobic003G424100 Sobic009G059600--Sobic003G424100 Sobic007G142050 Sobic007G142050 Sobic009G059600--Sobic007G142050 Sobic004G076732 Sobic004G076732 Sobic009G059600--Sobic004G076732
Octagon: transcription factors


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