Gene annotation
Transcriptome id Sobic.004G154600.1
Synonym Sb04g020590
Functional annotation expressed protein
UniProt C5XSL2
Pfam -
Panther DB PTHR34946
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48550 : -
RAP-DB (Rice) LOC_Os02g30380.1 : expressed protein
MaizeGDB (Corn) Zm00025a020397 , Zm00025a011783
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.004G205500 expressed protein -
3 Sobic.004G259101 - -
4 Sobic.007G210900 expressed protein -
5 Sobic.004G199700 expressed protein -
6 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
7 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
8 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
9 Sobic.006G262600 expressed protein -
10 Sobic.006G248300 "Lypoxygenase, probably induced by oxidative stress, up-regulated under severe drought stress"(PubMedID : 24655390)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
11 Sobic.002G316000 expressed protein -
12 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
13 Sobic.008G086200 expressed protein -
14 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
15 Sobic.009G175200 expressed protein -
16 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
17 Sobic.007G099500 hypothetical protein -
18 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
19 Sobic.003G038000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
20 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)


Gene co-expression network
sample Sobic004G154600 Sobic004G154600 Sobic009G259500 Sobic009G259500 Sobic004G154600--Sobic009G259500 Sobic004G205500 Sobic004G205500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic007G210900 Sobic007G210900 Sobic004G154600--Sobic007G210900 Sobic004G199700 Sobic004G199700 Sobic004G154600--Sobic004G199700 Sobic002G072700 Sobic002G072700 Sobic004G154600--Sobic002G072700 Sobic003G174900 Sobic003G174900 Sobic004G154600--Sobic003G174900 Sobic002G367300 Sobic002G367300 Sobic004G154600--Sobic002G367300 Sobic006G262600 Sobic006G262600 Sobic004G154600--Sobic006G262600 Sobic005G204100 Sobic005G204100 Sobic009G259500--Sobic005G204100 Sobic002G216600 Sobic002G216600 Sobic009G259500--Sobic002G216600 Sobic009G259500--Sobic004G154600 Sobic009G259500--Sobic002G072700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic001G258100 Sobic001G258100 Sobic009G259500--Sobic001G258100 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic004G205500--Sobic004G154600 Sobic004G205500--Sobic004G199700 Sobic004G205500--Sobic003G174900 Sobic003G420201 Sobic003G420201 Sobic004G205500--Sobic003G420201 Sobic004G205500--Sobic007G210900 Sobic004G205500--Sobic002G367300 Sobic002G348700 Sobic002G348700 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic008G086200 Sobic008G086200 Sobic004G205500--Sobic008G086200 Sobic004G259101--Sobic001G258100 Sobic004G259101--Sobic002G072700 Sobic004G259101--Sobic004G154600 Sobic009G159600 Sobic009G159600 Sobic004G259101--Sobic009G159600 Sobic001G267800 Sobic001G267800 Sobic004G259101--Sobic001G267800 Sobic004G259101--Sobic009G259500 Sobic010G010900 Sobic010G010900 Sobic004G259101--Sobic010G010900 Sobic001G514400 Sobic001G514400 Sobic004G259101--Sobic001G514400 Sobic009G248900 Sobic009G248900 Sobic004G259101--Sobic009G248900 Sobic003G420800 Sobic003G420800 Sobic007G210900--Sobic003G420800 Sobic007G210900--Sobic004G154600 Sobic007G210900--Sobic004G199700 Sobic002G002100 Sobic002G002100 Sobic007G210900--Sobic002G002100 Sobic007G210900--Sobic002G348700 Sobic007G210900--Sobic004G205500 Sobic006G167300 Sobic006G167300 Sobic007G210900--Sobic006G167300 Sobic008G190500 Sobic008G190500 Sobic007G210900--Sobic008G190500 Sobic002G179700 Sobic002G179700 Sobic007G210900--Sobic002G179700 Sobic004G199700--Sobic009G259500 Sobic004G199700--Sobic002G216600 Sobic004G199700--Sobic003G174900 Sobic001G361800 Sobic001G361800 Sobic004G199700--Sobic001G361800 Sobic004G199700--Sobic002G348700 Sobic004G199700--Sobic002G072700 Sobic004G199700--Sobic005G204100 Sobic004G199700--Sobic007G210900 Sobic004G199700--Sobic004G154600 Sobic007G189400 Sobic007G189400 Sobic002G072700--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic002G072700--Sobic001G228100 Sobic005G029700 Sobic005G029700 Sobic002G072700--Sobic005G029700 Sobic002G072700--Sobic005G204100 Sobic002G139800 Sobic002G139800 Sobic002G072700--Sobic002G139800 Sobic002G072700--Sobic007G142900 Sobic001G221900 Sobic001G221900 Sobic002G072700--Sobic001G221900 Sobic002G072700--Sobic009G259500 Sobic006G247700 Sobic006G247700 Sobic002G072700--Sobic006G247700 Sobic003G174900--Sobic004G199700 Sobic003G174900--Sobic002G216600 Sobic003G174900--Sobic009G259500 Sobic003G174900--Sobic001G361800 Sobic003G174900--Sobic001G258100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic003G174900--Sobic008G086200 Sobic003G174900--Sobic004G205500 Sobic002G367300--Sobic006G262600 Sobic010G091700 Sobic010G091700 Sobic002G367300--Sobic010G091700 Sobic001G184400 Sobic001G184400 Sobic002G367300--Sobic001G184400 Sobic009G011500 Sobic009G011500 Sobic002G367300--Sobic009G011500 Sobic003G380500 Sobic003G380500 Sobic002G367300--Sobic003G380500 Sobic002G367300--Sobic004G154600 Sobic002G367300--Sobic004G199700 Sobic002G367300--Sobic003G174900 Sobic002G367300--Sobic004G205500 Sobic002G007200 Sobic002G007200 Sobic006G262600--Sobic002G007200 Sobic006G262600--Sobic003G380500 Sobic006G133600 Sobic006G133600 Sobic006G262600--Sobic006G133600 Sobic006G262600--Sobic002G367300 Sobic001G049600 Sobic001G049600 Sobic006G262600--Sobic001G049600 Sobic006G262600--Sobic004G154600 Sobic002G250400 Sobic002G250400 Sobic006G262600--Sobic002G250400 Sobic004G250700 Sobic004G250700 Sobic006G262600--Sobic004G250700 Sobic009G059600 Sobic009G059600 Sobic006G262600--Sobic009G059600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.