Gene annotation
Transcriptome id Sobic.002G316000.1
Synonym Sb02g034510
Functional annotation expressed protein
UniProt C5X9Z2
Pfam PF04520
Panther DB PTHR33083 PTHR33083:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04630 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os07g32810.1 : expressed protein
MaizeGDB (Corn) Zm00025a048208
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G208500 - -
2 Sobic.002G047100 - -
3 Sobic.004G154600 expressed protein -
4 Sobic.003G038000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
5 Sobic.007G115000 - -
6 Sobic.001G184400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR55 - Auxin-responsive SAUR gene family member, expressed -
7 Sobic.010G091700 "PGL2/OsBUL1(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659932)@helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
9 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
10 Sobic.006G104400 expressed protein -
11 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
12 Sobic.007G121400 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
13 Sobic.009G259500 receptor protein kinase CLAVATA1 precursor, putative, expressed -
14 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
15 Sobic.004G205500 expressed protein -
16 Sobic.004G286900 - -
17 Sobic.006G062400 Leucine Rich Repeat family protein, expressed -
18 Sobic.010G123500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
19 Sobic.010G173900 expressed protein -
20 Sobic.009G109101 - -


Gene co-expression network
sample Sobic002G316000 Sobic002G316000 Sobic010G208500 Sobic010G208500 Sobic002G316000--Sobic010G208500 Sobic002G047100 Sobic002G047100 Sobic002G316000--Sobic002G047100 Sobic004G154600 Sobic004G154600 Sobic002G316000--Sobic004G154600 Sobic003G038000 Sobic003G038000 Sobic002G316000--Sobic003G038000 Sobic007G115000 Sobic007G115000 Sobic002G316000--Sobic007G115000 Sobic001G184400 Sobic001G184400 Sobic002G316000--Sobic001G184400 Sobic010G091700 Sobic010G091700 Sobic002G316000--Sobic010G091700 Sobic004G193800 Sobic004G193800 Sobic002G316000--Sobic004G193800 Sobic003G424100 Sobic003G424100 Sobic002G316000--Sobic003G424100 Sobic006G132200 Sobic006G132200 Sobic010G208500--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic010G208500--Sobic008G108900 Sobic010G208500--Sobic003G424100 Sobic002G062300 Sobic002G062300 Sobic010G208500--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic010G208500--Sobic005G212600 Sobic009G109101 Sobic009G109101 Sobic010G208500--Sobic009G109101 Sobic009G196700 Sobic009G196700 Sobic010G208500--Sobic009G196700 Sobic009G113600 Sobic009G113600 Sobic010G208500--Sobic009G113600 Sobic010G208500--Sobic007G115000 Sobic008G049000 Sobic008G049000 Sobic002G047100--Sobic008G049000 Sobic001G132500 Sobic001G132500 Sobic002G047100--Sobic001G132500 Sobic002G047100--Sobic006G132200 Sobic002G047100--Sobic003G038000 Sobic007G066050 Sobic007G066050 Sobic002G047100--Sobic007G066050 Sobic003G219000 Sobic003G219000 Sobic002G047100--Sobic003G219000 Sobic002G318900 Sobic002G318900 Sobic002G047100--Sobic002G318900 Sobic008G167100 Sobic008G167100 Sobic002G047100--Sobic008G167100 Sobic008G091900 Sobic008G091900 Sobic002G047100--Sobic008G091900 Sobic009G259500 Sobic009G259500 Sobic004G154600--Sobic009G259500 Sobic004G205500 Sobic004G205500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic007G210900 Sobic007G210900 Sobic004G154600--Sobic007G210900 Sobic004G199700 Sobic004G199700 Sobic004G154600--Sobic004G199700 Sobic002G072700 Sobic002G072700 Sobic004G154600--Sobic002G072700 Sobic003G174900 Sobic003G174900 Sobic004G154600--Sobic003G174900 Sobic002G367300 Sobic002G367300 Sobic004G154600--Sobic002G367300 Sobic006G262600 Sobic006G262600 Sobic004G154600--Sobic006G262600 Sobic003G038000--Sobic002G047100 Sobic003G038000--Sobic006G132200 Sobic003G038000--Sobic010G208500 Sobic003G038000--Sobic007G066050 Sobic009G197200 Sobic009G197200 Sobic003G038000--Sobic009G197200 Sobic003G038000--Sobic001G132500 Sobic003G038000--Sobic002G318900 Sobic004G240900 Sobic004G240900 Sobic003G038000--Sobic004G240900 Sobic003G038000--Sobic003G424100 Sobic007G115000--Sobic005G212600 Sobic002G285200 Sobic002G285200 Sobic007G115000--Sobic002G285200 Sobic001G253100 Sobic001G253100 Sobic007G115000--Sobic001G253100 Sobic007G115000--Sobic008G091900 Sobic007G115000--Sobic006G132200 Sobic007G115000--Sobic002G062300 Sobic004G164650 Sobic004G164650 Sobic007G115000--Sobic004G164650 Sobic008G036500 Sobic008G036500 Sobic007G115000--Sobic008G036500 Sobic005G117801 Sobic005G117801 Sobic007G115000--Sobic005G117801 Sobic002G049000 Sobic002G049000 Sobic001G184400--Sobic002G049000 Sobic001G184400--Sobic010G091700 Sobic001G184400--Sobic002G367300 Sobic002G090400 Sobic002G090400 Sobic001G184400--Sobic002G090400 Sobic001G184400--Sobic010G208500 Sobic002G297800 Sobic002G297800 Sobic001G184400--Sobic002G297800 Sobic005G195700 Sobic005G195700 Sobic001G184400--Sobic005G195700 Sobic001G393401 Sobic001G393401 Sobic001G184400--Sobic001G393401 Sobic001G422366 Sobic001G422366 Sobic001G184400--Sobic001G422366 Sobic006G020500 Sobic006G020500 Sobic010G091700--Sobic006G020500 Sobic007G094600 Sobic007G094600 Sobic010G091700--Sobic007G094600 Sobic010G091700--Sobic001G184400 Sobic001G247800 Sobic001G247800 Sobic010G091700--Sobic001G247800 Sobic002G314600 Sobic002G314600 Sobic010G091700--Sobic002G314600 Sobic010G091700--Sobic002G367300 Sobic010G091700--Sobic010G208500 Sobic006G020600 Sobic006G020600 Sobic010G091700--Sobic006G020600 Sobic002G051400 Sobic002G051400 Sobic010G091700--Sobic002G051400 Sobic003G185250 Sobic003G185250 Sobic004G193800--Sobic003G185250 Sobic004G016500 Sobic004G016500 Sobic004G193800--Sobic004G016500 Sobic004G193800--Sobic003G424100 Sobic008G068800 Sobic008G068800 Sobic004G193800--Sobic008G068800 Sobic007G099500 Sobic007G099500 Sobic004G193800--Sobic007G099500 Sobic003G023400 Sobic003G023400 Sobic004G193800--Sobic003G023400 Sobic004G193800--Sobic004G240900 Sobic004G193800--Sobic010G208500 Sobic004G169501 Sobic004G169501 Sobic004G193800--Sobic004G169501 Sobic004G164600 Sobic004G164600 Sobic003G424100--Sobic004G164600 Sobic001G046600 Sobic001G046600 Sobic003G424100--Sobic001G046600 Sobic004G212800 Sobic004G212800 Sobic003G424100--Sobic004G212800 Sobic003G424100--Sobic004G240900 Sobic007G073400 Sobic007G073400 Sobic003G424100--Sobic007G073400 Sobic009G059600 Sobic009G059600 Sobic003G424100--Sobic009G059600 Sobic003G424100--Sobic007G099500 Sobic003G424100--Sobic004G016500 Sobic003G424100--Sobic008G068800
Octagon: transcription factors


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