Gene annotation
Transcriptome id Sobic.009G259500.2,Sobic.009G259500.3,Sobic.009G259500.1
Synonym FAS3, FLO5, CLV1, ATCLV1, Sb09g030870
Functional annotation receptor protein kinase CLAVATA1 precursor, putative, expressed
UniProt C5YX32 , A0A1B6PAH2
Pfam PF08263 PF00560 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF11
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0472Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G20270 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os05g51740.1 : receptor protein kinase CLAVATA1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a033734 , Zm00025a004854 , Zm00025a036022 , Zm00025a020124 , Zm00025a006146 , Zm00025a017428 , Zm00025a018497 , Zm00025a001429 , Zm00025a012726 , Zm00025a011296 , Zm00025a014170 , Zm00025a030297 , Zm00025a032161 , Zm00025a019005 , Zm00025a008603 , Zm00025a044967 , Zm00025a029520 , Zm00025a056619 , Zm00025a030142 , Zm00025a053530 , Zm00025a029517 , Zm00025a025101 , Zm00025a047387 , Zm00025a000606
Brachypodium KQK00546 , KQJ86265 , PNT63860 , PNT72055 , KQK19123 , KQK22738 , KQJ88871 , KQK16712 , PNT73106 , KQJ85665 , KQJ95505 , KQJ98144
Barley HORVU4Hr1G065620.3 , HORVU4Hr1G065620.2 , HORVU4Hr1G065620.1 , HORVU0Hr1G022670.4 , HORVU0Hr1G022670.1 , HORVU0Hr1G022670.3 , HORVU0Hr1G022670.2 , HORVU1Hr1G004690.7 , HORVU1Hr1G004690.4 , HORVU1Hr1G004690.1 , HORVU7Hr1G048140.2 , HORVU7Hr1G048140.4 , HORVU7Hr1G048140.5 , HORVU7Hr1G048140.3 , HORVU7Hr1G048140.6 , HORVU4Hr1G015710.1 , HORVU4Hr1G015710.2 , HORVU4Hr1G015710.3 , HORVU4Hr1G015710.4 , HORVU4Hr1G015710.5 , HORVU4Hr1G015710.6 , HORVU1Hr1G095340.6 , HORVU1Hr1G095340.4 , HORVU1Hr1G095340.5 , HORVU1Hr1G095340.2 , HORVU1Hr1G095340.3 , HORVU1Hr1G095340.1 , HORVU4Hr1G079040.2 , HORVU4Hr1G079040.1 , HORVU4Hr1G066310.10 , HORVU4Hr1G066310.11 , HORVU1Hr1G025040.3 , HORVU3Hr1G017020.15 , HORVU2Hr1G020420.1 , HORVU2Hr1G020420.2 , HORVU2Hr1G020420.3 , HORVU2Hr1G020420.4 , HORVU3Hr1G017020.16 , HORVU1Hr1G039400.3 , HORVU1Hr1G039400.2 , HORVU1Hr1G039400.1 , HORVU3Hr1G017020.36 , HORVU4Hr1G066310.2 , HORVU4Hr1G066310.8 , HORVU4Hr1G066310.9 , HORVU1Hr1G025040.4 , HORVU1Hr1G025040.5 , HORVU1Hr1G025040.2 , HORVU1Hr1G025040.1 , HORVU1Hr1G039500.6 , HORVU1Hr1G039500.4 , HORVU1Hr1G039500.5 , HORVU1Hr1G039500.2 , HORVU1Hr1G039500.3 , HORVU1Hr1G039500.1 , HORVU3Hr1G064110.10 , HORVU3Hr1G064110.12 , HORVU3Hr1G017020.24 , HORVU3Hr1G017020.22 , HORVU3Hr1G017020.23 , HORVU3Hr1G017020.21 , HORVU5Hr1G107330.2 , HORVU5Hr1G107330.1 , HORVU3Hr1G064110.5 , HORVU5Hr1G001920.3 , HORVU5Hr1G001920.2 , HORVU5Hr1G001920.1 , HORVU3Hr1G017020.1 , HORVU3Hr1G017020.8
Wheat TraesCS2B02G138400 , TraesCS1B02G167400 , TraesCS1B02G167500 , TraesCS1D02G452700 , TraesCS1A02G149500 , TraesCS1A02G444500 , TraesCS7A02G533800 , TraesCS1A02G149400 , TraesCS7D02G521200 , TraesCS7D02G521200 , TraesCS1D02G146700 , TraesCS4B02G238700 , TraesCS4A02G224800 , TraesCS4B02G234600 , TraesCS2A02G118300 , TraesCS1B02G479300 , TraesCS1B02G479300 , TraesCS2D02G116700 , TraesCS1B02G134100 , TraesCS4A02G062000 , TraesCS4D02G235800 , TraesCS1A02G113800 , TraesCS4A02G059000 , TraesCS4B02G091400 , TraesCS4D02G088400 , TraesCS1D02G146800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G204100 kelch repeat protein, putative, expressed -
2 Sobic.002G216600 "DEP1(Ortholog in rice:Huang et al., 2009(PubMedID : 31659854)@keratin-associated protein 5-4, putative, expressed -
3 Sobic.004G154600 expressed protein -
4 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
5 Sobic.004G199700 expressed protein -
6 Sobic.007G142900 receptor-like kinase, putative, expressed -
7 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
8 Sobic.003G174900 fimbrin-like protein 2, putative, expressed K17336: plastin-3
9 Sobic.003G300200 expressed protein -
10 Sobic.004G259101 - -
11 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -
12 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
13 Sobic.006G153500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP25 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
14 Sobic.004G168600 heat shock protein-related, putative, expressed -
15 Sobic.010G010900 expressed protein -
16 Sobic.002G367300 "qGW7/GL7(Ortholog in rice:Wang et al., 2015a(PubMedID : 31659862)@expressed protein -
17 Sobic.002G348700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carboxyl-terminal peptidase, putative, expressed -
18 Sobic.008G001300 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
19 Sobic.004G052800 DUF640 domain containing protein, putative, expressed -
20 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -


Gene co-expression network
sample Sobic009G259500 Sobic009G259500 Sobic005G204100 Sobic005G204100 Sobic009G259500--Sobic005G204100 Sobic002G216600 Sobic002G216600 Sobic009G259500--Sobic002G216600 Sobic004G154600 Sobic004G154600 Sobic009G259500--Sobic004G154600 Sobic002G072700 Sobic002G072700 Sobic009G259500--Sobic002G072700 Sobic004G199700 Sobic004G199700 Sobic009G259500--Sobic004G199700 Sobic007G142900 Sobic007G142900 Sobic009G259500--Sobic007G142900 Sobic001G258100 Sobic001G258100 Sobic009G259500--Sobic001G258100 Sobic003G174900 Sobic003G174900 Sobic009G259500--Sobic003G174900 Sobic003G300200 Sobic003G300200 Sobic009G259500--Sobic003G300200 Sobic005G204100--Sobic002G216600 Sobic005G204100--Sobic009G259500 Sobic005G204100--Sobic002G072700 Sobic005G204100--Sobic007G142900 Sobic002G098500 Sobic002G098500 Sobic005G204100--Sobic002G098500 Sobic001G221900 Sobic001G221900 Sobic005G204100--Sobic001G221900 Sobic001G384700 Sobic001G384700 Sobic005G204100--Sobic001G384700 Sobic006G272500 Sobic006G272500 Sobic005G204100--Sobic006G272500 Sobic007G189400 Sobic007G189400 Sobic005G204100--Sobic007G189400 Sobic002G216600--Sobic005G204100 Sobic002G216600--Sobic001G384700 Sobic004G144100 Sobic004G144100 Sobic002G216600--Sobic004G144100 Sobic002G216600--Sobic009G259500 Sobic002G216600--Sobic004G199700 Sobic001G079900 Sobic001G079900 Sobic002G216600--Sobic001G079900 Sobic009G141700 Sobic009G141700 Sobic002G216600--Sobic009G141700 Sobic002G216600--Sobic003G174900 Sobic002G348700 Sobic002G348700 Sobic002G216600--Sobic002G348700 Sobic004G154600--Sobic009G259500 Sobic004G205500 Sobic004G205500 Sobic004G154600--Sobic004G205500 Sobic004G259101 Sobic004G259101 Sobic004G154600--Sobic004G259101 Sobic007G210900 Sobic007G210900 Sobic004G154600--Sobic007G210900 Sobic004G154600--Sobic004G199700 Sobic004G154600--Sobic002G072700 Sobic004G154600--Sobic003G174900 Sobic002G367300 Sobic002G367300 Sobic004G154600--Sobic002G367300 Sobic006G262600 Sobic006G262600 Sobic004G154600--Sobic006G262600 Sobic002G072700--Sobic007G189400 Sobic001G228100 Sobic001G228100 Sobic002G072700--Sobic001G228100 Sobic005G029700 Sobic005G029700 Sobic002G072700--Sobic005G029700 Sobic002G072700--Sobic005G204100 Sobic002G139800 Sobic002G139800 Sobic002G072700--Sobic002G139800 Sobic002G072700--Sobic007G142900 Sobic002G072700--Sobic001G221900 Sobic002G072700--Sobic009G259500 Sobic006G247700 Sobic006G247700 Sobic002G072700--Sobic006G247700 Sobic004G199700--Sobic009G259500 Sobic004G199700--Sobic002G216600 Sobic004G199700--Sobic003G174900 Sobic001G361800 Sobic001G361800 Sobic004G199700--Sobic001G361800 Sobic004G199700--Sobic002G348700 Sobic004G199700--Sobic002G072700 Sobic004G199700--Sobic005G204100 Sobic004G199700--Sobic007G210900 Sobic004G199700--Sobic004G154600 Sobic007G142900--Sobic002G072700 Sobic007G142900--Sobic005G204100 Sobic007G142900--Sobic009G259500 Sobic007G142900--Sobic007G189400 Sobic007G142900--Sobic002G216600 Sobic004G168600 Sobic004G168600 Sobic007G142900--Sobic004G168600 Sobic008G136100 Sobic008G136100 Sobic007G142900--Sobic008G136100 Sobic010G180800 Sobic010G180800 Sobic007G142900--Sobic010G180800 Sobic006G201600 Sobic006G201600 Sobic007G142900--Sobic006G201600 Sobic001G258100--Sobic004G259101 Sobic001G258100--Sobic009G259500 Sobic001G258100--Sobic003G174900 Sobic001G258100--Sobic002G072700 Sobic010G010900 Sobic010G010900 Sobic001G258100--Sobic010G010900 Sobic001G258100--Sobic004G168600 Sobic001G258100--Sobic007G142900 Sobic001G267800 Sobic001G267800 Sobic001G258100--Sobic001G267800 Sobic001G514400 Sobic001G514400 Sobic001G258100--Sobic001G514400 Sobic003G174900--Sobic004G199700 Sobic003G174900--Sobic002G216600 Sobic003G174900--Sobic009G259500 Sobic003G174900--Sobic001G361800 Sobic003G174900--Sobic001G258100 Sobic003G174900--Sobic005G204100 Sobic003G174900--Sobic002G348700 Sobic008G086200 Sobic008G086200 Sobic003G174900--Sobic008G086200 Sobic003G174900--Sobic004G205500 Sobic003G300200--Sobic001G267800 Sobic001G434100 Sobic001G434100 Sobic003G300200--Sobic001G434100 Sobic003G300200--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic003G300200--Sobic009G141300 Sobic003G300200--Sobic005G204100 Sobic003G300200--Sobic002G139800 Sobic003G300200--Sobic001G221900 Sobic003G300200--Sobic010G010900 Sobic003G300200--Sobic007G189400
Octagon: transcription factors


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