Gene annotation
Transcriptome id Sobic.006G272500.1
Synonym Sb06g033400
Functional annotation "PKc_like super family, protein kjinases, catalytic domain" (PubMedID : 29491869)
expressed protein
UniProt C5YAN8
Pfam PF13855 PF08263 PF07714
Panther DB PTHR27000 PTHR27000:SF133
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G63430 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os04g58700.1 : expressed protein
MaizeGDB (Corn) Zm00025a009245 , Zm00025a024814
Brachypodium KQJ85391 , KQJ85392
Barley HORVU2Hr1G124010.18 , HORVU2Hr1G124010.19 , HORVU2Hr1G124010.11 , HORVU2Hr1G124010.12 , HORVU2Hr1G124010.13 , HORVU2Hr1G124010.14 , HORVU2Hr1G124010.15 , HORVU2Hr1G124010.16 , HORVU2Hr1G124010.17 , HORVU2Hr1G124010.8 , HORVU2Hr1G124010.9 , HORVU2Hr1G124010.2 , HORVU2Hr1G124010.3 , HORVU2Hr1G124010.1 , HORVU2Hr1G124010.6 , HORVU2Hr1G124010.7 , HORVU2Hr1G124010.4 , HORVU2Hr1G124010.5 , HORVU2Hr1G124010.20 , HORVU2Hr1G124010.10
Wheat TraesCS1D02G031300 , TraesCS2B02G607000 , TraesCS2A02G580000 , TraesCS2A02G580000 , TraesCS2D02G599300 , TraesCS2D02G599300
Populus -


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cDNA sequences
Sobic.006G272500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G285200 protein transport protein-related, putative, expressed -
3 Sobic.002G293700 ATXR, putative, expressed -
4 Sobic.010G010900 expressed protein -
5 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
6 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
7 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
8 Sobic.002G370400 expressed protein -
9 Sobic.008G148500 expressed protein -
10 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
11 Sobic.002G074000 expressed protein -
12 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
13 Sobic.005G021900 expressed protein -
14 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
15 Sobic.002G162000 - -
16 Sobic.001G008300 expressed protein -
17 Sobic.003G031700 protein kinase family protein, putative, expressed -
18 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
19 Sobic.004G168600 heat shock protein-related, putative, expressed -
20 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G272500 Sobic006G272500 Sobic009G124800 Sobic009G124800 Sobic006G272500--Sobic009G124800 Sobic001G285200 Sobic001G285200 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic010G010900 Sobic010G010900 Sobic006G272500--Sobic010G010900 Sobic002G419200 Sobic002G419200 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic002G370400 Sobic002G370400 Sobic006G272500--Sobic002G370400 Sobic008G148500 Sobic008G148500 Sobic006G272500--Sobic008G148500 Sobic009G124800--Sobic006G272500 Sobic009G124800--Sobic002G293700 Sobic001G074100 Sobic001G074100 Sobic009G124800--Sobic001G074100 Sobic009G124800--Sobic001G296100 Sobic001G381100 Sobic001G381100 Sobic009G124800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic009G124800--Sobic006G241800 Sobic010G211800 Sobic010G211800 Sobic009G124800--Sobic010G211800 Sobic009G124800--Sobic002G370400 Sobic004G115700 Sobic004G115700 Sobic009G124800--Sobic004G115700 Sobic001G285200--Sobic002G419200 Sobic001G201000 Sobic001G201000 Sobic001G285200--Sobic001G201000 Sobic001G285200--Sobic006G272500 Sobic005G055600 Sobic005G055600 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic001G285200--Sobic010G211800 Sobic009G175100 Sobic009G175100 Sobic001G285200--Sobic009G175100 Sobic002G293700--Sobic006G272500 Sobic002G293700--Sobic009G124800 Sobic006G257200 Sobic006G257200 Sobic002G293700--Sobic006G257200 Sobic002G293700--Sobic006G241800 Sobic002G071850 Sobic002G071850 Sobic002G293700--Sobic002G071850 Sobic002G293700--Sobic001G285200 Sobic002G293700--Sobic002G370400 Sobic008G169400 Sobic008G169400 Sobic002G293700--Sobic008G169400 Sobic003G031700 Sobic003G031700 Sobic002G293700--Sobic003G031700 Sobic001G488900 Sobic001G488900 Sobic010G010900--Sobic001G488900 Sobic010G010900--Sobic006G272500 Sobic003G309400 Sobic003G309400 Sobic010G010900--Sobic003G309400 Sobic010G010900--Sobic002G419200 Sobic003G300400 Sobic003G300400 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic001G267800 Sobic001G267800 Sobic010G010900--Sobic001G267800 Sobic002G032500 Sobic002G032500 Sobic010G010900--Sobic002G032500 Sobic010G010900--Sobic002G071850 Sobic002G419200--Sobic003G300400 Sobic002G419200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic002G419200--Sobic003G116100 Sobic002G419200--Sobic003G309400 Sobic002G419200--Sobic003G277200 Sobic002G419200--Sobic001G285200 Sobic002G419200--Sobic002G032500 Sobic004G248100 Sobic004G248100 Sobic002G419200--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic002G419200--Sobic003G339600 Sobic001G296100--Sobic006G272500 Sobic001G499200 Sobic001G499200 Sobic001G296100--Sobic001G499200 Sobic001G296100--Sobic009G124800 Sobic006G142500 Sobic006G142500 Sobic001G296100--Sobic006G142500 Sobic003G283600 Sobic003G283600 Sobic001G296100--Sobic003G283600 Sobic001G290500 Sobic001G290500 Sobic001G296100--Sobic001G290500 Sobic004G315700 Sobic004G315700 Sobic001G296100--Sobic004G315700 Sobic001G487200 Sobic001G487200 Sobic001G296100--Sobic001G487200 Sobic001G372900 Sobic001G372900 Sobic001G296100--Sobic001G372900 Sobic003G089300 Sobic003G089300 Sobic007G160300--Sobic003G089300 Sobic003G070600 Sobic003G070600 Sobic007G160300--Sobic003G070600 Sobic006G058000 Sobic006G058000 Sobic007G160300--Sobic006G058000 Sobic010G020600 Sobic010G020600 Sobic007G160300--Sobic010G020600 Sobic001G074000 Sobic001G074000 Sobic007G160300--Sobic001G074000 Sobic007G160300--Sobic003G309400 Sobic001G155700 Sobic001G155700 Sobic007G160300--Sobic001G155700 Sobic004G357000 Sobic004G357000 Sobic007G160300--Sobic004G357000 Sobic001G493900 Sobic001G493900 Sobic007G160300--Sobic001G493900 Sobic002G370400--Sobic001G487200 Sobic001G231200 Sobic001G231200 Sobic002G370400--Sobic001G231200 Sobic002G370400--Sobic004G315700 Sobic002G370400--Sobic006G272500 Sobic009G212100 Sobic009G212100 Sobic002G370400--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic002G370400--Sobic001G296800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic002G370400--Sobic010G211800 Sobic002G393200 Sobic002G393200 Sobic008G148500--Sobic002G393200 Sobic008G148500--Sobic006G272500 Sobic001G361800 Sobic001G361800 Sobic008G148500--Sobic001G361800 Sobic008G148500--Sobic001G285200 Sobic008G148500--Sobic008G192700 Sobic008G148500--Sobic009G124800 Sobic008G148500--Sobic002G370400 Sobic008G148500--Sobic010G010900 Sobic008G148500--Sobic009G175100
Octagon: transcription factors


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