Gene annotation
Transcriptome id Sobic.008G148500.1
Synonym Sb08g019870
Functional annotation expressed protein
UniProt C5YQW6
Pfam -
Panther DB PTHR14237 PTHR14237:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23520 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os12g40010.2 : expressed protein
MaizeGDB (Corn) Zm00025a008305 , Zm00025a004490
Brachypodium KQJ86036
Barley HORVU6Hr1G093650.1 , HORVU5Hr1G017830.18 , HORVU5Hr1G017830.19 , HORVU5Hr1G017830.14 , HORVU0Hr1G009070.1 , HORVU5Hr1G017830.17 , HORVU2Hr1G125770.1 , HORVU4Hr1G072380.1 , HORVU4Hr1G072380.2 , HORVU4Hr1G072380.3 , HORVU5Hr1G017830.20
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G393200 CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
3 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
4 Sobic.001G285200 protein transport protein-related, putative, expressed -
5 Sobic.008G192700 ATMAP70 protein, putative, expressed -
6 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.002G370400 expressed protein -
8 Sobic.010G010900 expressed protein -
9 Sobic.009G175100 inactive receptor kinase At2g26730 precursor, putative, expressed -
10 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
11 Sobic.009G242501 - -
12 Sobic.002G162000 - -
13 Sobic.007G196000 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11844: ubiquitin carboxyl-terminal hydrolase 16/45
14 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
16 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
17 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
18 Sobic.005G021900 expressed protein -
19 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
20 Sobic.001G231200 expressed protein -


Gene co-expression network
sample Sobic008G148500 Sobic008G148500 Sobic002G393200 Sobic002G393200 Sobic008G148500--Sobic002G393200 Sobic006G272500 Sobic006G272500 Sobic008G148500--Sobic006G272500 Sobic001G361800 Sobic001G361800 Sobic008G148500--Sobic001G361800 Sobic001G285200 Sobic001G285200 Sobic008G148500--Sobic001G285200 Sobic008G192700 Sobic008G192700 Sobic008G148500--Sobic008G192700 Sobic009G124800 Sobic009G124800 Sobic008G148500--Sobic009G124800 Sobic002G370400 Sobic002G370400 Sobic008G148500--Sobic002G370400 Sobic010G010900 Sobic010G010900 Sobic008G148500--Sobic010G010900 Sobic009G175100 Sobic009G175100 Sobic008G148500--Sobic009G175100 Sobic002G393200--Sobic008G148500 Sobic006G254500 Sobic006G254500 Sobic002G393200--Sobic006G254500 Sobic005G204700 Sobic005G204700 Sobic002G393200--Sobic005G204700 Sobic004G152200 Sobic004G152200 Sobic002G393200--Sobic004G152200 Sobic002G161700 Sobic002G161700 Sobic002G393200--Sobic002G161700 Sobic003G131200 Sobic003G131200 Sobic002G393200--Sobic003G131200 Sobic009G206500 Sobic009G206500 Sobic002G393200--Sobic009G206500 Sobic002G143200 Sobic002G143200 Sobic002G393200--Sobic002G143200 Sobic006G267500 Sobic006G267500 Sobic002G393200--Sobic006G267500 Sobic006G272500--Sobic009G124800 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic006G272500--Sobic010G010900 Sobic002G419200 Sobic002G419200 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic006G272500--Sobic002G370400 Sobic006G272500--Sobic008G148500 Sobic004G199700 Sobic004G199700 Sobic001G361800--Sobic004G199700 Sobic001G361800--Sobic008G148500 Sobic003G174900 Sobic003G174900 Sobic001G361800--Sobic003G174900 Sobic001G361800--Sobic006G272500 Sobic002G072700 Sobic002G072700 Sobic001G361800--Sobic002G072700 Sobic009G259500 Sobic009G259500 Sobic001G361800--Sobic009G259500 Sobic009G175200 Sobic009G175200 Sobic001G361800--Sobic009G175200 Sobic005G054700 Sobic005G054700 Sobic001G361800--Sobic005G054700 Sobic001G361800--Sobic009G124800 Sobic001G285200--Sobic002G419200 Sobic001G201000 Sobic001G201000 Sobic001G285200--Sobic001G201000 Sobic001G285200--Sobic006G272500 Sobic005G055600 Sobic005G055600 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic010G211800 Sobic010G211800 Sobic001G285200--Sobic010G211800 Sobic001G285200--Sobic009G175100 Sobic008G192700--Sobic001G285200 Sobic008G015200 Sobic008G015200 Sobic008G192700--Sobic008G015200 Sobic010G049300 Sobic010G049300 Sobic008G192700--Sobic010G049300 Sobic002G074000 Sobic002G074000 Sobic008G192700--Sobic002G074000 Sobic008G192700--Sobic008G148500 Sobic008G192700--Sobic006G272500 Sobic008G192700--Sobic002G419200 Sobic001G507200 Sobic001G507200 Sobic008G192700--Sobic001G507200 Sobic001G026800 Sobic001G026800 Sobic008G192700--Sobic001G026800 Sobic009G124800--Sobic006G272500 Sobic009G124800--Sobic002G293700 Sobic001G074100 Sobic001G074100 Sobic009G124800--Sobic001G074100 Sobic009G124800--Sobic001G296100 Sobic001G381100 Sobic001G381100 Sobic009G124800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic009G124800--Sobic006G241800 Sobic009G124800--Sobic010G211800 Sobic009G124800--Sobic002G370400 Sobic004G115700 Sobic004G115700 Sobic009G124800--Sobic004G115700 Sobic001G487200 Sobic001G487200 Sobic002G370400--Sobic001G487200 Sobic001G231200 Sobic001G231200 Sobic002G370400--Sobic001G231200 Sobic004G315700 Sobic004G315700 Sobic002G370400--Sobic004G315700 Sobic002G370400--Sobic006G272500 Sobic009G212100 Sobic009G212100 Sobic002G370400--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic002G370400--Sobic001G296800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic002G370400--Sobic010G211800 Sobic001G488900 Sobic001G488900 Sobic010G010900--Sobic001G488900 Sobic010G010900--Sobic006G272500 Sobic003G309400 Sobic003G309400 Sobic010G010900--Sobic003G309400 Sobic010G010900--Sobic002G419200 Sobic003G300400 Sobic003G300400 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic001G267800 Sobic001G267800 Sobic010G010900--Sobic001G267800 Sobic002G032500 Sobic002G032500 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850 Sobic007G063100 Sobic007G063100 Sobic009G175100--Sobic007G063100 Sobic006G193100 Sobic006G193100 Sobic009G175100--Sobic006G193100 Sobic009G175100--Sobic005G055600 Sobic009G175100--Sobic001G026800 Sobic007G116800 Sobic007G116800 Sobic009G175100--Sobic007G116800 Sobic004G102200 Sobic004G102200 Sobic009G175100--Sobic004G102200 Sobic004G328300 Sobic004G328300 Sobic009G175100--Sobic004G328300 Sobic009G175100--Sobic001G285200 Sobic003G031700 Sobic003G031700 Sobic009G175100--Sobic003G031700
Octagon: transcription factors


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